RNA–Protein interactions for RNA: ENST00000641991.1

CASC19-272, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,360 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-272ENST00000641991 PMFBP1Q8TBY8 1022 aa15.49■□□□□ 0.07
CASC19-272ENST00000641991 C19orf44Q9H6X5 657 aa15.49■□□□□ 0.07
CASC19-272ENST00000641991 OVOS2A0A0J9YW53 1432 aa15.49■□□□□ 0.07
CASC19-272ENST00000641991 OVOS2Q6IE36 1432 aa15.49■□□□□ 0.07
CASC19-272ENST00000641991 RGPD8O14715 1765 aaPredicted RBP15.49■□□□□ 0.07
CASC19-272ENST00000641991 MTHFSP49914 203 aa15.49■□□□□ 0.07
CASC19-272ENST00000641991 NGDNQ8NEJ9 315 aaKnown RBP15.49■□□□□ 0.07
CASC19-272ENST00000641991 PHF8Q9UPP1 1060 aa15.49■□□□□ 0.07
CASC19-272ENST00000641991 TTC21AQ8NDW8 1320 aa15.48■□□□□ 0.07
CASC19-272ENST00000641991 ZRANB1Q9UGI0 708 aa15.48■□□□□ 0.07
CASC19-272ENST00000641991 LRRC7Q96NW7 1537 aa15.47■□□□□ 0.07
CASC19-272ENST00000641991 SMG6Q86US8 1419 aaKnown RBP15.47■□□□□ 0.07
CASC19-272ENST00000641991 ZBED9Q6R2W3 1325 aa15.47■□□□□ 0.07
CASC19-272ENST00000641991 ZNF335Q9H4Z2 1342 aaPredicted RBP15.47■□□□□ 0.07
CASC19-272ENST00000641991 COL3A1P02461 1466 aaPredicted RBP15.47■□□□□ 0.07
CASC19-272ENST00000641991 C1orf167Q5SNV9 1468 aa15.47■□□□□ 0.07
CASC19-272ENST00000641991 MST1RQ04912 1400 aa15.47■□□□□ 0.07
CASC19-272ENST00000641991 AATKQ6ZMQ8 1374 aa15.46■□□□□ 0.07
CASC19-272ENST00000641991 SHPRHQ149N8 1683 aa15.46■□□□□ 0.07
CASC19-272ENST00000641991 USP31Q70CQ4 1352 aa15.45■□□□□ 0.06
CASC19-272ENST00000641991 WDR43Q15061 677 aaKnown RBP eCLIP15.45■□□□□ 0.06
CASC19-272ENST00000641991 COG3Q96JB2 828 aa15.45■□□□□ 0.06
CASC19-272ENST00000641991 ADAMTS8Q9UP79 889 aa15.45■□□□□ 0.06
CASC19-272ENST00000641991 PNPLA6Q8IY17 1366 aa15.44■□□□□ 0.06
CASC19-272ENST00000641991 CFAP53Q96M91 514 aa15.44■□□□□ 0.06
CASC19-272ENST00000641991 DMRT2Q9Y5R5 561 aa15.44■□□□□ 0.06
CASC19-272ENST00000641991 PIK3C2AO00443 1686 aa15.44■□□□□ 0.06
CASC19-272ENST00000641991 ESCO1Q5FWF5 840 aa15.43■□□□□ 0.06
CASC19-272ENST00000641991 MSH6P52701 1360 aa15.43■□□□□ 0.06
CASC19-272ENST00000641991 KIF1AQ12756 1690 aa15.42■□□□□ 0.06
CASC19-272ENST00000641991 USP54Q70EL1 1684 aa15.42■□□□□ 0.06
CASC19-272ENST00000641991 CDK12Q9NYV4 1490 aaPredicted RBP15.42■□□□□ 0.06
CASC19-272ENST00000641991 ATF3P18847 181 aa15.42■□□□□ 0.06
CASC19-272ENST00000641991 ORAI2Q96SN7 254 aa15.42■□□□□ 0.06
CASC19-272ENST00000641991 POLKQ9UBT6 870 aa15.42■□□□□ 0.06
CASC19-272ENST00000641991 XIRP1Q702N8 1843 aaKnown RBP15.42■□□□□ 0.06
CASC19-272ENST00000641991 CADPS2Q86UW7 1296 aa15.4■□□□□ 0.06
CASC19-272ENST00000641991 FBLN1P23142 703 aa15.39■□□□□ 0.05
CASC19-272ENST00000641991 EMILIN1Q9Y6C2 1016 aa15.38■□□□□ 0.05
CASC19-272ENST00000641991 MARF1Q9Y4F3 1742 aaKnown RBP15.38■□□□□ 0.05
CASC19-272ENST00000641991 TRPM3Q9HCF6 1732 aaPredicted RBP15.37■□□□□ 0.05
CASC19-272ENST00000641991 IQSEC2Q5JU85 1478 aa15.36■□□□□ 0.05
CASC19-272ENST00000641991 FOXO3O43524 673 aa15.36■□□□□ 0.05
CASC19-272ENST00000641991 PSME1Q06323 249 aa15.36■□□□□ 0.05
CASC19-272ENST00000641991 DIAPH1O60610 1272 aaKnown RBP15.35■□□□□ 0.05
CASC19-272ENST00000641991 RRS1Q15050 365 aaKnown RBP15.35■□□□□ 0.05
CASC19-272ENST00000641991 PEAK1Q9H792 1746 aa15.34■□□□□ 0.05
CASC19-272ENST00000641991 SENP3-EIF4A1A0A087X0R7 540 aa15.34■□□□□ 0.05
CASC19-272ENST00000641991 PAK3O75914 559 aaPredicted RBP15.34■□□□□ 0.05
CASC19-272ENST00000641991 NLRP6P59044 892 aa15.34■□□□□ 0.05
CASC19-272ENST00000641991 CCDC146Q8IYE0 955 aa15.34■□□□□ 0.05
CASC19-272ENST00000641991 ABTB2Q8N961 1025 aa15.34■□□□□ 0.05
CASC19-272ENST00000641991 NUDCQ9Y266 331 aa15.34■□□□□ 0.05
CASC19-272ENST00000641991 PPM1GO15355 546 aaPredicted RBP15.33■□□□□ 0.04
CASC19-272ENST00000641991 NFAT5O94916 1531 aa15.33■□□□□ 0.04
CASC19-272ENST00000641991 LTBP4Q8N2S1 1624 aa15.32■□□□□ 0.04
CASC19-272ENST00000641991 MAP3K19Q56UN5 1328 aa15.32■□□□□ 0.04
CASC19-272ENST00000641991 U2AF1L5P0DN76 240 aaPredicted RBP15.32■□□□□ 0.04
CASC19-272ENST00000641991 U2AF1Q01081 240 aaKnown RBP eCLIP15.32■□□□□ 0.041e-15■■■□□ 14.9
CASC19-272ENST00000641991 XPCQ01831 940 aaPredicted RBP15.32■□□□□ 0.04
CASC19-272ENST00000641991 NUTM2GQ5VZR2 741 aa15.32■□□□□ 0.04
CASC19-272ENST00000641991 KRT28Q7Z3Y7 464 aa15.32■□□□□ 0.04
CASC19-272ENST00000641991 PXDNQ92626 1479 aa15.32■□□□□ 0.04
CASC19-272ENST00000641991 SBNO1A3KN83 1393 aa15.31■□□□□ 0.04
CASC19-272ENST00000641991 SLIT3O75094 1523 aa15.31■□□□□ 0.04
CASC19-272ENST00000641991 IL13P35225 146 aa15.31■□□□□ 0.04
CASC19-272ENST00000641991 USP19O94966 1318 aa15.3■□□□□ 0.04
CASC19-272ENST00000641991 NPHP3Q7Z494 1330 aa15.3■□□□□ 0.04
CASC19-272ENST00000641991 ZNF521Q96K83 1311 aa15.3■□□□□ 0.04
CASC19-272ENST00000641991 APAF1O14727 1248 aa15.3■□□□□ 0.04
CASC19-272ENST00000641991 BRINP3Q76B58 766 aa15.3■□□□□ 0.04
CASC19-272ENST00000641991 RUNDC1Q96C34 613 aa15.3■□□□□ 0.04
CASC19-272ENST00000641991 FLT4P35916 1363 aa15.3■□□□□ 0.04
CASC19-272ENST00000641991 KIF24Q5T7B8 1368 aa15.3■□□□□ 0.04
CASC19-272ENST00000641991 ALS2Q96Q42 1657 aa15.3■□□□□ 0.04
CASC19-272ENST00000641991 MAP2P11137 1827 aaKnown RBP15.3■□□□□ 0.04
CASC19-272ENST00000641991 U2SURPO15042 1029 aaKnown RBP15.29■□□□□ 0.04
CASC19-272ENST00000641991 SOX12O15370 315 aa15.29■□□□□ 0.04
CASC19-272ENST00000641991 NGEFQ8N5V2 710 aa15.29■□□□□ 0.04
CASC19-272ENST00000641991 SLAIN2Q9P270 581 aa15.29■□□□□ 0.04
CASC19-272ENST00000641991 PDE3BQ13370 1112 aa15.28■□□□□ 0.04
CASC19-272ENST00000641991 PLEKHF1Q96S99 279 aa15.28■□□□□ 0.04
CASC19-272ENST00000641991 RTL1A6NKG5 1358 aa15.28■□□□□ 0.04
CASC19-272ENST00000641991 TNS3Q68CZ2 1445 aa15.27■□□□□ 0.04
CASC19-272ENST00000641991 DDX17Q92841 729 aaKnown RBP15.27■□□□□ 0.04
CASC19-272ENST00000641991 SALL2Q9Y467 1007 aaPredicted RBP15.27■□□□□ 0.04
CASC19-272ENST00000641991 EIF4A2Q14240 407 aaKnown RBP15.26■□□□□ 0.03
CASC19-272ENST00000641991 HSP90AB2PQ58FF8 381 aa15.26■□□□□ 0.03
CASC19-272ENST00000641991 RSPH6AQ9H0K4 717 aa15.26■□□□□ 0.03
CASC19-272ENST00000641991 FCHSD2O94868 740 aa15.25■□□□□ 0.03
CASC19-272ENST00000641991 NCBP3Q53F19 620 aaKnown RBP15.25■□□□□ 0.03
CASC19-272ENST00000641991 TCP11L2Q8N4U5 519 aa15.25■□□□□ 0.03
CASC19-272ENST00000641991 PHF23Q9BUL5 403 aaPredicted RBP15.25■□□□□ 0.03
CASC19-272ENST00000641991 RGPD1P0DJD0 1748 aa15.25■□□□□ 0.03
CASC19-272ENST00000641991 PHRF1Q9P1Y6 1649 aaKnown RBP15.25■□□□□ 0.03
CASC19-272ENST00000641991 MED1Q15648 1581 aaPredicted RBP15.25■□□□□ 0.03
CASC19-272ENST00000641991 KCNH5Q8NCM2 988 aa15.24■□□□□ 0.03
CASC19-272ENST00000641991 HOXC9P31274 260 aa15.24■□□□□ 0.03
CASC19-272ENST00000641991 AMPHP49418 695 aa15.24■□□□□ 0.03
CASC19-272ENST00000641991 SOS2Q07890 1332 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms