RNA–Protein interactions for RNA: ENST00000246957.9

TRAP1-201, Transcript of TNF receptor associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAP1, Length 2,296 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-201ENST00000246957 SLC9A4Q6AI14 798 aa13.43□□□□□ -0.26
TRAP1-201ENST00000246957 TMCO3Q6UWJ1 677 aa13.43□□□□□ -0.26
TRAP1-201ENST00000246957 LRRC31Q6UY01 552 aa13.43□□□□□ -0.26
TRAP1-201ENST00000246957 OTOP3Q7RTS5 596 aa13.43□□□□□ -0.26
TRAP1-201ENST00000246957 ZNF354CQ86Y25 554 aa13.43□□□□□ -0.26
TRAP1-201ENST00000246957 FAM217AQ8IXS0 508 aa13.43□□□□□ -0.26
TRAP1-201ENST00000246957 RASGEF1CQ8N431 466 aa13.43□□□□□ -0.26
TRAP1-201ENST00000246957 TMEM121Q9BTD3 319 aa13.43□□□□□ -0.26
TRAP1-201ENST00000246957 HEBP1Q9NRV9 189 aa13.43□□□□□ -0.26
TRAP1-201ENST00000246957 ABCB8Q9NUT2 735 aa13.43□□□□□ -0.26
TRAP1-201ENST00000246957 EPS15L1Q9UBC2 864 aa13.43□□□□□ -0.26
TRAP1-201ENST00000246957 CDC23Q9UJX2 597 aa13.43□□□□□ -0.26
TRAP1-201ENST00000246957 INTS6Q9UL03 887 aaKnown RBP13.43□□□□□ -0.26
TRAP1-201ENST00000246957 SDK1Q7Z5N4 2213 aa13.43□□□□□ -0.26
TRAP1-201ENST00000246957 DOCK9Q9BZ29 2069 aa13.43□□□□□ -0.26
TRAP1-201ENST00000246957 DRGXA6NNA5 263 aa13.43□□□□□ -0.26
TRAP1-201ENST00000246957 ANHXE9PGG2 379 aa13.43□□□□□ -0.26
TRAP1-201ENST00000246957 H0Y626 953 aa13.43□□□□□ -0.26
TRAP1-201ENST00000246957 KCNK1O00180 336 aa13.43□□□□□ -0.26
TRAP1-201ENST00000246957 PGRMC1O00264 195 aaKnown RBP13.43□□□□□ -0.26
TRAP1-201ENST00000246957 APOL1O14791 398 aa13.43□□□□□ -0.26
TRAP1-201ENST00000246957 ZSCAN5DPP0CG00 497 aa13.43□□□□□ -0.26
TRAP1-201ENST00000246957 VAV1P15498 845 aa13.43□□□□□ -0.26
TRAP1-201ENST00000246957 TCP1P17987 556 aaKnown RBP13.43□□□□□ -0.26
TRAP1-201ENST00000246957 CSKP41240 450 aa13.43□□□□□ -0.26
TRAP1-201ENST00000246957 RNF135Q8IUD6 432 aa13.43□□□□□ -0.26
TRAP1-201ENST00000246957 MFN1Q8IWA4 741 aa13.43□□□□□ -0.26
TRAP1-201ENST00000246957 MAP7D3Q8IWC1 876 aa13.43□□□□□ -0.26
TRAP1-201ENST00000246957 SLC44A3Q8N4M1 653 aa13.43□□□□□ -0.26
TRAP1-201ENST00000246957 ZNF366Q8N895 744 aa13.43□□□□□ -0.26
TRAP1-201ENST00000246957 RTL3Q8N8U3 475 aaKnown RBP13.43□□□□□ -0.26
TRAP1-201ENST00000246957 USP33Q8TEY7 942 aa13.43□□□□□ -0.26
TRAP1-201ENST00000246957 ELSPBP1Q96BH3 223 aa13.43□□□□□ -0.26
TRAP1-201ENST00000246957 RPL10LQ96L21 214 aaKnown RBP13.43□□□□□ -0.26
TRAP1-201ENST00000246957 ECT2Q9H8V3 914 aa13.43□□□□□ -0.26
TRAP1-201ENST00000246957 TRPV4Q9HBA0 871 aa13.43□□□□□ -0.26
TRAP1-201ENST00000246957 POLR3BQ9NW08 1133 aaPredicted RBP13.43□□□□□ -0.26
TRAP1-201ENST00000246957 NUMA1Q14980 2115 aa13.42□□□□□ -0.26
TRAP1-201ENST00000246957 ZSCAN5CA6NGD5 496 aaPredicted RBP13.42□□□□□ -0.26
TRAP1-201ENST00000246957 KRIT1O00522 736 aa13.42□□□□□ -0.26
TRAP1-201ENST00000246957 MT-CO1P00395 513 aa13.42□□□□□ -0.26
TRAP1-201ENST00000246957 HOXC13P31276 330 aa13.42□□□□□ -0.26
TRAP1-201ENST00000246957 STK19P49842 368 aaPredicted RBP13.42□□□□□ -0.26
TRAP1-201ENST00000246957 LMAN2Q12907 356 aa13.42□□□□□ -0.26
TRAP1-201ENST00000246957 GEN1Q17RS7 908 aa13.42□□□□□ -0.26
TRAP1-201ENST00000246957 RNF219Q5W0B1 726 aaPredicted RBP13.42□□□□□ -0.26
TRAP1-201ENST00000246957 BBS12Q6ZW61 710 aa13.42□□□□□ -0.26
TRAP1-201ENST00000246957 CALR3Q96L12 384 aaKnown RBP13.42□□□□□ -0.26
