RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 TRIM38O00635 465 aa11.23□□□□□ -0.61
CCDC170-201ENST00000239374 DAB1O75553 588 aa11.23□□□□□ -0.61
CCDC170-201ENST00000239374 VNN1O95497 513 aa11.23□□□□□ -0.61
CCDC170-201ENST00000239374 GOT1P17174 413 aa11.23□□□□□ -0.61
CCDC170-201ENST00000239374 IL1R2P27930 398 aa11.23□□□□□ -0.61
CCDC170-201ENST00000239374 RAP1GDS1P52306 607 aa11.23□□□□□ -0.61
CCDC170-201ENST00000239374 TREML1Q86YW5 311 aa11.23□□□□□ -0.61
CCDC170-201ENST00000239374 DHRSXQ8N5I4 330 aa11.23□□□□□ -0.61
CCDC170-201ENST00000239374 RMDN1Q96DB5 314 aa11.23□□□□□ -0.61
CCDC170-201ENST00000239374 SLC25A23Q9BV35 468 aa11.23□□□□□ -0.61
CCDC170-201ENST00000239374 PTTG2Q9NZH5 202 aa11.23□□□□□ -0.61
CCDC170-201ENST00000239374 AAR2Q9Y312 384 aaKnown RBP11.23□□□□□ -0.61
CCDC170-201ENST00000239374 TRAFD1O14545 582 aaPredicted RBP11.23□□□□□ -0.61
CCDC170-201ENST00000239374 T-ENOLP0DO92 83 aa11.23□□□□□ -0.61
CCDC170-201ENST00000239374 SERPINB1P30740 379 aa11.23□□□□□ -0.61
CCDC170-201ENST00000239374 IDH3AP50213 366 aa11.23□□□□□ -0.61
CCDC170-201ENST00000239374 CYP51A1Q16850 503 aa11.23□□□□□ -0.61
CCDC170-201ENST00000239374 DALRD3Q5D0E6 543 aaKnown RBP11.23□□□□□ -0.61
CCDC170-201ENST00000239374 METTL7BQ6UX53 244 aa11.23□□□□□ -0.61
CCDC170-201ENST00000239374 ERO1BQ86YB8 467 aa11.23□□□□□ -0.61
CCDC170-201ENST00000239374 EGFL8Q99944 293 aa11.23□□□□□ -0.61
CCDC170-201ENST00000239374 ATXN3LQ9H3M9 355 aa11.23□□□□□ -0.61
CCDC170-201ENST00000239374 POMKQ9H5K3 350 aa11.23□□□□□ -0.61
CCDC170-201ENST00000239374 PLGRKTQ9HBL7 147 aa11.23□□□□□ -0.61
CCDC170-201ENST00000239374 LRP6O75581 1613 aa11.23□□□□□ -0.61
CCDC170-201ENST00000239374 CD151P48509 253 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 EIF2B2P49770 351 aaKnown RBP11.22□□□□□ -0.61
CCDC170-201ENST00000239374 TUBP50607 506 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 PRKAA2P54646 552 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 ADIGQ0VDE8 80 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 TSTA3Q13630 321 aaPredicted RBP11.22□□□□□ -0.61
CCDC170-201ENST00000239374 ZNF470Q6ECI4 717 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 SPATA6LQ8N4H0 392 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 FAM47BQ8NA70 645 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 GIPC3Q8TF64 312 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 KCTD4Q8WVF5 259 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 SKA1Q96BD8 255 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 SPON2Q9BUD6 331 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 ASB7Q9H672 318 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 TMEM216Q9P0N5 145 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 DNAJB4Q9UDY4 337 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 PARP4Q9UKK3 1724 aaKnown RBP11.22□□□□□ -0.61
CCDC170-201ENST00000239374 C2P06681 752 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 PGK2P07205 417 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 RBP1P09455 135 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 TAF6P49848 677 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 OGDHQ02218 1023 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 KIZQ2M2Z5 673 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 EEF1DP3Q658K8 133 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 ANGPTL8Q6UXH0 198 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 FAM83AQ86UY5 434 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 ACO2Q99798 780 aaKnown RBP11.22□□□□□ -0.61
CCDC170-201ENST00000239374 SDCBP2Q9H190 292 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 LHX5Q9H2C1 402 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 PTPRHQ9HD43 1115 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 XPNPEP1Q9NQW7 623 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 RNF19AQ9NV58 838 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 CCDC189A1A4V9 331 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 NEK2P51955 445 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 LPIN1Q14693 890 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 CAMK1DQ8IU85 385 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 MICU2Q8IYU8 434 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 CIB1Q99828 191 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 TMEM165Q9HC07 324 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 PNPLA3Q9NST1 481 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 HACD3Q9P035 362 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 PAPSS1O43252 624 aaPredicted RBP11.22□□□□□ -0.61
CCDC170-201ENST00000239374 ZNF235Q14590 738 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 OSBPL11Q9BXB4 747 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 POLR1BQ9H9Y6 1135 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 MORF4L1Q9UBU8 362 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 TJP2Q9UDY2 1190 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 DAPK2Q9UIK4 370 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 TMEM114B3SHH9 223 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 B4GALT5O43286 388 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 IREB2P48200 963 aaKnown RBP11.22□□□□□ -0.61
CCDC170-201ENST00000239374 CLK1P49759 484 aaKnown RBP11.22□□□□□ -0.61
CCDC170-201ENST00000239374 SCNN1BP51168 640 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 MRPS15P82914 257 aaKnown RBP11.22□□□□□ -0.61
CCDC170-201ENST00000239374 CHRNB3Q05901 458 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 PSTKQ8IV42 348 aaKnown RBP11.22□□□□□ -0.61
CCDC170-201ENST00000239374 ZNF781Q8N8C0 355 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 TERB1Q8NA31 727 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 AGBL3Q8NEM8 1001 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 FIZ1Q96SL8 496 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 NTPCRQ9BSD7 190 aaKnown RBP11.22□□□□□ -0.61
CCDC170-201ENST00000239374 C17orf80Q9BSJ5 609 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 PIM2Q9P1W9 311 aa11.22□□□□□ -0.61
CCDC170-201ENST00000239374 ITM2AO43736 263 aa11.21□□□□□ -0.61
CCDC170-201ENST00000239374 APOA1P02647 267 aa11.21□□□□□ -0.61
CCDC170-201ENST00000239374 CCDC130P13994 396 aa11.21□□□□□ -0.61
CCDC170-201ENST00000239374 HNRNPLP14866 589 aaKnown RBP eCLIP11.21□□□□□ -0.61
CCDC170-201ENST00000239374 NPY2RP49146 381 aa11.21□□□□□ -0.61
CCDC170-201ENST00000239374 GEMP55040 296 aa11.21□□□□□ -0.61
CCDC170-201ENST00000239374 FSTL1Q12841 308 aa11.21□□□□□ -0.61
CCDC170-201ENST00000239374 ITGADQ13349 1161 aa11.21□□□□□ -0.61
CCDC170-201ENST00000239374 SFT2D3Q587I9 215 aa11.21□□□□□ -0.61
CCDC170-201ENST00000239374 C1orf220Q5T0J3 134 aa11.21□□□□□ -0.61
CCDC170-201ENST00000239374 NBPF12Q5TAG4 269 aaPredicted RBP11.21□□□□□ -0.61
CCDC170-201ENST00000239374 GPR107Q5VW38 600 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms