RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 ROGDIQ9GZN7 287 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 ATP13A1Q9HD20 1204 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 AMACRQ9UHK6 382 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 TAF6LQ9Y6J9 622 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 AP3D1O14617 1153 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 SUPT7LO94864 414 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 PFKMP08237 780 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 PPIBP23284 216 aaKnown RBP7.56□□□□□ -1.2
MED28-201ENST00000237380 ALDH9A1P49189 494 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 PNLIPRP1P54315 467 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 CBX3Q13185 183 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 FAM98BQ52LJ0 330 aaKnown RBP7.56□□□□□ -1.2
MED28-201ENST00000237380 ARSJQ5FYB0 599 aaPredicted RBP7.56□□□□□ -1.2
MED28-201ENST00000237380 ZC3H14Q6PJT7 736 aaKnown RBP7.56□□□□□ -1.2
MED28-201ENST00000237380 SCIMPQ6UWF3 145 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 TRAPPC5Q8IUR0 188 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 ACOT12Q8WYK0 555 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 MRIQ9BWK5 157 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 CDH7Q9ULB5 785 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 IFNGP01579 166 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 FGBP02675 491 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 WEE2P0C1S8 567 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 PNMA6AP0CW24 399 aaPredicted RBP7.56□□□□□ -1.2
MED28-201ENST00000237380 ZBTB48P10074 688 aaPredicted RBP7.56□□□□□ -1.2
MED28-201ENST00000237380 PTPRNQ16849 979 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 GPIHBP1Q8IV16 184 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 KIAA2013Q8IYS2 634 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 SAMD14Q8IZD0 417 aaPredicted RBP7.56□□□□□ -1.2
MED28-201ENST00000237380 TRIM63Q969Q1 353 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 KIFC1Q9BW19 673 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 WHRNQ9P202 907 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 UNCXA6NJT0 531 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 DDX3XO00571 662 aaKnown RBP eCLIP7.56□□□□□ -1.22e-17■■■□□ 19.1
MED28-201ENST00000237380 KMOO15229 486 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 SLC35G4P0C7Q5 338 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 DCKP27707 260 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 EXOSC10Q01780 885 aaKnown RBP7.56□□□□□ -1.2
MED28-201ENST00000237380 LAMTOR4Q0VGL1 99 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 CERCAMQ5T4B2 595 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 CDADC1Q9BWV3 514 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 STRADBQ9C0K7 418 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 CKLFQ9UBR5 152 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 DERAQ9Y315 318 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 GZMAP12544 262 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 IL1R1P14778 569 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 AGXTP21549 392 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 PSMC6P62333 389 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 PPARDQ03181 441 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 LAPTM5Q13571 262 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 MDH1BQ5I0G3 518 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 DCLRE1AQ6PJP8 1040 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 EPHX4Q8IUS5 362 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 CPA5Q8WXQ8 436 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 TRIM9Q9C026 710 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 HPS5Q9UPZ3 1129 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 RBM7Q9Y580 266 aaKnown RBP7.56□□□□□ -1.2
MED28-201ENST00000237380 ZNF536O15090 1300 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 NBNO60934 754 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 WBP4O75554 376 aaKnown RBP7.56□□□□□ -1.2
MED28-201ENST00000237380 CAMTA2O94983 1202 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 RFC2P35250 354 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 TKTL1P51854 596 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 MRPS6P82932 125 aaKnown RBP7.56□□□□□ -1.2
MED28-201ENST00000237380 SMCO1Q147U7 214 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 TCHHL1Q5QJ38 904 aaPredicted RBP7.56□□□□□ -1.2
MED28-201ENST00000237380 TMEM26Q6ZUK4 368 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 RIOX2Q8IUF8 465 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 ATG4CQ96DT6 458 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 PHPT1Q9NRX4 125 aaPredicted RBP7.56□□□□□ -1.2
MED28-201ENST00000237380 RPS6KA6Q9UK32 745 aa7.56□□□□□ -1.2
MED28-201ENST00000237380 SALL1Q9NSC2 1324 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 ARHGAP23Q9P227 1491 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 SNX4O95219 450 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 UCHL3P15374 230 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 PDPK2PQ6A1A2 396 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 KIAA1143Q96AT1 154 aaPredicted RBP7.55□□□□□ -1.2
MED28-201ENST00000237380 ATP6V1G3Q96LB4 118 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 SPRTNQ9H040 489 aaPredicted RBP7.55□□□□□ -1.2
MED28-201ENST00000237380 RASSF1Q9NS23 344 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 TRPS1Q9UHF7 1281 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 CDC14AQ9UNH5 594 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 SLC12A4Q9UP95 1085 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 GATBO75879 557 aaKnown RBP7.55□□□□□ -1.2
MED28-201ENST00000237380 BMP7P18075 431 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 COPAP53621 1224 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 MSLNQ13421 630 aaPredicted RBP7.55□□□□□ -1.2
MED28-201ENST00000237380 FAXCQ5TGI0 409 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 UNC93AQ86WB7 457 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 IFNLR1Q8IU57 520 aaPredicted RBP7.55□□□□□ -1.2
MED28-201ENST00000237380 HIPK4Q8NE63 616 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 ACE2Q9BYF1 805 aaPredicted RBP7.55□□□□□ -1.2
MED28-201ENST00000237380 INTS13Q9NVM9 706 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 GMEB2Q9UKD1 530 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 OR10H1Q9Y4A9 318 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 GPSM3Q9Y4H4 160 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 TYMPP19971 482 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 CCNA2P20248 432 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 SELENOVP59797 346 aa7.55□□□□□ -1.2
MED28-201ENST00000237380 SF3B4Q15427 424 aaKnown RBP eCLIP7.55□□□□□ -1.26e-7■□□□□ 9.1
MED28-201ENST00000237380 NOMO2Q5JPE7 1267 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms