RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Ccnd3P30282 292 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Ikzf1Q03267 517 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Paqr6Q6TCG5 343 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Olfr792Q7TRH9 311 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Fra10ac1Q8BP78 315 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Cops7bQ8BV13 264 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 ClmnQ8C5W0 1052 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Adam32Q8K410 754 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Creld1Q91XD7 420 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Serbp1Q9CY58 407 aaKnown RBP10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Lrrc71Q9D3W5 558 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Atg7Q9D906 698 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Rnf138rt1Q9D9M9 248 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Rsph3bQ9DA80 389 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Mettl7bQ9DD20 244 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Twf2Q9Z0P5 349 aaKnown RBP10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Slc23a1Q9Z2J0 605 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Arid2E9Q7E2 1828 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Kif6E9PX57 802 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Ifi206G3UZV2 921 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Gm3264L7N2C5 238 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Tsta3P23591 321 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Tgfb2P27090 414 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Kcnj6P48542 425 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 PgrQ00175 926 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Tmem26Q3UP23 366 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 9930111J21Rik1Q5SVP0 844 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Mtmr10Q7TPM9 771 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Fnip2Q80TD3 1108 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Ankrd45Q810N6 248 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Ankrd52Q8BTI7 1076 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Trim14Q8BVW3 440 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Arhgap25Q8BYW1 648 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Wdr59Q8C0M0 992 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Trim32Q8CH72 655 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Tmprss4Q8VCA5 435 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Tcaf2Q921K8 919 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Unc45aQ99KD5 944 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Katnal2Q9D3R6 539 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 1700080O16RikQ9D9G4 284 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Eif4e3Q9DBB5 207 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Spock2Q9ER58 423 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Ngly1Q9JI78 651 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Map3k14Q9WUL6 942 aa10□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 A0A1Y7VP24 259 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 NuggcD3YWJ0 796 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Galntl6E5D8G1 601 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Ckmt1P30275 418 aaKnown RBP9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Atp6v0d1P51863 351 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Atp5bP56480 529 aaKnown RBP9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 MyrfQ3UR85 1138 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Slc5a10Q5SWY8 596 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Ptpn14Q62130 1189 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Nomo1Q6GQT9 1214 aaKnown RBP9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Sema3dQ8BH34 777 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Zfp398Q8BV16 643 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Lsm12Q9D0R8 195 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Abcb9Q9JJ59 762 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Dcun1d1Q9QZ73 259 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Zbtb11G5E8B9 1050 aaKnown RBP9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 IppP28575 584 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Olfm3P63056 478 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Il6stQ00560 917 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Ripply1Q2WG77 201 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Arhgap1Q5FWK3 439 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 ScinQ60604 715 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 EfsQ64355 560 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Fndc3bQ6NWW9 1207 aaKnown RBP9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Rxfp1Q6R6I7 758 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Pdk1Q8BFP9 434 aaKnown RBP9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 VcpkmtQ8C436 228 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 NeproQ8R2U2 564 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Fam114a2Q8VE88 497 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Mrpl57Q9CQF8 102 aaKnown RBP9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Map3k6Q9WTR2 1291 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Spin2dB1B0R2 236 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 E230025N22RikG5E8S3 482 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Vmn2r44L7N2E1 861 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 NoctO35710 429 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Ptpn20O55082 426 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Hcn4O70507 1186 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Il2P04351 169 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Casp2P29594 452 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Il12aP43431 215 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Agap2Q3UHD9 1186 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Cln3Q61124 438 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Nlrp9cQ66X01 1004 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Arl5cQ6P068 179 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Chst10Q6PGK7 356 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Kirrel2Q7TSU7 700 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Slc36a3Q811P0 477 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Cwf19l2Q8BG79 887 aaKnown RBP9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Znf385bQ8BXJ8 482 aaKnown RBP9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Slco6c1Q8C0X7 706 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Sulf1Q8K007 870 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Rps6kl1Q8R2S1 544 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Cys1Q8R4T1 145 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Ssx2ipQ8VC66 615 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 HnmtQ91VF2 295 aa9.99□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Fam136aQ9CR98 138 aa9.99□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 22.7 ms