RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Ftsj1Q8CBC7 324 aa15.02■□□□□ -0
Pcdh20-201ENSMUST00000061628 Olfr589Q8VGV8 317 aa15.02■□□□□ -0
Pcdh20-201ENSMUST00000061628 Gprc5bQ923Z0 410 aa15.02■□□□□ -0
Pcdh20-201ENSMUST00000061628 Fam205a1D3YZF6 1314 aa15.02■□□□□ -0
Pcdh20-201ENSMUST00000061628 Ms4a14A0A087WSD2 1232 aa15.02□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Lgr4A2ARI4 951 aa15.02□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Hnrnph3D3Z3N4 346 aaKnown RBP15.02□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Slc16a10Q3U9N9 512 aa15.02□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Dnajc1Q61712 552 aaKnown RBP15.02□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Il33Q8BVZ5 266 aa15.02□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Mcrs1Q99L90 462 aa15.02□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 PllpQ9DCU2 182 aa15.02□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Cyb561d2Q9WUE3 222 aa15.02□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 H2afb2S4R1M3 115 aa15.02□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Nipsnap3aB1AWZ3 247 aa15.02□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 EXOC1LB9EK06 172 aa15.02□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Slfn4Q3UV66 602 aa15.02□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Oog3Q3UWY1 500 aa15.02□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Rnf145Q5SWK7 663 aa15.02□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 PhgdhQ61753 533 aaKnown RBP15.02□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Ubxn7Q6P5G6 467 aa15.02□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 GmppbQ8BTZ7 360 aa15.02□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 CenpnQ9CZW2 337 aa15.02□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Uts2Q9QZQ3 123 aa15.02□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Myo5cE9Q1F5 1742 aa15.02□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Slc1a6O35544 561 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Bnc1O35914 961 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 LtfP08071 707 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Itga11P61622 1188 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Ceacam5Q3UKK2 947 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Zswim6Q80TB7 1207 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Pcdh19Q80TF3 1145 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Fbxl21Q8BFZ4 434 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Sfr1Q8BP27 319 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Fig4Q91WF7 907 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Pcdhb19Q91Y01 801 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Gpn3Q9D3W4 284 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Kcnu1O54982 1121 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Serpina3cP29621 417 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Rfx2P48379 717 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Hpcal1P62748 193 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Polr2lP62876 67 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Ankrd27Q3UMR0 1048 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Gstt1Q64471 240 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Ggnbp1Q6K1E7 370 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Anapc2Q8BZQ7 837 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Sfrp1Q8C4U3 314 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Vmn1r64Q8R2B8 320 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Rad21l1A2AU37 552 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Galnt4O08832 578 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 CkmP07310 381 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Pou1f1Q00286 291 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Ppm1jQ149T7 507 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Smyd5Q3TYX3 416 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Shroom1Q5SX79 823 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 TsnQ62348 228 aaKnown RBP15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Cdkn2aipQ8BI72 563 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Igdcc3Q8BQC3 813 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 TbcdQ8BYA0 1196 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Ppp1r11Q8K1L5 131 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Mapk8Q91Y86 384 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 B3galt6Q91Z92 325 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Slc39a3Q99K24 317 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Chst7Q9EP78 484 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Kifc1Q9QWT9 674 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Fam71dD3YV92 440 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Cyp2t4E9PWV0 503 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Gm44G3UW88 330 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 FynP39688 537 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Glt6d1Q2NKH9 311 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Ndst1Q3UHN9 882 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Elmo3Q8BYZ7 720 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Castor2Q8CAB8 329 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Sh3glb2Q8R3V5 400 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Cd300ldQ8VCH2 221 aa15.01□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Klhl18A0A0G2JGN5 579 aa15□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 S100zB9EJL3 99 aa15□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Gm8257E9Q8R3 264 aa15□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Itgb5O70309 798 aa15□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Lire1P11260 357 aa15□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Ugt1a2P70691 533 aa15□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Ugt1a1Q63886 535 aa15□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 DgkqQ6P5E8 934 aa15□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Chst10Q6PGK7 356 aa15□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Camk1dQ8BW96 385 aa15□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Celf3Q8CIN6 465 aa15□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Q9D4A5 307 aa15□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Clcn5Q9WVD4 746 aa15□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Znf804aA2AKY4 1200 aa15□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Gm4450E9Q007 373 aa15□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Ikzf3O08900 507 aa15□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Phka1P18826 1241 aa15□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Mov10P23249 1004 aaKnown RBP15□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 MipP51180 263 aa15□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Ccng1P51945 294 aa15□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Hsd3b4Q61767 373 aa15□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Best3Q6H1V1 669 aa15□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Ubash3bQ8BGG7 638 aa15□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Pcdhga4Q91XY4 930 aa15□□□□□ -0.01
Pcdh20-201ENSMUST00000061628 Tex44Q9DA60 530 aa15□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms