RNA–Protein interactions for RNA: ENST00000239666.8

PDZD11-201, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD11, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-201ENST00000239666 FAM71AQ8IYT1 594 aa13.15□□□□□ -0.3
PDZD11-201ENST00000239666 LGI2Q8N0V4 545 aa13.15□□□□□ -0.3
PDZD11-201ENST00000239666 MINDY1Q8N5J2 469 aa13.15□□□□□ -0.3
PDZD11-201ENST00000239666 ENOX1Q8TC92 643 aaKnown RBP13.15□□□□□ -0.3
PDZD11-201ENST00000239666 SLC2A13Q96QE2 648 aa13.15□□□□□ -0.3
PDZD11-201ENST00000239666 STK33Q9BYT3 514 aa13.15□□□□□ -0.3
PDZD11-201ENST00000239666 RSPH9Q9H1X1 276 aaPredicted RBP13.15□□□□□ -0.3
PDZD11-201ENST00000239666 RETREG1Q9H6L5 497 aa13.15□□□□□ -0.3
PDZD11-201ENST00000239666 WDCPQ9H6R7 721 aa13.15□□□□□ -0.3
PDZD11-201ENST00000239666 PRSS16Q9NQE7 514 aa13.15□□□□□ -0.3
PDZD11-201ENST00000239666 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.14□□□□□ -0.31
PDZD11-201ENST00000239666 GOLGA6L7A0A1B0GV03 622 aa13.14□□□□□ -0.31
PDZD11-201ENST00000239666 LRRC72A6NJI9 287 aa13.14□□□□□ -0.31
PDZD11-201ENST00000239666 BECN2A8MW95 431 aa13.14□□□□□ -0.31
PDZD11-201ENST00000239666 KCNJ18B7U540 433 aa13.14□□□□□ -0.31
PDZD11-201ENST00000239666 FOXN3O00409 490 aaPredicted RBP13.14□□□□□ -0.31
PDZD11-201ENST00000239666 CLDN11O75508 207 aa13.14□□□□□ -0.31
PDZD11-201ENST00000239666 FBXO45P0C2W1 286 aa13.14□□□□□ -0.31
PDZD11-201ENST00000239666 CD70P32970 193 aa13.14□□□□□ -0.31
PDZD11-201ENST00000239666 NUDT1P36639 197 aa13.14□□□□□ -0.31
PDZD11-201ENST00000239666 CSKP41240 450 aa13.14□□□□□ -0.31
PDZD11-201ENST00000239666 MATKP42679 507 aa13.14□□□□□ -0.31
PDZD11-201ENST00000239666 KRT83P78385 493 aa13.14□□□□□ -0.31
PDZD11-201ENST00000239666 ZNF252P-AS1Q0IIN9 211 aa13.14□□□□□ -0.31
PDZD11-201ENST00000239666 ZNF177Q13360 481 aaPredicted RBP13.14□□□□□ -0.31
PDZD11-201ENST00000239666 EIF4EBP2Q13542 120 aaPredicted RBP13.14□□□□□ -0.31
PDZD11-201ENST00000239666 KCNJ12Q14500 433 aa13.14□□□□□ -0.31
PDZD11-201ENST00000239666 ZNF423Q2M1K9 1284 aa13.14□□□□□ -0.31
PDZD11-201ENST00000239666 TCP11X2Q5H9J9 407 aa13.14□□□□□ -0.31
PDZD11-201ENST00000239666 PITRM1Q5JRX3 1037 aa13.14□□□□□ -0.31
PDZD11-201ENST00000239666 FAM46CQ5VWP2 391 aa13.14□□□□□ -0.31
PDZD11-201ENST00000239666 SASS6Q6UVJ0 657 aa13.14□□□□□ -0.31
PDZD11-201ENST00000239666 ARCQ7LC44 396 aa13.14□□□□□ -0.31
PDZD11-201ENST00000239666 ERICH1Q86X53 443 aa13.14□□□□□ -0.31
PDZD11-201ENST00000239666 DEFB106AQ8N104 65 aa13.14□□□□□ -0.31
PDZD11-201ENST00000239666 DEFB119Q8N690 84 aa13.14□□□□□ -0.31
PDZD11-201ENST00000239666 GANCQ8TET4 914 aa13.14□□□□□ -0.31
PDZD11-201ENST00000239666 CYB5D2Q8WUJ1 264 aa13.14□□□□□ -0.31
PDZD11-201ENST00000239666 C18orf8Q96DM3 657 aa13.14□□□□□ -0.31
PDZD11-201ENST00000239666 PGAP3Q96FM1 320 aaPredicted RBP13.14□□□□□ -0.31
PDZD11-201ENST00000239666 CCDC114Q96M63 670 aa13.14□□□□□ -0.31
PDZD11-201ENST00000239666 OMDQ99983 421 aa13.14□□□□□ -0.31
PDZD11-201ENST00000239666 PLCB1Q9NQ66 1216 aa13.14□□□□□ -0.31
PDZD11-201ENST00000239666 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.14□□□□□ -0.31
PDZD11-201ENST00000239666 SLC25A13Q9UJS0 675 aa13.14□□□□□ -0.31
PDZD11-201ENST00000239666 FZD4Q9ULV1 537 aa13.14□□□□□ -0.31
PDZD11-201ENST00000239666 ERVW-1Q9UQF0 538 aa13.14□□□□□ -0.31
PDZD11-201ENST00000239666 NCOR2Q9Y618 2525 aa13.14□□□□□ -0.31
PDZD11-201ENST00000239666 SPTBN2O15020 2390 aa13.14□□□□□ -0.31
PDZD11-201ENST00000239666 ITIH6Q6UXX5 1313 aa13.13□□□□□ -0.31
PDZD11-201ENST00000239666 CACNA1EQ15878 2313 aa13.13□□□□□ -0.31
PDZD11-201ENST00000239666 TMEM8BA6NDV4 472 aa13.13□□□□□ -0.31
PDZD11-201ENST00000239666 DAB1O75553 588 aa13.13□□□□□ -0.31
PDZD11-201ENST00000239666 SEMA4FO95754 770 aa13.13□□□□□ -0.31
PDZD11-201ENST00000239666 CCDC172P0C7W6 258 aa13.13□□□□□ -0.31
PDZD11-201ENST00000239666 DESP17661 470 aa13.13□□□□□ -0.31
PDZD11-201ENST00000239666 C5AR1P21730 350 aa13.13□□□□□ -0.31
PDZD11-201ENST00000239666 CDH5P33151 784 aaPredicted RBP13.13□□□□□ -0.31
PDZD11-201ENST00000239666 GABRB2P47870 512 aa13.13□□□□□ -0.31
PDZD11-201ENST00000239666 RPS14P62263 151 aaKnown RBP13.13□□□□□ -0.31
PDZD11-201ENST00000239666 RPS24P62847 133 aaKnown RBP13.13□□□□□ -0.31
PDZD11-201ENST00000239666 VAC14Q08AM6 782 aa13.13□□□□□ -0.31
PDZD11-201ENST00000239666 RAPGEF1Q13905 1077 aa13.13□□□□□ -0.31
PDZD11-201ENST00000239666 ELAVL3Q14576 367 aaKnown RBP13.13□□□□□ -0.31
PDZD11-201ENST00000239666 DRAP1Q14919 205 aaPredicted RBP13.13□□□□□ -0.31
PDZD11-201ENST00000239666 INAVAQ3KP66 663 aa13.13□□□□□ -0.31
PDZD11-201ENST00000239666 DPCR1Q3MIW9 517 aa13.13□□□□□ -0.31
PDZD11-201ENST00000239666 SLC45A4Q5BKX6 768 aa13.13□□□□□ -0.31
PDZD11-201ENST00000239666 KLHDC7AQ5VTJ3 777 aa13.13□□□□□ -0.31
PDZD11-201ENST00000239666 RAP1GAP2Q684P5 730 aa13.13□□□□□ -0.31
PDZD11-201ENST00000239666 NADSYN1Q6IA69 706 aa13.13□□□□□ -0.31
PDZD11-201ENST00000239666 ADAM32Q8TC27 787 aa13.13□□□□□ -0.31
PDZD11-201ENST00000239666 SORCS1Q8WY21 1168 aa13.13□□□□□ -0.31
PDZD11-201ENST00000239666 C1orf74Q96LT6 269 aa13.13□□□□□ -0.31
PDZD11-201ENST00000239666 RPRD1AQ96P16 312 aaPredicted RBP13.13□□□□□ -0.31
PDZD11-201ENST00000239666 CPXM1Q96SM3 734 aa13.13□□□□□ -0.31
PDZD11-201ENST00000239666 NUCKS1Q9H1E3 243 aaKnown RBP13.13□□□□□ -0.31
PDZD11-201ENST00000239666 MIR1-1HGQ9H1L0 117 aa13.13□□□□□ -0.31
PDZD11-201ENST00000239666 ANO10Q9NW15 660 aa13.13□□□□□ -0.31
PDZD11-201ENST00000239666 PCDHGB2Q9Y5G2 931 aa13.13□□□□□ -0.31
PDZD11-201ENST00000239666 ATXN2Q99700 1313 aaKnown RBP13.13□□□□□ -0.31
PDZD11-201ENST00000239666 LAMA1P25391 3075 aa13.12□□□□□ -0.31
PDZD11-201ENST00000239666 PCNX2A6NKB5 2137 aa13.12□□□□□ -0.31
PDZD11-201ENST00000239666 M0QYT0 321 aa13.12□□□□□ -0.31
PDZD11-201ENST00000239666 ALOX15BO15296 676 aa13.12□□□□□ -0.31
PDZD11-201ENST00000239666 MAGEC1O60732 1142 aa13.12□□□□□ -0.31
PDZD11-201ENST00000239666 MBD3O95983 291 aa13.12□□□□□ -0.31
PDZD11-201ENST00000239666 HLA-EP13747 358 aa13.12□□□□□ -0.31
PDZD11-201ENST00000239666 UCHL3P15374 230 aa13.12□□□□□ -0.31
PDZD11-201ENST00000239666 CYP11B1P15538 503 aa13.12□□□□□ -0.31
PDZD11-201ENST00000239666 VARSP26640 1264 aaKnown RBP13.12□□□□□ -0.31
PDZD11-201ENST00000239666 CD27P26842 260 aa13.12□□□□□ -0.31
PDZD11-201ENST00000239666 GRIA4P48058 902 aa13.12□□□□□ -0.31
PDZD11-201ENST00000239666 CDH4P55283 916 aa13.12□□□□□ -0.31
PDZD11-201ENST00000239666 SYCP1Q15431 976 aa13.12□□□□□ -0.31
PDZD11-201ENST00000239666 PPP1R2P3Q6NXS1 205 aa13.12□□□□□ -0.31
PDZD11-201ENST00000239666 GJB7Q6PEY0 223 aa13.12□□□□□ -0.31
PDZD11-201ENST00000239666 OLFML1Q6UWY5 402 aa13.12□□□□□ -0.31
PDZD11-201ENST00000239666 TRIM72Q6ZMU5 477 aa13.12□□□□□ -0.31
PDZD11-201ENST00000239666 PIP4P1Q86T03 277 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms