RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Zbtb14Q08376 449 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Slc17a7Q3TXX4 560 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Lipo3Q3UT41 399 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Kansl1lQ5DTI6 991 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Actr5Q80US4 605 aaKnown RBP11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Mapk15Q80Y86 549 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Tmtc4Q8BG19 741 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Qsox1Q8BND5 748 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Washc5Q8C2E7 1159 aaKnown RBP11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Rftn2Q8CHX7 500 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Pofut2Q8VHI3 429 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Il21rQ9JHX3 529 aa11.1□□□□□ -0.63
Msh3-201ENSMUST00000022220 Olfr1305A2AVW3 312 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Gm4871D3Z0W7 314 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Tlx1P43345 332 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Adamts19P59509 1210 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Q3KNL4 93 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Kpna1Q60960 538 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 SnrpaQ62189 287 aaKnown RBP11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 CochQ62507 552 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 RetsatQ64FW2 609 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Cand2Q6ZQ73 1235 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Nemp1Q6ZQE4 437 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Creb3l2Q8BH52 521 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Il33Q8BVZ5 266 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Lmo3Q8BZL8 145 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Fam78aQ8C552 283 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Vps39Q8R5L3 886 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Olfr1353Q8VGU8 309 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Pcdha3Q91Y16 942 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Chit1Q9D7Q1 464 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Gsdmdc1Q9D8T2 487 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Efhc1Q9D9T8 648 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Slc15a2Q9ES07 729 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Kiaa0100Q5SYL3 2234 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Vmn2r19G5E8G4 854 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Dpysl4O35098 572 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Ap3d1O54774 1199 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Dnmt3aO88508 908 aaKnown RBP11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Hcn2O88703 863 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Tap2P36371 702 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 CkbQ04447 381 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Trcg1Q58Y74 825 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Grid1Q61627 1009 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Map3k10Q66L42 940 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Vmn2r26Q6TAC4 855 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Ppme1Q8BVQ5 386 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 SowahcQ8C0J6 512 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Sec16bQ91XT4 1051 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Necab2Q91ZP9 389 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Gimap3Q99MI6 301 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Actl7bQ9QY83 418 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Cfap44E9Q5M6 1843 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Fpr-rs4A4FUQ5 323 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Phf11A6H5X4 337 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Siah3B2RWG3 268 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 ZfrO88532 1074 aaKnown RBP11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Ptpn1P35821 432 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Man1a1P45700 655 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 1810049J17RikQ3V2G9 153 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Traf3Q60803 567 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Fam120bQ6RI63 786 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Glra2Q7TNC8 452 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Mfn1Q811U4 741 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Rbm22Q8BHS3 420 aaKnown RBP11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Ints6lQ8BND4 861 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Hdac7Q8C2B3 938 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Haus3Q8QZX2 570 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 ItpkaQ8R071 459 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Nol6Q8R5K4 1152 aaKnown RBP11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 HnrnprQ8VHM5 632 aaKnown RBP11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Atad1Q9D5T0 361 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Msh5Q9QUM7 833 aa11.09□□□□□ -0.63
Msh3-201ENSMUST00000022220 Bclaf3A2AG58 752 aaKnown RBP11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Ces1bD3Z5G7 567 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Cyp2t4E9PWV0 503 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 MttpO08601 894 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Prl3b1P09586 222 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 PrkchP23298 683 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 ZfaP23607 742 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Glb1P23780 647 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Pex2P55098 305 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Tff2Q03404 129 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Znf112Q0VAW7 879 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Mrgprb1Q3UG61 350 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Cpa4Q6P8K8 420 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Tas2r102Q7M717 329 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Fbxw8Q8BIA4 598 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 BfarQ8R079 450 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Slc25a3Q8VEM8 357 aaKnown RBP11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Pip4k2cQ91XU3 421 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Rwdd4Q9CPR1 188 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Pin4Q9CWW6 131 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 DtnaQ9D2N4 746 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Alg13Q9D8C3 1166 aaKnown RBP11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Rdh14Q9ERI6 334 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 GraspQ9JJA9 392 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Slc26a3Q9WVC8 757 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Gm5485A0A1D5RM98 91 aa11.08□□□□□ -0.64
Msh3-201ENSMUST00000022220 Aldoart1A6ZI46 419 aa11.08□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 11.6 ms