RNA–Protein interactions for RNA: ENST00000641964.1

CASC19-269, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,415 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-269ENST00000641964 ZNF330Q9Y3S2 320 aaPredicted RBP8.9□□□□□ -0.98
CASC19-269ENST00000641964 UNC13AQ9UPW8 1703 aa8.89□□□□□ -0.99
CASC19-269ENST00000641964 SCRIBQ14160 1630 aa8.89□□□□□ -0.99
CASC19-269ENST00000641964 ACIN1Q9UKV3 1341 aaKnown RBP8.89□□□□□ -0.99
CASC19-269ENST00000641964 PATL2C9JE40 543 aaKnown RBP8.89□□□□□ -0.99
CASC19-269ENST00000641964 SNIP1Q8TAD8 396 aaKnown RBP8.89□□□□□ -0.99
CASC19-269ENST00000641964 COG6Q9Y2V7 657 aa8.89□□□□□ -0.99
CASC19-269ENST00000641964 WNT7AO00755 349 aa8.88□□□□□ -0.99
CASC19-269ENST00000641964 CD46P15529 392 aa8.88□□□□□ -0.99
CASC19-269ENST00000641964 TRIM32Q13049 653 aa8.88□□□□□ -0.99
CASC19-269ENST00000641964 IRF5Q13568 498 aa8.88□□□□□ -0.99
CASC19-269ENST00000641964 KDM4AO75164 1064 aa8.88□□□□□ -0.99
CASC19-269ENST00000641964 RBM25P49756 843 aaKnown RBP8.88□□□□□ -0.99
CASC19-269ENST00000641964 SMCPP49901 116 aaPredicted RBP8.88□□□□□ -0.99
CASC19-269ENST00000641964 CCDC24Q8N4L8 307 aa8.88□□□□□ -0.99
CASC19-269ENST00000641964 USB1Q9BQ65 265 aaKnown RBP8.88□□□□□ -0.99
CASC19-269ENST00000641964 GPCPD1Q9NPB8 672 aa8.88□□□□□ -0.99
CASC19-269ENST00000641964 SMPD1P17405 629 aa8.87□□□□□ -0.99
CASC19-269ENST00000641964 MMP16P51512 607 aa8.87□□□□□ -0.99
CASC19-269ENST00000641964 LCE2AQ5TA79 106 aaPredicted RBP8.87□□□□□ -0.99
CASC19-269ENST00000641964 MRGPRX2Q96LB1 330 aa8.87□□□□□ -0.99
CASC19-269ENST00000641964 MDM2Q00987 491 aaPredicted RBP8.86□□□□□ -0.99
CASC19-269ENST00000641964 FOXD4L5Q5VV16 416 aaPredicted RBP8.86□□□□□ -0.99
CASC19-269ENST00000641964 PROCA1Q8NCQ7 364 aaPredicted RBP8.86□□□□□ -0.99
CASC19-269ENST00000641964 BANK1Q8NDB2 785 aa8.86□□□□□ -0.99
CASC19-269ENST00000641964 FOXD4L4Q8WXT5 416 aaPredicted RBP8.86□□□□□ -0.99
CASC19-269ENST00000641964 SHROOM4Q9ULL8 1493 aa8.86□□□□□ -0.99
CASC19-269ENST00000641964 LOC105371045A0A1W2PR82 267 aa8.85□□□□□ -0.99
CASC19-269ENST00000641964 J3QL48 77 aa8.85□□□□□ -0.99
CASC19-269ENST00000641964 WFS1O76024 890 aa8.85□□□□□ -0.99
CASC19-269ENST00000641964 SSTR3P32745 418 aaPredicted RBP8.85□□□□□ -0.99
CASC19-269ENST00000641964 WWC1Q8IX03 1113 aa8.85□□□□□ -0.99
CASC19-269ENST00000641964 HLA-CQ95604 372 aa8.85□□□□□ -0.99
CASC19-269ENST00000641964 POLR3EQ9NVU0 708 aa8.84□□□□□ -0.99
CASC19-269ENST00000641964 DXOO77932 396 aaKnown RBP8.83□□□□□ -1
CASC19-269ENST00000641964 BEGAINQ9BUH8 593 aa8.83□□□□□ -1
CASC19-269ENST00000641964 ATP13A2Q9NQ11 1180 aa8.82□□□□□ -1
CASC19-269ENST00000641964 E9PSI1 815 aa8.81□□□□□ -1
CASC19-269ENST00000641964 USP46P62068 366 aa8.81□□□□□ -1
CASC19-269ENST00000641964 RC3H1Q5TC82 1133 aaKnown RBP8.81□□□□□ -1
CASC19-269ENST00000641964 HPS1Q92902 700 aa8.81□□□□□ -1
CASC19-269ENST00000641964 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.81□□□□□ -1
CASC19-269ENST00000641964 CECR2Q9BXF3 1484 aa8.81□□□□□ -1
CASC19-269ENST00000641964 SNRPBP14678 240 aaKnown RBP8.8□□□□□ -1
CASC19-269ENST00000641964 CALR3Q96L12 384 aaKnown RBP8.8□□□□□ -1
CASC19-269ENST00000641964 HOXA2O43364 376 aa8.8□□□□□ -1
CASC19-269ENST00000641964 IGSF3O75054 1194 aa8.8□□□□□ -1
CASC19-269ENST00000641964 GUCA2AQ02747 115 aa8.8□□□□□ -1
CASC19-269ENST00000641964 SYMPKQ92797 1274 aaKnown RBP8.8□□□□□ -1
CASC19-269ENST00000641964 SNRKQ9NRH2 765 aa8.8□□□□□ -1
CASC19-269ENST00000641964 RFC5P40937 340 aa8.79□□□□□ -1
CASC19-269ENST00000641964 SKOR1P84550 965 aa8.79□□□□□ -1
CASC19-269ENST00000641964 KCNA1Q09470 495 aa8.79□□□□□ -1
CASC19-269ENST00000641964 NFX1Q12986 1120 aaKnown RBP8.79□□□□□ -1
CASC19-269ENST00000641964 TMEM259Q4ZIN3 620 aa8.79□□□□□ -1
CASC19-269ENST00000641964 ZNF428Q96B54 188 aa8.79□□□□□ -1
CASC19-269ENST00000641964 BICRAQ9NZM4 1560 aa8.78□□□□□ -1
CASC19-269ENST00000641964 CLK2P49760 499 aaKnown RBP8.78□□□□□ -1
CASC19-269ENST00000641964 MYSM1Q5VVJ2 828 aa8.78□□□□□ -1
CASC19-269ENST00000641964 SENP2Q9HC62 589 aa8.78□□□□□ -1
CASC19-269ENST00000641964 NUTM1Q86Y26 1132 aa8.77□□□□□ -1.01
CASC19-269ENST00000641964 PRM3Q9NNZ6 103 aa8.77□□□□□ -1.01
CASC19-269ENST00000641964 FAM217BQ9NTX9 383 aaPredicted RBP8.77□□□□□ -1.01
CASC19-269ENST00000641964 BRD1O95696 1058 aa8.76□□□□□ -1.01
CASC19-269ENST00000641964 ALDH1A1P00352 501 aa8.76□□□□□ -1.01
CASC19-269ENST00000641964 WNT7BP56706 349 aa8.76□□□□□ -1.01
CASC19-269ENST00000641964 TRIM47Q96LD4 638 aa8.76□□□□□ -1.01
CASC19-269ENST00000641964 JUNDP17535 347 aa8.75□□□□□ -1.01
CASC19-269ENST00000641964 DIXDC1Q155Q3 683 aa8.75□□□□□ -1.01
CASC19-269ENST00000641964 TERTO14746 1132 aaKnown RBP8.74□□□□□ -1.01
CASC19-269ENST00000641964 GDPD2Q9HCC8 539 aa8.74□□□□□ -1.01
CASC19-269ENST00000641964 PTCRAQ6ISU1 281 aaPredicted RBP8.73□□□□□ -1.01
CASC19-269ENST00000641964 GLMNQ92990 594 aa8.73□□□□□ -1.01
CASC19-269ENST00000641964 USTQ9Y2C2 406 aa8.73□□□□□ -1.01
CASC19-269ENST00000641964 EHBP1Q8NDI1 1231 aa8.72□□□□□ -1.01
CASC19-269ENST00000641964 KIFC2Q96AC6 838 aa8.72□□□□□ -1.01
CASC19-269ENST00000641964 NUDT12Q9BQG2 462 aa8.72□□□□□ -1.01
CASC19-269ENST00000641964 AMOTL2Q9Y2J4 779 aa8.72□□□□□ -1.01
CASC19-269ENST00000641964 CSB-PGBD3P0DP91 1061 aa8.71□□□□□ -1.01
CASC19-269ENST00000641964 ABL2P42684 1182 aa8.71□□□□□ -1.01
CASC19-269ENST00000641964 INSM1Q01101 510 aaPredicted RBP8.71□□□□□ -1.01
CASC19-269ENST00000641964 RETREG3Q86VR2 466 aa8.71□□□□□ -1.01
CASC19-269ENST00000641964 PBXIP1Q96AQ6 731 aa8.71□□□□□ -1.01
CASC19-269ENST00000641964 C6orf229H3BNL8 230 aa8.71□□□□□ -1.02
CASC19-269ENST00000641964 WIPF1O43516 503 aa8.71□□□□□ -1.02
CASC19-269ENST00000641964 PPP2R2DQ66LE6 453 aa8.71□□□□□ -1.02
CASC19-269ENST00000641964 MTMR14Q8NCE2 650 aa8.71□□□□□ -1.02
CASC19-269ENST00000641964 CC2D2AQ9P2K1 1620 aa8.71□□□□□ -1.02
CASC19-269ENST00000641964 SOCS7O14512 581 aa8.7□□□□□ -1.02
CASC19-269ENST00000641964 FDX1P10109 184 aa8.7□□□□□ -1.02
CASC19-269ENST00000641964 TBC1D2Q9BYX2 928 aa8.7□□□□□ -1.02
CASC19-269ENST00000641964 STK17AQ9UEE5 414 aa8.7□□□□□ -1.02
CASC19-269ENST00000641964 WASF2Q9Y6W5 498 aa8.7□□□□□ -1.02
CASC19-269ENST00000641964 SIAH2O43255 324 aa8.69□□□□□ -1.02
CASC19-269ENST00000641964 LCE2CQ5TA81 110 aa8.69□□□□□ -1.02
CASC19-269ENST00000641964 PCDHGC3Q9UN70 934 aa8.69□□□□□ -1.02
CASC19-269ENST00000641964 POM121CA8CG34 1229 aa8.68□□□□□ -1.02
CASC19-269ENST00000641964 CCDC27Q2M243 656 aa8.68□□□□□ -1.02
CASC19-269ENST00000641964 CAPN5O15484 640 aaPredicted RBP8.66□□□□□ -1.02
CASC19-269ENST00000641964 HMGB1P09429 215 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms