RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 KIAA1210Q9ULL0 1709 aa21.35■■□□□ 1.01
SRRT-219ENST00000641476 TRAK1Q9UPV9 953 aa21.35■■□□□ 1.01
SRRT-219ENST00000641476 STAC3Q96MF2 364 aa21.34■■□□□ 1.01
SRRT-219ENST00000641476 EIF3AQ14152 1382 aaKnown RBP21.33■■□□□ 1
SRRT-219ENST00000641476 ITSN1Q15811 1721 aa21.32■■□□□ 1
SRRT-219ENST00000641476 NRAPQ86VF7 1730 aa21.32■■□□□ 1
SRRT-219ENST00000641476 HIRIP3Q9BW71 556 aaPredicted RBP21.31■■□□□ 1
SRRT-219ENST00000641476 MINK1Q8N4C8 1332 aaPredicted RBP21.3■■□□□ 1
SRRT-219ENST00000641476 ALS2Q96Q42 1657 aa21.3■■□□□ 1
SRRT-219ENST00000641476 EZH2Q15910 746 aaKnown RBP21.29■■□□□ 1
SRRT-219ENST00000641476 RGPD1P0DJD0 1748 aa21.29■■□□□ 1
SRRT-219ENST00000641476 SPATA31A5Q5VU36 1347 aa21.29■■□□□ 1
SRRT-219ENST00000641476 SPATA31A7Q8IWB4 1347 aa21.29■■□□□ 1
SRRT-219ENST00000641476 PRR36Q9H6K5 1346 aa21.29■■□□□ 1
SRRT-219ENST00000641476 ATP7BP35670 1465 aa21.28■■□□□ 1
SRRT-219ENST00000641476 DISP2A7MBM2 1401 aa21.28■■□□□ 1
SRRT-219ENST00000641476 TOPAZ1Q8N9V7 1692 aa21.27■■□□□ 1
SRRT-219ENST00000641476 COL14A1Q05707 1796 aaKnown RBP21.26■□□□□ 0.99
SRRT-219ENST00000641476 CRYBG1Q9Y4K1 1723 aa21.26■□□□□ 0.99
SRRT-219ENST00000641476 GPRASP1Q5JY77 1395 aa21.25■□□□□ 0.99
SRRT-219ENST00000641476 WASLO00401 505 aaPredicted RBP21.24■□□□□ 0.99
SRRT-219ENST00000641476 PRDM11Q9NQV5 511 aa21.24■□□□□ 0.99
SRRT-219ENST00000641476 TRIM37O94972 964 aa21.23■□□□□ 0.99
SRRT-219ENST00000641476 CAMKK2Q96RR4 588 aa21.23■□□□□ 0.99
SRRT-219ENST00000641476 THSD7AQ9UPZ6 1657 aa21.23■□□□□ 0.99
SRRT-219ENST00000641476 TNS1Q9HBL0 1735 aaKnown RBP21.23■□□□□ 0.99
SRRT-219ENST00000641476 PAK3O75914 559 aaPredicted RBP21.21■□□□□ 0.99
SRRT-219ENST00000641476 APBA3O96018 575 aa21.2■□□□□ 0.98
SRRT-219ENST00000641476 YY1P25490 414 aa21.2■□□□□ 0.98
SRRT-219ENST00000641476 FAM196AQ6ZSG2 479 aa21.2■□□□□ 0.98
SRRT-219ENST00000641476 STRN4Q9NRL3 753 aa21.19■□□□□ 0.98
SRRT-219ENST00000641476 SPATA31A1Q5TZJ5 1347 aa21.19■□□□□ 0.98
SRRT-219ENST00000641476 QRICH2Q9H0J4 1663 aa21.18■□□□□ 0.98
SRRT-219ENST00000641476 NGDNQ8NEJ9 315 aaKnown RBP21.18■□□□□ 0.98
SRRT-219ENST00000641476 CHRNA2Q15822 529 aa21.17■□□□□ 0.98
SRRT-219ENST00000641476 PHRF1Q9P1Y6 1649 aaKnown RBP21.17■□□□□ 0.98
SRRT-219ENST00000641476 TRPM1Q7Z4N2 1603 aa21.16■□□□□ 0.98
SRRT-219ENST00000641476 PARD3Q8TEW0 1356 aa21.16■□□□□ 0.98
SRRT-219ENST00000641476 KIAA0232Q92628 1395 aa21.16■□□□□ 0.98
SRRT-219ENST00000641476 USP35Q9P2H5 1018 aa21.16■□□□□ 0.98
SRRT-219ENST00000641476 NBPF1Q3BBV0 1214 aa21.14■□□□□ 0.97
SRRT-219ENST00000641476 NUDT16Q96DE0 195 aaKnown RBP21.13■□□□□ 0.97
SRRT-219ENST00000641476 POLR3AO14802 1390 aaPredicted RBP21.11■□□□□ 0.97
SRRT-219ENST00000641476 ZC3H6P61129 1189 aaKnown RBP21.11■□□□□ 0.97
SRRT-219ENST00000641476 PDE3BQ13370 1112 aa21.11■□□□□ 0.97
SRRT-219ENST00000641476 NBPF8Q3BBV2 869 aa21.11■□□□□ 0.97
SRRT-219ENST00000641476 NBPF14Q5TI25 921 aa21.11■□□□□ 0.97
SRRT-219ENST00000641476 CDK19Q9BWU1 502 aa21.11■□□□□ 0.97
SRRT-219ENST00000641476 PPP1R1BQ9UD71 204 aaPredicted RBP21.11■□□□□ 0.97
SRRT-219ENST00000641476 NUTM2GQ5VZR2 741 aa21.09■□□□□ 0.97
