RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 SYCE1Q8N0S2 351 aa24.29■■□□□ 1.48
HOMER3-201ENST00000221222 SYNPOQ8N3V7 929 aa24.29■■□□□ 1.48
HOMER3-201ENST00000221222 WFIKKN2Q8TEU8 576 aa24.29■■□□□ 1.48
HOMER3-201ENST00000221222 TSC1Q92574 1164 aa24.29■■□□□ 1.48
HOMER3-201ENST00000221222 CLDN23Q96B33 292 aa24.29■■□□□ 1.48
HOMER3-201ENST00000221222 CATSPERBQ9H7T0 1116 aa24.29■■□□□ 1.48
HOMER3-201ENST00000221222 LZTFL1Q9NQ48 299 aa24.29■■□□□ 1.48
HOMER3-201ENST00000221222 CWC15Q9P013 229 aaKnown RBP24.29■■□□□ 1.48
HOMER3-201ENST00000221222 SIT1Q9Y3P8 196 aa24.29■■□□□ 1.48
HOMER3-201ENST00000221222 CAPN6Q9Y6Q1 641 aa24.29■■□□□ 1.48
HOMER3-201ENST00000221222 TBC1D3BA6NDS4 549 aa24.28■■□□□ 1.48
HOMER3-201ENST00000221222 PALMO75781 387 aa24.28■■□□□ 1.48
HOMER3-201ENST00000221222 GOT1P17174 413 aa24.28■■□□□ 1.48
HOMER3-201ENST00000221222 OR1E1P30953 314 aa24.28■■□□□ 1.48
HOMER3-201ENST00000221222 GJC1P36383 396 aa24.28■■□□□ 1.48
HOMER3-201ENST00000221222 ARL4AP40617 200 aa24.28■■□□□ 1.48
HOMER3-201ENST00000221222 MAPKAPK2P49137 400 aa24.28■■□□□ 1.48
HOMER3-201ENST00000221222 CDH6P55285 790 aa24.28■■□□□ 1.48
HOMER3-201ENST00000221222 EIF4HQ15056 248 aaKnown RBP24.28■■□□□ 1.48
HOMER3-201ENST00000221222 PDK2Q15119 407 aa24.28■■□□□ 1.48
HOMER3-201ENST00000221222 RFX8Q6ZV50 586 aa24.28■■□□□ 1.48
HOMER3-201ENST00000221222 SFTPA1Q8IWL2 248 aa24.28■■□□□ 1.48
HOMER3-201ENST00000221222 AHI1Q8N157 1196 aa24.28■■□□□ 1.48
HOMER3-201ENST00000221222 RTL3Q8N8U3 475 aaKnown RBP24.28■■□□□ 1.48
HOMER3-201ENST00000221222 STARD13Q9Y3M8 1113 aa24.28■■□□□ 1.48
HOMER3-201ENST00000221222 PRRT4C9JH25 899 aa24.27■■□□□ 1.48
HOMER3-201ENST00000221222 H3BRJ5 948 aa24.27■■□□□ 1.48
HOMER3-201ENST00000221222 RPS9P46781 194 aaKnown RBP24.27■■□□□ 1.48
HOMER3-201ENST00000221222 PLK1P53350 603 aa24.27■■□□□ 1.48
HOMER3-201ENST00000221222 DPYSQ14117 519 aa24.27■■□□□ 1.48
HOMER3-201ENST00000221222 KRT81Q14533 505 aa24.27■■□□□ 1.48
HOMER3-201ENST00000221222 DMC1Q14565 340 aa24.27■■□□□ 1.48
HOMER3-201ENST00000221222 C6orf118Q5T5N4 469 aa24.27■■□□□ 1.48
HOMER3-201ENST00000221222 ADIPOR2Q86V24 386 aa24.27■■□□□ 1.48
HOMER3-201ENST00000221222 OR52K2Q8NGK3 314 aa24.27■■□□□ 1.48
HOMER3-201ENST00000221222 CCDC26Q8TAB7 109 aa24.27■■□□□ 1.48
HOMER3-201ENST00000221222 LMAN1LQ9HAT1 526 aa24.27■■□□□ 1.48
HOMER3-201ENST00000221222 DDX56Q9NY93 547 aaKnown RBP24.27■■□□□ 1.48
HOMER3-201ENST00000221222 INTS6Q9UL03 887 aaKnown RBP24.27■■□□□ 1.48
HOMER3-201ENST00000221222 ILVBLA1L0T0 632 aa24.26■■□□□ 1.47
HOMER3-201ENST00000221222 ZSCAN12O43309 604 aa24.26■■□□□ 1.47
HOMER3-201ENST00000221222 CHRM1P11229 460 aaPredicted RBP24.26■■□□□ 1.47
HOMER3-201ENST00000221222 IL4RP24394 825 aa24.26■■□□□ 1.47
HOMER3-201ENST00000221222 DPYSL3Q14195 570 aa24.26■■□□□ 1.47
HOMER3-201ENST00000221222 TMEM215Q68D42 235 aa24.26■■□□□ 1.47
HOMER3-201ENST00000221222 ZNF783Q6ZMS7 281 aa24.26■■□□□ 1.47
HOMER3-201ENST00000221222 NT5DC3Q86UY8 548 aa24.26■■□□□ 1.47
HOMER3-201ENST00000221222 MAP7D3Q8IWC1 876 aa24.26■■□□□ 1.47
HOMER3-201ENST00000221222 KCTD6Q8NC69 237 aa24.26■■□□□ 1.47
HOMER3-201ENST00000221222 CSPG4P5Q96PW8 444 aa24.26■■□□□ 1.47
HOMER3-201ENST00000221222 ZNF670Q9BS34 389 aa24.26■■□□□ 1.47
HOMER3-201ENST00000221222 RBM12Q9NTZ6 932 aaKnown RBP24.26■■□□□ 1.47
HOMER3-201ENST00000221222 NDFIP2Q9NV92 336 aa24.26■■□□□ 1.47
HOMER3-201ENST00000221222 DONSONQ9NYP3 566 aa24.26■■□□□ 1.47
HOMER3-201ENST00000221222 OR51B4Q9Y5P0 310 aa24.26■■□□□ 1.47
HOMER3-201ENST00000221222 USP34Q70CQ2 3546 aa24.25■■□□□ 1.47
HOMER3-201ENST00000221222 TIMM44O43615 452 aa24.25■■□□□ 1.47
HOMER3-201ENST00000221222 RHOCP08134 193 aa24.25■■□□□ 1.47
HOMER3-201ENST00000221222 CD48P09326 243 aa24.25■■□□□ 1.47
HOMER3-201ENST00000221222 KDELR1P24390 212 aa24.25■■□□□ 1.47
HOMER3-201ENST00000221222 CTNNA1P35221 906 aaKnown RBP24.25■■□□□ 1.47
HOMER3-201ENST00000221222 CSKP41240 450 aa24.25■■□□□ 1.47
HOMER3-201ENST00000221222 KIR2DL1P43626 348 aaPredicted RBP24.25■■□□□ 1.47
HOMER3-201ENST00000221222 PLEKHG6Q3KR16 790 aa24.25■■□□□ 1.47
HOMER3-201ENST00000221222 FUT11Q495W5 492 aa24.25■■□□□ 1.47
HOMER3-201ENST00000221222 VSIG1Q86XK7 387 aa24.25■■□□□ 1.47
HOMER3-201ENST00000221222 KCNV2Q8TDN2 545 aa24.25■■□□□ 1.47
HOMER3-201ENST00000221222 RAPGEF5Q92565 580 aa24.25■■□□□ 1.47
HOMER3-201ENST00000221222 ALG14Q96F25 216 aa24.25■■□□□ 1.47
HOMER3-201ENST00000221222 KLHL11Q9NVR0 708 aa24.25■■□□□ 1.47
HOMER3-201ENST00000221222 ELOVL2Q9NXB9 296 aa24.25■■□□□ 1.47
HOMER3-201ENST00000221222 DLGAP2Q9P1A6 1054 aa24.25■■□□□ 1.47
HOMER3-201ENST00000221222 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.25■■□□□ 1.47
HOMER3-201ENST00000221222 ZNF487B1APH4 448 aa24.24■■□□□ 1.47
HOMER3-201ENST00000221222 DAPK3O43293 454 aa24.24■■□□□ 1.47
HOMER3-201ENST00000221222 TNNT1P13805 278 aa24.24■■□□□ 1.47
HOMER3-201ENST00000221222 ERCC2P18074 760 aa24.24■■□□□ 1.47
HOMER3-201ENST00000221222 CTNNA2P26232 953 aa24.24■■□□□ 1.47
HOMER3-201ENST00000221222 MZF1P28698 734 aaPredicted RBP24.24■■□□□ 1.47
HOMER3-201ENST00000221222 MAGEA9P43362 315 aa24.24■■□□□ 1.47
HOMER3-201ENST00000221222 PITRM1Q5JRX3 1037 aa24.24■■□□□ 1.47
HOMER3-201ENST00000221222 RNF219Q5W0B1 726 aaPredicted RBP24.24■■□□□ 1.47
HOMER3-201ENST00000221222 PEX26Q7Z412 305 aa24.24■■□□□ 1.47
HOMER3-201ENST00000221222 REXO1L1PQ8IX06 675 aa24.24■■□□□ 1.47
HOMER3-201ENST00000221222 KATNAL2Q8IYT4 538 aa24.24■■□□□ 1.47
HOMER3-201ENST00000221222 UMODL1-AS1Q8N2C9 162 aa24.24■■□□□ 1.47
HOMER3-201ENST00000221222 UBE2Q2Q8WVN8 375 aa24.24■■□□□ 1.47
HOMER3-201ENST00000221222 TTC17Q96AE7 1141 aa24.24■■□□□ 1.47
HOMER3-201ENST00000221222 FAF2Q96CS3 445 aa24.24■■□□□ 1.47
HOMER3-201ENST00000221222 FEM1AQ9BSK4 669 aa24.24■■□□□ 1.47
HOMER3-201ENST00000221222 CALN1Q9BXU9 219 aa24.24■■□□□ 1.47
HOMER3-201ENST00000221222 DNAI1Q9UI46 699 aa24.24■■□□□ 1.47
HOMER3-201ENST00000221222 AMFRQ9UKV5 643 aa24.24■■□□□ 1.47
HOMER3-201ENST00000221222 PYCARDQ9ULZ3 195 aa24.24■■□□□ 1.47
HOMER3-201ENST00000221222 PCDHA3Q9Y5H8 950 aa24.24■■□□□ 1.47
HOMER3-201ENST00000221222 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.24■■□□□ 1.47
HOMER3-201ENST00000221222 ATG2BQ96BY7 2078 aa24.24■■□□□ 1.47
HOMER3-201ENST00000221222 MYO18AQ92614 2054 aaKnown RBP24.23■■□□□ 1.47
HOMER3-201ENST00000221222 MUC22E2RYF6 1773 aaPredicted RBP24.23■■□□□ 1.47
HOMER3-201ENST00000221222 PTPRZ1P23471 2315 aaPredicted RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms