RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Folh1O35409 752 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Slc6a13P31649 602 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Pyroxd1Q3TMV7 498 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Pik3r5Q5SW28 871 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 LpoQ5SW46 710 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Q6DFW0 481 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Wnk4Q80UE6 1222 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Kctd13Q8BGV7 329 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Heatr3Q8BQM4 679 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Trim68Q8K243 485 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Vmn1r188Q8K3N2 308 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Prb1Q91X93 504 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Ophn1Q99J31 802 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Reep3Q99KK1 254 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Tpd52l2Q9CYZ2 220 aaKnown RBP21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Ubqln5Q9D4I8 510 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Fgf10O35565 209 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Cxcl12P40224 93 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 PolgP54099 1218 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Anp32eP97822 260 aaKnown RBP21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Zyg11bQ3UFS0 744 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Nt5dc3Q3UHB1 546 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Fbxo39Q5NBU5 443 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Ptpn14Q62130 1189 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Krt32Q62168 407 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Zrsr2Q62377 462 aaKnown RBP21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Arhgap30Q640N3 1101 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 PnocQ64387 187 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Il17reQ8BH06 637 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Sept10Q8C650 452 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Nlrp10Q8CCN1 673 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Pdik1lQ8QZR7 341 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Aco2Q99KI0 780 aaKnown RBP21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Pramef12Q9D2F1 463 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Dusp21Q9D9D8 189 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Ccdc103Q9D9P2 237 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 D7h11orf16Q9JJR6 402 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Smok2bQ9QYZ3 484 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Smok2aQ9QYZ6 504 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 NumbQ9QZS3 653 aa21.72■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Ralgps1A2AR50 585 aa21.71■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Nhsl2B1AXH1 854 aa21.71■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Mroh5E9PUJ8 762 aa21.71■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Srsf11E9Q6E5 511 aaKnown RBP21.71■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Zfp94E9Q6Y4 486 aa21.71■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Arfip1G5E8V9 373 aa21.71■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Kif2aP28740 705 aa21.71■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Acot8P58137 320 aa21.71■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Casp4P70343 373 aa21.71■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 TCAIMQ66JZ4 499 aa21.71■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Usp43Q8BUM9 1132 aa21.71■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Slc41a2Q8BYR8 573 aa21.71■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Afap1l1Q8BZI0 768 aa21.71■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Eif3hQ91WK2 352 aaKnown RBP21.71■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Pcdhgb1Q91XX8 918 aa21.71■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 CenpsQ9D084 142 aa21.71■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Cdkn2aipnlQ9D211 116 aaKnown RBP21.71■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 TsaccQ9DA44 124 aa21.71■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Syde1Q9DBZ9 737 aa21.71■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Zfp985A2A7A5 519 aa21.7■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Tnfrsf11bO08712 401 aa21.7■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 FaahO08914 579 aa21.7■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Gas2P11862 314 aaKnown RBP21.7■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Nos2P29477 1144 aa21.7■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Pdss1Q33DR2 409 aa21.7■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Trmt10cQ3UFY8 414 aaKnown RBP21.7■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Tdrd5Q5VCS6 1040 aa21.7■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Cypt4Q6P925 153 aa21.7■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Chsy1Q6ZQ11 800 aa21.7■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Mettl21cQ8BLU2 248 aa21.7■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Fam177a1Q8BR63 207 aa21.7■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Q8C4P0 716 aa21.7■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Zfp263Q8CF60 680 aa21.7■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Tbc1d14Q8CGA2 694 aa21.7■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Slc36a1Q8K4D3 475 aa21.7■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Nol6Q8R5K4 1152 aaKnown RBP21.7■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Evi2bQ8VD58 444 aa21.7■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Armc9Q9D2I5 817 aa21.7■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Polr3cQ9D483 533 aa21.7■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 EtfbQ9DCW4 255 aaKnown RBP21.7■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Prmt1Q9JIF0 371 aa21.7■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Atp11cQ9QZW0 1129 aa21.7■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Bclaf3A2AG58 752 aaKnown RBP21.69■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Fam171a1A2ATK9 892 aa21.69■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Aldoart1A6ZI46 419 aa21.69■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Cd160O88875 185 aa21.69■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Gpr3P35413 330 aa21.69■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Gabpb1Q00420 383 aa21.69■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Eif2b4Q61749 524 aa21.69■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Nlrp4fQ66X05 959 aa21.69■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Ip6k2Q80V72 448 aa21.69■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Haus3Q8QZX2 570 aa21.69■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Smim14Q91VT8 99 aa21.69■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Szt2A2A9C3 3431 aa21.69■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Vsig10l2A0A140LHF2 776 aa21.69■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Zfp651E9PZ11 729 aa21.69■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Banf1O54962 89 aa21.69■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 AdprhP54923 362 aa21.69■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Uba1Q02053 1058 aaKnown RBP21.69■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Cyp2c65Q148B1 490 aa21.69■■□□□ 1.06
Retrieved 100 of 22,080 RNA–protein pairs in 21.5 ms