SRRT-219ENST00000641476 NRKQ7Z2Y5 1582 aa21.09■□□□□ 0.97
SRRT-219ENST00000641476 CENPJQ9HC77 1338 aaPredicted RBP21.08■□□□□ 0.97
SRRT-219ENST00000641476 EVA1CP58658 441 aa21.08■□□□□ 0.97
SRRT-219ENST00000641476 L3MBTL2Q969R5 705 aa21.08■□□□□ 0.97
SRRT-219ENST00000641476 BARGINQ6ZT62 677 aa21.07■□□□□ 0.96
SRRT-219ENST00000641476 RREB1Q92766 1687 aa21.06■□□□□ 0.96
SRRT-219ENST00000641476 SSH2Q76I76 1423 aa21.06■□□□□ 0.96
SRRT-219ENST00000641476 SPON1Q9HCB6 807 aa21.06■□□□□ 0.96
SRRT-219ENST00000641476 NUP188Q5SRE5 1749 aa21.06■□□□□ 0.96
SRRT-219ENST00000641476 ACEP12821 1306 aa21.05■□□□□ 0.96
SRRT-219ENST00000641476 PPIP5K1Q6PFW1 1433 aa21.05■□□□□ 0.96
SRRT-219ENST00000641476 DCAF8L1A6NGE4 600 aa21.05■□□□□ 0.96
SRRT-219ENST00000641476 SIN3AQ96ST3 1273 aa21.05■□□□□ 0.96
SRRT-219ENST00000641476 CCDC61Q9Y6R9 512 aa21.05■□□□□ 0.96
SRRT-219ENST00000641476 LARP1Q6PKG0 1096 aaKnown RBP21.04■□□□□ 0.96
SRRT-219ENST00000641476 KCNQ2O43526 872 aa21.03■□□□□ 0.96
SRRT-219ENST00000641476 TCP11L2Q8N4U5 519 aa21.03■□□□□ 0.96
SRRT-219ENST00000641476 NINLQ9Y2I6 1382 aa21.02■□□□□ 0.96
SRRT-219ENST00000641476 PLEKHG3A1L390 1219 aa21.02■□□□□ 0.96
SRRT-219ENST00000641476 SRPK2P78362 688 aaKnown RBP21.01■□□□□ 0.95
SRRT-219ENST00000641476 ROCK2O75116 1388 aaKnown RBP21■□□□□ 0.95
SRRT-219ENST00000641476 NEUROD1Q13562 356 aa20.99■□□□□ 0.95
SRRT-219ENST00000641476 CABP2Q9NPB3 220 aa20.99■□□□□ 0.95
SRRT-219ENST00000641476 LMO7Q8WWI1 1683 aa20.99■□□□□ 0.95
SRRT-219ENST00000641476 CAMTA1Q9Y6Y1 1673 aa20.99■□□□□ 0.95
SRRT-219ENST00000641476 ABTB2Q8N961 1025 aa20.97■□□□□ 0.95
SRRT-219ENST00000641476 USP19O94966 1318 aa20.97■□□□□ 0.95
SRRT-219ENST00000641476 USP6P35125 1406 aa20.96■□□□□ 0.95
SRRT-219ENST00000641476 PIK3C2AO00443 1686 aa20.96■□□□□ 0.95
SRRT-219ENST00000641476 AKAP12Q02952 1782 aa20.95■□□□□ 0.94
SRRT-219ENST00000641476 THRAP3Q9Y2W1 955 aaKnown RBP20.95■□□□□ 0.94
SRRT-219ENST00000641476 CPDO75976 1380 aa20.95■□□□□ 0.94
SRRT-219ENST00000641476 BRD4O60885 1362 aaPredicted RBP20.94■□□□□ 0.94
SRRT-219ENST00000641476 ANO8Q9HCE9 1232 aaPredicted RBP20.93■□□□□ 0.94
SRRT-219ENST00000641476 OVOS2A0A0G2JMS6 1433 aa20.93■□□□□ 0.94
SRRT-219ENST00000641476 OVOS2A0A0J9YW53 1432 aa20.93■□□□□ 0.94
SRRT-219ENST00000641476 OVOS2Q6IE36 1432 aa20.93■□□□□ 0.94
SRRT-219ENST00000641476 SLIT3O75094 1523 aa20.93■□□□□ 0.94
SRRT-219ENST00000641476 EVC2Q86UK5 1308 aa20.92■□□□□ 0.94
SRRT-219ENST00000641476 ZBTB7CA1YPR0 619 aa20.91■□□□□ 0.94
SRRT-219ENST00000641476 C11orf95C9JLR9 678 aaPredicted RBP20.91■□□□□ 0.94
SRRT-219ENST00000641476 COL5A2P05997 1499 aaPredicted RBP20.91■□□□□ 0.94
SRRT-219ENST00000641476 CABP1Q9NZU7 370 aa20.9■□□□□ 0.94
SRRT-219ENST00000641476 PARP4Q9UKK3 1724 aaKnown RBP20.9■□□□□ 0.94
SRRT-219ENST00000641476 CRB1P82279 1406 aa20.89■□□□□ 0.94
SRRT-219ENST00000641476 ZBTB7AO95365 584 aa20.89■□□□□ 0.93
SRRT-219ENST00000641476 GCP02774 474 aa20.89■□□□□ 0.93
SRRT-219ENST00000641476 PDGFDQ9GZP0 370 aaPredicted RBP20.89■□□□□ 0.93
SRRT-219ENST00000641476 MON2Q7Z3U7 1717 aa20.88■□□□□ 0.93
SRRT-219ENST00000641476 PLSCR1O15162 318 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms