RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 ASLP04424 464 aa11.62□□□□□ -0.55
SF3B6-201ENST00000233468 TMEM253P0C7T8 217 aa11.62□□□□□ -0.55
SF3B6-201ENST00000233468 PABPC1P11940 636 aaKnown RBP11.62□□□□□ -0.55
SF3B6-201ENST00000233468 HNRNPLP14866 589 aaKnown RBP eCLIP11.62□□□□□ -0.55
SF3B6-201ENST00000233468 POLR2EP19388 210 aaKnown RBP11.62□□□□□ -0.55
SF3B6-201ENST00000233468 TFE3P19532 575 aaPredicted RBP11.62□□□□□ -0.55
SF3B6-201ENST00000233468 HTR7P34969 479 aa11.62□□□□□ -0.55
SF3B6-201ENST00000233468 PCK1P35558 622 aa11.62□□□□□ -0.55
SF3B6-201ENST00000233468 DGKEP52429 567 aa11.62□□□□□ -0.55
SF3B6-201ENST00000233468 ZNF135P52742 658 aaPredicted RBP11.62□□□□□ -0.55
SF3B6-201ENST00000233468 GALCP54803 685 aa11.62□□□□□ -0.55
SF3B6-201ENST00000233468 HDAC4P56524 1084 aa11.62□□□□□ -0.55
SF3B6-201ENST00000233468 GSDMDP57764 484 aa11.62□□□□□ -0.55
SF3B6-201ENST00000233468 NRG1Q02297 640 aaPredicted RBP11.62□□□□□ -0.55
SF3B6-201ENST00000233468 SULT2A1Q06520 285 aa11.62□□□□□ -0.55
SF3B6-201ENST00000233468 SCAPQ12770 1279 aa11.62□□□□□ -0.55
SF3B6-201ENST00000233468 C5orf22Q49AR2 442 aa11.62□□□□□ -0.55
SF3B6-201ENST00000233468 C6orf118Q5T5N4 469 aa11.62□□□□□ -0.55
SF3B6-201ENST00000233468 NAIF1Q69YI7 327 aaPredicted RBP11.62□□□□□ -0.55
SF3B6-201ENST00000233468 HEATR6Q6AI08 1181 aaKnown RBP11.62□□□□□ -0.55
SF3B6-201ENST00000233468 TRNP1Q6NT89 227 aa11.62□□□□□ -0.55
SF3B6-201ENST00000233468 PSTKQ8IV42 348 aaKnown RBP11.62□□□□□ -0.55
SF3B6-201ENST00000233468 CHPFQ8IZ52 775 aa11.62□□□□□ -0.55
SF3B6-201ENST00000233468 CCAR2Q8N163 923 aaKnown RBP11.62□□□□□ -0.55
SF3B6-201ENST00000233468 CFAP52Q8N1V2 620 aa11.62□□□□□ -0.55
SF3B6-201ENST00000233468 TXLNBQ8N3L3 684 aa11.62□□□□□ -0.55
SF3B6-201ENST00000233468 ANP32BQ92688 251 aaKnown RBP11.62□□□□□ -0.55
SF3B6-201ENST00000233468 PRICKLE1Q96MT3 831 aaPredicted RBP11.62□□□□□ -0.55
SF3B6-201ENST00000233468 CHP1Q99653 195 aa11.62□□□□□ -0.55
SF3B6-201ENST00000233468 NUP85Q9BW27 656 aa11.62□□□□□ -0.55
SF3B6-201ENST00000233468 CIPCQ9C0C6 399 aa11.62□□□□□ -0.55
SF3B6-201ENST00000233468 ZYG11BQ9C0D3 744 aa11.62□□□□□ -0.55
SF3B6-201ENST00000233468 POLMQ9NP87 494 aaPredicted RBP11.62□□□□□ -0.55
SF3B6-201ENST00000233468 ABCB8Q9NUT2 735 aa11.62□□□□□ -0.55
SF3B6-201ENST00000233468 ELOVL2Q9NXB9 296 aa11.62□□□□□ -0.55
SF3B6-201ENST00000233468 CALCOCO1Q9P1Z2 691 aa11.62□□□□□ -0.55
SF3B6-201ENST00000233468 PPARGC1AQ9UBK2 798 aaKnown RBP11.62□□□□□ -0.55
SF3B6-201ENST00000233468 OR12D3Q9UGF7 316 aa11.62□□□□□ -0.55
SF3B6-201ENST00000233468 GMEB2Q9UKD1 530 aa11.62□□□□□ -0.55
SF3B6-201ENST00000233468 CDV3Q9UKY7 258 aaKnown RBP11.62□□□□□ -0.55
SF3B6-201ENST00000233468 MMP17Q9ULZ9 603 aa11.62□□□□□ -0.55
SF3B6-201ENST00000233468 ANAPC1Q9H1A4 1944 aa11.62□□□□□ -0.55
SF3B6-201ENST00000233468 CNOT1A5YKK6 2376 aaKnown RBP11.62□□□□□ -0.55
SF3B6-201ENST00000233468 CFAP47Q6ZTR5 3102 aa11.62□□□□□ -0.55
SF3B6-201ENST00000233468 MYO16Q9Y6X6 1858 aa11.61□□□□□ -0.55
SF3B6-201ENST00000233468 GOLGA6L3A6NEY3 463 aa11.61□□□□□ -0.55
SF3B6-201ENST00000233468 DRGXA6NNA5 263 aa11.61□□□□□ -0.55
SF3B6-201ENST00000233468 E9PAM4 449 aa11.61□□□□□ -0.55
SF3B6-201ENST00000233468 K7ESF4 209 aa11.61□□□□□ -0.55
SF3B6-201ENST00000233468 NRDCO43847 1150 aa11.61□□□□□ -0.55
SF3B6-201ENST00000233468 SRGAP2O75044 1071 aa11.61□□□□□ -0.55
SF3B6-201ENST00000233468 KLF8O95600 359 aaPredicted RBP11.61□□□□□ -0.55
SF3B6-201ENST00000233468 HLA-FP30511 346 aa11.61□□□□□ -0.55
SF3B6-201ENST00000233468 NTSR1P30989 418 aa11.61□□□□□ -0.55
SF3B6-201ENST00000233468 HOXA6P31267 233 aa11.61□□□□□ -0.55
SF3B6-201ENST00000233468 NNMTP40261 264 aa11.61□□□□□ -0.55
SF3B6-201ENST00000233468 KIR2DL1P43626 348 aaPredicted RBP11.61□□□□□ -0.55
SF3B6-201ENST00000233468 ST8SIA6P61647 398 aa11.61□□□□□ -0.55
SF3B6-201ENST00000233468 LMNB2Q03252 620 aa11.61□□□□□ -0.55
SF3B6-201ENST00000233468 STARD3Q14849 445 aa11.61□□□□□ -0.55
SF3B6-201ENST00000233468 HADHQ16836 314 aaKnown RBP11.61□□□□□ -0.55
SF3B6-201ENST00000233468 BOLA3Q53S33 107 aa11.61□□□□□ -0.55
SF3B6-201ENST00000233468 RNF219Q5W0B1 726 aaPredicted RBP11.61□□□□□ -0.55
SF3B6-201ENST00000233468 ZNF783Q6ZMS7 281 aa11.61□□□□□ -0.55
SF3B6-201ENST00000233468 SETD3Q86TU7 594 aaPredicted RBP11.61□□□□□ -0.55
SF3B6-201ENST00000233468 RHOT2Q8IXI1 618 aa11.61□□□□□ -0.55
SF3B6-201ENST00000233468 GPR161Q8N6U8 529 aaKnown RBP11.61□□□□□ -0.55
SF3B6-201ENST00000233468 TXNDC5Q8NBS9 432 aaKnown RBP11.61□□□□□ -0.55
SF3B6-201ENST00000233468 TSTD1Q8NFU3 115 aa11.61□□□□□ -0.55
SF3B6-201ENST00000233468 ZNF564Q8TBZ8 553 aaPredicted RBP11.61□□□□□ -0.55
SF3B6-201ENST00000233468 CALR3Q96L12 384 aaKnown RBP11.61□□□□□ -0.55
SF3B6-201ENST00000233468 POLR3BQ9NW08 1133 aaPredicted RBP11.61□□□□□ -0.55
SF3B6-201ENST00000233468 ANAPC7Q9UJX3 599 aa11.61□□□□□ -0.55
SF3B6-201ENST00000233468 FRYQ5TBA9 3013 aa11.61□□□□□ -0.55
SF3B6-201ENST00000233468 IGLV3-10A0A075B6K4 115 aa11.6□□□□□ -0.55
SF3B6-201ENST00000233468 CCDC163A0A0D9SF12 145 aa11.6□□□□□ -0.55
SF3B6-201ENST00000233468 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.6□□□□□ -0.55
SF3B6-201ENST00000233468 PRR5-ARHGAP8B1AHC4 643 aa11.6□□□□□ -0.55
SF3B6-201ENST00000233468 PRRT4C9JH25 899 aa11.6□□□□□ -0.55
SF3B6-201ENST00000233468 TRIM24O15164 1050 aa11.6□□□□□ -0.55
SF3B6-201ENST00000233468 SYNCRIPO60506 623 aaKnown RBP11.6□□□□□ -0.55
SF3B6-201ENST00000233468 APBB3O95704 486 aa11.6□□□□□ -0.55
SF3B6-201ENST00000233468 DLDP09622 509 aaKnown RBP11.6□□□□□ -0.55
SF3B6-201ENST00000233468 L1CAMP32004 1257 aa11.6□□□□□ -0.55
SF3B6-201ENST00000233468 CNR2P34972 360 aa11.6□□□□□ -0.55
SF3B6-201ENST00000233468 ETFBP38117 255 aa11.6□□□□□ -0.55
SF3B6-201ENST00000233468 MAGEA1P43355 309 aa11.6□□□□□ -0.55
SF3B6-201ENST00000233468 SGSHP51688 502 aa11.6□□□□□ -0.55
SF3B6-201ENST00000233468 KRT83P78385 493 aa11.6□□□□□ -0.55
SF3B6-201ENST00000233468 ARHGAP8P85298 464 aa11.6□□□□□ -0.55
SF3B6-201ENST00000233468 SIM2Q14190 667 aaPredicted RBP11.6□□□□□ -0.55
SF3B6-201ENST00000233468 GEN1Q17RS7 908 aa11.6□□□□□ -0.55
SF3B6-201ENST00000233468 ERMARDQ5T6L9 678 aa11.6□□□□□ -0.55
SF3B6-201ENST00000233468 SH3PXD2AQ5TCZ1 1133 aa11.6□□□□□ -0.55
SF3B6-201ENST00000233468 MBLAC2Q68D91 279 aa11.6□□□□□ -0.55
SF3B6-201ENST00000233468 LAIR1Q6GTX8 287 aa11.6□□□□□ -0.55
SF3B6-201ENST00000233468 RWDD4Q6NW29 188 aaKnown RBP11.6□□□□□ -0.55
SF3B6-201ENST00000233468 PKN3Q6P5Z2 889 aa11.6□□□□□ -0.55
SF3B6-201ENST00000233468 KIAA0907Q7Z7F0 614 aaPredicted RBP11.6□□□□□ -0.55
SF3B6-201ENST00000233468 ALLCQ8N6M5 410 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms