RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 Ces2aQ8QZR3 558 aa13.66□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Olfr697Q8VFM4 317 aa13.66□□□□□ -0.22
Clcn3-204ENSMUST00000110301 XpotQ9CRT8 963 aa13.66□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Utp11Q9CZJ1 253 aaKnown RBP13.66□□□□□ -0.22
Clcn3-204ENSMUST00000110301 CenpsQ9D084 142 aa13.66□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Olfr703Q9EPF5 319 aa13.66□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Vmn2r104E9Q2J5 860 aa13.66□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Gm20721E9Q2U8 318 aa13.66□□□□□ -0.22
Clcn3-204ENSMUST00000110301 C2cd2E9Q3C1 696 aa13.66□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Cyp27b1O35084 507 aa13.66□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Tgm2P21981 686 aaKnown RBP13.66□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Akt1P31750 480 aa13.66□□□□□ -0.22
Clcn3-204ENSMUST00000110301 DsppP97399 934 aa13.66□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Creb1Q01147 341 aaKnown RBP13.66□□□□□ -0.22
Clcn3-204ENSMUST00000110301 PrlrQ08501 608 aa13.66□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Cd300lfQ6SJQ7 337 aa13.66□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Smad3Q8BUN5 425 aa13.66□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Rbbp5Q8BX09 538 aaKnown RBP13.66□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Kctd2Q8CEZ0 266 aa13.66□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Pcdha5Q91Y15 934 aa13.66□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Anxa13Q99JG3 317 aa13.66□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Tpgs1Q99MS8 303 aa13.66□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Cndp2Q9D1A2 475 aaKnown RBP13.66□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Gpihbp1Q9D1N2 228 aa13.66□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Gprc5dQ9JIL6 344 aa13.66□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Gas2P11862 314 aaKnown RBP13.66□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Epas1P97481 874 aa13.66□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Trim71Q1PSW8 855 aaKnown RBP13.66□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Zbtb33Q8BN78 671 aa13.66□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Nipal4Q8BZF2 406 aa13.66□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Ccdc134Q8C7V8 229 aa13.66□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Fundc1Q9DB70 155 aa13.66□□□□□ -0.22
Clcn3-204ENSMUST00000110301 PrccQ9EQC8 491 aaKnown RBP13.66□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Adamts6D3Z1A5 1117 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Rpl21O09167 160 aaKnown RBP13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Fmo3P97501 534 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Otol1Q4ZJM7 482 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Itih1Q61702 907 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Podnl1Q6P3Y9 559 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Rasa4Q6PFQ7 802 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Olfr1046Q7TR79 316 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Slc20a2Q80UP8 656 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Lrrc27Q80YS5 523 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 4932411N23RikQ8C0S0 470 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 PolbQ8K409 335 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Slc35f5Q8R314 524 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Wnt9aQ8R5M2 365 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Hdac11Q91WA3 347 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Anks3Q9CZK6 655 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Taf7lQ9D3R9 471 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Dnajb4Q9D832 337 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Slc25a19Q9DAM5 318 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Mbtps1Q9WTZ2 1052 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Cep290Q6A078 2472 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Gm4756A0A140LIS8 335 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Krt6aP50446 553 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Zyg11bQ3UFS0 744 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Usp17laQ61068 526 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Soat1Q61263 540 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Nfe2l1Q61985 741 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Ptk6Q64434 451 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Ggnbp1Q6K1E7 370 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Rhbdf2Q80WQ6 827 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Eif2aQ8BJW6 581 aaKnown RBP13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Rnf31Q924T7 1066 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Reep3Q99KK1 254 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Marc1Q9CW42 340 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Ror2Q9Z138 944 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Myh10Q61879 1976 aaKnown RBP13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Pou2f3P31362 431 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Sh3bp2Q06649 559 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Creb3Q61817 404 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Kcnc4Q8R1C0 628 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 MiosQ8VE19 875 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Pcdhgb1Q91XX8 918 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Tbrg4Q91YM4 630 aaKnown RBP13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Gdap2Q9DBL2 498 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Pkp3Q9QY23 797 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Syt5Q9R0N5 386 aa13.65□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Klf6O08584 283 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Gad2P48320 585 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Smpdl3aP70158 445 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Rplp2P99027 115 aaKnown RBP13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Arnt2Q61324 712 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Pde1aQ61481 565 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Phf8Q80TJ7 1023 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Rassf6Q80UQ2 353 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Gtf2a2Q80ZM7 109 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Zbtb41Q811F1 908 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Dlg2Q91XM9 852 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Bace2Q9JL18 514 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Fut2Q9JL27 347 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Copg2Q9QXK3 871 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 9230113P08RikD3YWX3 137 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Serpina3cP29621 417 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Gabpb1Q00420 383 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 ScinQ60604 715 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Hif1aQ61221 836 aaKnown RBP13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 XpaQ64267 272 aa13.64□□□□□ -0.23
Clcn3-204ENSMUST00000110301 Rps6ka6Q7TPS0 764 aa13.64□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 59.2 ms