TRAP1-201ENST00000246957 SPON2Q9BUD6 331 aa13.42□□□□□ -0.26
TRAP1-201ENST00000246957 TRMT61BQ9BVS5 477 aaKnown RBP13.42□□□□□ -0.26
TRAP1-201ENST00000246957 MTG2Q9H4K7 406 aa13.42□□□□□ -0.26
TRAP1-201ENST00000246957 GON4LQ3T8J9 2241 aa13.42□□□□□ -0.26
TRAP1-201ENST00000246957 K7ERQ8 282 aa13.42□□□□□ -0.26
TRAP1-201ENST00000246957 VPS41P49754 854 aa13.42□□□□□ -0.26
TRAP1-201ENST00000246957 PAPOLAP51003 745 aaKnown RBP13.42□□□□□ -0.26
TRAP1-201ENST00000246957 AIF1P55008 147 aa13.42□□□□□ -0.26
TRAP1-201ENST00000246957 CDH18Q13634 790 aa13.42□□□□□ -0.26
TRAP1-201ENST00000246957 YAF2Q8IY57 180 aa13.42□□□□□ -0.26
TRAP1-201ENST00000246957 NXPE3Q969Y0 559 aa13.42□□□□□ -0.26
TRAP1-201ENST00000246957 PBKQ96KB5 322 aa13.42□□□□□ -0.26
TRAP1-201ENST00000246957 DCLK3Q9C098 648 aa13.42□□□□□ -0.26
TRAP1-201ENST00000246957 BRD9Q9H8M2 597 aa13.42□□□□□ -0.26
TRAP1-201ENST00000246957 LCMT1Q9UIC8 334 aa13.42□□□□□ -0.26
TRAP1-201ENST00000246957 LUC7L3O95232 432 aaKnown RBP13.41□□□□□ -0.26
TRAP1-201ENST00000246957 ADH5P11766 374 aa13.41□□□□□ -0.26
TRAP1-201ENST00000246957 ETFBP38117 255 aa13.41□□□□□ -0.26
TRAP1-201ENST00000246957 ZP2Q05996 745 aa13.41□□□□□ -0.26
TRAP1-201ENST00000246957 TRADDQ15628 312 aa13.41□□□□□ -0.26
TRAP1-201ENST00000246957 PPP2R5EQ16537 467 aa13.41□□□□□ -0.26
TRAP1-201ENST00000246957 PSTKQ8IV42 348 aaKnown RBP13.41□□□□□ -0.26
TRAP1-201ENST00000246957 CCNYQ8ND76 341 aa13.41□□□□□ -0.26
TRAP1-201ENST00000246957 ACTRT1Q8TDG2 376 aa13.41□□□□□ -0.26
TRAP1-201ENST00000246957 CYB5D2Q8WUJ1 264 aa13.41□□□□□ -0.26
TRAP1-201ENST00000246957 EXOC2Q96KP1 924 aa13.41□□□□□ -0.26
TRAP1-201ENST00000246957 KRT12Q99456 494 aa13.41□□□□□ -0.26
TRAP1-201ENST00000246957 LRRC19Q9H756 370 aa13.41□□□□□ -0.26
TRAP1-201ENST00000246957 DNAJC17Q9NVM6 304 aaKnown RBP13.41□□□□□ -0.26
TRAP1-201ENST00000246957 TMEM248Q9NWD8 314 aa13.41□□□□□ -0.26
TRAP1-201ENST00000246957 SEPT10Q9P0V9 454 aa13.41□□□□□ -0.26
TRAP1-201ENST00000246957 THEGQ9P2T0 379 aa13.41□□□□□ -0.26
TRAP1-201ENST00000246957 AMACRQ9UHK6 382 aa13.41□□□□□ -0.26
TRAP1-201ENST00000246957 MYLKQ15746 1914 aa13.41□□□□□ -0.26
TRAP1-201ENST00000246957 A0A1B0GVM2 712 aa13.41□□□□□ -0.26
TRAP1-201ENST00000246957 TCAF2A6NFQ2 919 aa13.41□□□□□ -0.26
TRAP1-201ENST00000246957 RIOK3O14730 519 aaKnown RBP13.41□□□□□ -0.26
TRAP1-201ENST00000246957 TULP3O75386 442 aa13.41□□□□□ -0.26
TRAP1-201ENST00000246957 RHOQP17081 205 aa13.41□□□□□ -0.26
TRAP1-201ENST00000246957 RBL1P28749 1068 aa13.41□□□□□ -0.26
TRAP1-201ENST00000246957 GJA4P35212 333 aa13.41□□□□□ -0.26
TRAP1-201ENST00000246957 CHKAP35790 457 aa13.41□□□□□ -0.26
TRAP1-201ENST00000246957 SLC7A5Q01650 507 aa13.41□□□□□ -0.26
TRAP1-201ENST00000246957 AP1B1Q10567 949 aa13.41□□□□□ -0.26
TRAP1-201ENST00000246957 RUNX3Q13761 415 aa13.41□□□□□ -0.26
TRAP1-201ENST00000246957 FUT11Q495W5 492 aa13.41□□□□□ -0.26
TRAP1-201ENST00000246957 RABGAP1LQ5R372 815 aa13.41□□□□□ -0.26
TRAP1-201ENST00000246957 EMC10Q5UCC4 262 aa13.41□□□□□ -0.26
TRAP1-201ENST00000246957 DDX42Q86XP3 938 aaKnown RBP eCLIP13.41□□□□□ -0.26
TRAP1-201ENST00000246957 HJURPQ8NCD3 748 aaPredicted RBP13.41□□□□□ -0.26
TRAP1-201ENST00000246957 SPATA4Q8NEY3 305 aa13.41□□□□□ -0.26
TRAP1-201ENST00000246957 P3H4Q92791 437 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms