RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 TNFSF9P41273 254 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 SLC25A3Q00325 362 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 HSDL1Q3SXM5 330 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 TMEM270Q6UE05 265 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 ZNF598Q86UK7 904 aaKnown RBP13.93□□□□□ -0.18
GABPB1-201ENST00000220429 SLC51BQ86UW2 128 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 KBTBD6Q86V97 674 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 CATSPER1Q8NEC5 780 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 DHRS9Q9BPW9 319 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 C17orf80Q9BSJ5 609 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 C12orf10Q9HB07 376 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 C12orf4Q9NQ89 552 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 ILVBLA1L0T0 632 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 FAM189A1O60320 539 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 MSCO60682 206 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 SORBS2O94875 1100 aaKnown RBP13.93□□□□□ -0.18
GABPB1-201ENST00000220429 IVDP26440 423 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 ZNF132P52740 706 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 CDKL1Q00532 357 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 BNIP3Q12983 259 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 ZBED5Q49AG3 693 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 HACE1Q8IYU2 909 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 CCDC89Q8N998 374 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 ZNF486Q96H40 463 aaPredicted RBP13.93□□□□□ -0.18
GABPB1-201ENST00000220429 GPR20Q99678 358 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 COQ7Q99807 217 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 CALN1Q9BXU9 219 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 SEZ6LQ9BYH1 1024 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 ALG13Q9NP73 1137 aaKnown RBP13.93□□□□□ -0.18
GABPB1-201ENST00000220429 ARMC1Q9NVT9 282 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.93□□□□□ -0.18
GABPB1-201ENST00000220429 POLIQ9UNA4 740 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 PSMD13Q9UNM6 376 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 PCDHB4Q9Y5E5 795 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 ANK1P16157 1881 aa13.93□□□□□ -0.18
GABPB1-201ENST00000220429 ZBTB42B2RXF5 422 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 GIPC1O14908 333 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 CLDN3O15551 220 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 FKBP9O95302 570 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 CD247P20963 164 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 NSFP46459 744 aaKnown RBP13.92□□□□□ -0.18
GABPB1-201ENST00000220429 P2RX3P56373 397 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 LLGL1Q15334 1064 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 TBCCQ15814 346 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 ZPBP2Q6X784 338 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 MON1BQ7L1V2 547 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 SETD3Q86TU7 594 aaPredicted RBP13.92□□□□□ -0.18
GABPB1-201ENST00000220429 ERO1BQ86YB8 467 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 BRSK2Q8IWQ3 736 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 GRIN3AQ8TCU5 1115 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 SLCO2A1Q92959 643 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 PEX13Q92968 403 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 CFAP57Q96MR6 1250 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 CDC14AQ9UNH5 594 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 SF3B1O75533 1304 aaKnown RBP eCLIP13.92□□□□□ -0.18
GABPB1-201ENST00000220429 PCNTO95613 3336 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 ALX3O95076 343 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 CTRB1P17538 263 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 GNA15P30679 374 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 SSTR3P32745 418 aaPredicted RBP13.92□□□□□ -0.18
GABPB1-201ENST00000220429 ETFBP38117 255 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 PPP2R2BQ00005 443 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 PTK2BQ14289 1009 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 PRKD1Q15139 912 aaPredicted RBP13.92□□□□□ -0.18
GABPB1-201ENST00000220429 CTRB2Q6GPI1 263 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 ZBTB33Q86T24 672 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 IGFN1Q86VF2 1251 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 GALNT13Q8IUC8 556 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.92□□□□□ -0.18
GABPB1-201ENST00000220429 TERB1Q8NA31 727 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 LILRB1Q8NHL6 650 aaPredicted RBP13.92□□□□□ -0.18
GABPB1-201ENST00000220429 ANGPTL6Q8NI99 470 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 TMA16Q96EY4 203 aaKnown RBP13.92□□□□□ -0.18
GABPB1-201ENST00000220429 FAM167AQ96KS9 214 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 LRGUKQ96M69 825 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 CCDC106Q9BWC9 280 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 HOXD1Q9GZZ0 328 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 LRRC19Q9H756 370 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 RPF2Q9H7B2 306 aaKnown RBP13.92□□□□□ -0.18
GABPB1-201ENST00000220429 CAAP1Q9H8G2 361 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 FANCEQ9HB96 536 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 SSU72Q9NP77 194 aaKnown RBP13.92□□□□□ -0.18
GABPB1-201ENST00000220429 RIC8BQ9NVN3 520 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 RBPJLQ9UBG7 517 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 CNTN6Q9UQ52 1028 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 POMPQ9Y244 141 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 A0A1W2PPW3 197 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 CXCL11O14625 94 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 BMP10O95393 424 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 ALOX5P09917 674 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 CCDC159P0C7I6 412 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 NOMO3P69849 1222 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 IER5Q5VY09 327 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 PGM2L1Q6PCE3 622 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 TUBA3EQ6PEY2 450 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 TMC5Q6UXY8 1006 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 RELL1Q8IUW5 271 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 ABRAQ8N0Z2 381 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 LRRC71Q8N4P6 559 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms