RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 BCL10O95999 233 aa13.8□□□□□ -0.2
SF3A1-201ENST00000215793 ACADMP11310 421 aa13.8□□□□□ -0.2
SF3A1-201ENST00000215793 ITGB6P18564 788 aa13.8□□□□□ -0.2
SF3A1-201ENST00000215793 ADRA1DP25100 572 aa13.8□□□□□ -0.2
SF3A1-201ENST00000215793 ADORA2AP29274 412 aa13.8□□□□□ -0.2
SF3A1-201ENST00000215793 NUMBP49757 651 aa13.8□□□□□ -0.2
SF3A1-201ENST00000215793 PSEN2P49810 448 aa13.8□□□□□ -0.2
SF3A1-201ENST00000215793 SHROOM1Q2M3G4 852 aaPredicted RBP13.8□□□□□ -0.2
SF3A1-201ENST00000215793 ARMC12Q5T9G4 340 aa13.8□□□□□ -0.2
SF3A1-201ENST00000215793 TRAPPC12Q8WVT3 735 aa13.8□□□□□ -0.2
SF3A1-201ENST00000215793 DLG3Q92796 817 aa13.8□□□□□ -0.2
SF3A1-201ENST00000215793 ZBTB45Q96K62 511 aaPredicted RBP13.8□□□□□ -0.2
SF3A1-201ENST00000215793 SNX8Q9Y5X2 465 aa13.8□□□□□ -0.2
SF3A1-201ENST00000215793 ACTL7BQ9Y614 415 aa13.8□□□□□ -0.2
SF3A1-201ENST00000215793 ABCA9Q8IUA7 1624 aa13.8□□□□□ -0.2
SF3A1-201ENST00000215793 ZBTB14O43829 449 aa13.8□□□□□ -0.2
SF3A1-201ENST00000215793 CNPP09543 421 aaKnown RBP13.8□□□□□ -0.2
SF3A1-201ENST00000215793 GRK4P32298 578 aa13.8□□□□□ -0.2
SF3A1-201ENST00000215793 SERPINH1P50454 418 aaKnown RBP13.8□□□□□ -0.2
SF3A1-201ENST00000215793 SGCGQ13326 291 aa13.8□□□□□ -0.2
SF3A1-201ENST00000215793 SLC9A5Q14940 896 aa13.8□□□□□ -0.2
SF3A1-201ENST00000215793 PREPLQ4J6C6 727 aaPredicted RBP13.8□□□□□ -0.2
SF3A1-201ENST00000215793 TCHHL1Q5QJ38 904 aaPredicted RBP13.8□□□□□ -0.2
SF3A1-201ENST00000215793 APOBEC3HQ6NTF7 200 aaKnown RBP13.8□□□□□ -0.2
SF3A1-201ENST00000215793 STK32CQ86UX6 486 aa13.8□□□□□ -0.2
SF3A1-201ENST00000215793 ADAM32Q8TC27 787 aa13.8□□□□□ -0.2
SF3A1-201ENST00000215793 NMD3Q96D46 503 aaKnown RBP13.8□□□□□ -0.2
SF3A1-201ENST00000215793 ULBP1Q9BZM6 244 aa13.8□□□□□ -0.2
SF3A1-201ENST00000215793 SMPD4Q9NXE4 827 aa13.8□□□□□ -0.2
SF3A1-201ENST00000215793 CD3EAPO15446 510 aaKnown RBP13.8□□□□□ -0.2
SF3A1-201ENST00000215793 PPIL2Q13356 520 aa13.8□□□□□ -0.2
SF3A1-201ENST00000215793 KCNK18Q7Z418 384 aa13.8□□□□□ -0.2
SF3A1-201ENST00000215793 WDR36Q8NI36 951 aaKnown RBP13.8□□□□□ -0.2
SF3A1-201ENST00000215793 RNF145Q96MT1 663 aa13.8□□□□□ -0.2
SF3A1-201ENST00000215793 CDRT15Q96T59 188 aa13.8□□□□□ -0.2
SF3A1-201ENST00000215793 NFKBIZQ9BYH8 718 aa13.8□□□□□ -0.2
SF3A1-201ENST00000215793 DDX4Q9NQI0 724 aaKnown RBP13.8□□□□□ -0.2
SF3A1-201ENST00000215793 CCDC167Q9P0B6 97 aa13.8□□□□□ -0.2
SF3A1-201ENST00000215793 OPTCQ9UBM4 332 aa13.8□□□□□ -0.2
SF3A1-201ENST00000215793 PPRC1Q5VV67 1664 aaKnown RBP13.8□□□□□ -0.2
SF3A1-201ENST00000215793 A0A0A0MRY4 1105 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 FAM237AA0A1B0GTK4 181 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 ANKRD63C9JTQ0 380 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 FAM20BO75063 409 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 FYNP06241 537 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 FGFR1P11362 822 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 VEGFAP15692 232 aaPredicted RBP13.79□□□□□ -0.2
SF3A1-201ENST00000215793 TSHRP16473 764 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 PIK3R1P27986 724 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 S100A3P33764 101 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 RPL14P50914 215 aaKnown RBP13.79□□□□□ -0.2
SF3A1-201ENST00000215793 ATN1P54259 1190 aaPredicted RBP13.79□□□□□ -0.2
SF3A1-201ENST00000215793 IL2P60568 153 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 INAQ16352 499 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 ILDR1Q86SU0 546 aaPredicted RBP13.79□□□□□ -0.2
SF3A1-201ENST00000215793 PSTKQ8IV42 348 aaKnown RBP13.79□□□□□ -0.2
SF3A1-201ENST00000215793 POU5F2Q8N7G0 328 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 RORBQ92753 470 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 SPATA13Q96N96 652 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 TRAPPC9Q96Q05 1148 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 ATXN3LQ9H3M9 355 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 ETNK2Q9NVF9 386 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 MEGF6O75095 1541 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 ACSM2AQ08AH3 577 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 BTG3Q14201 252 aaPredicted RBP13.79□□□□□ -0.2
SF3A1-201ENST00000215793 PCID2Q5JVF3 399 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 DACT2Q5SW24 774 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 ACSM2BQ68CK6 577 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 CES3Q6UWW8 571 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 DHRSXQ8N5I4 330 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 MKL1Q969V6 931 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 CENPTQ96BT3 561 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 SENP8Q96LD8 212 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 RHBDL2Q9NX52 303 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 MYRFQ9Y2G1 1151 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 LINC00854A0A1B0GVQ3 168 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 TMEM150BA6NC51 233 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 SPTLC1O15269 473 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 RECQL4O94761 1208 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 MED26O95402 600 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 EXOC3L1Q86VI1 746 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 VSIG10LQ86VR7 867 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 ZDHHC13Q8IUH4 622 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 PGLYRP2Q96PD5 576 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 OLFM1Q99784 485 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 PIH1D1Q9NWS0 290 aaKnown RBP13.79□□□□□ -0.2
SF3A1-201ENST00000215793 TNS2Q63HR2 1409 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 CENPXA8MT69 81 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 TSPAN3O60637 253 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 PIGNO95427 931 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 RAG1P15918 1043 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 PAICSP22234 425 aaKnown RBP13.79□□□□□ -0.2
SF3A1-201ENST00000215793 NEK3P51956 506 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 SKP1P63208 163 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 CNTN2Q02246 1040 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 PPP3CAQ08209 521 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 PABPC1LQ4VXU2 614 aaKnown RBP13.79□□□□□ -0.2
SF3A1-201ENST00000215793 ARMC4Q5T2S8 1044 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 GPSM1Q86YR5 675 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 OR8H2Q8N162 312 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms