RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.12■□□□□ 0.01
RBFOX1-224ENST00000641259 A0A1W2PP64 1363 aa15.12■□□□□ 0.01
RBFOX1-224ENST00000641259 NCLP19338 710 aaKnown RBP15.12■□□□□ 0.01
RBFOX1-224ENST00000641259 USP32Q8NFA0 1604 aa15.12■□□□□ 0.01
RBFOX1-224ENST00000641259 TXNDC2Q86VQ3 553 aa15.11■□□□□ 0.01
RBFOX1-224ENST00000641259 KNDC1Q76NI1 1749 aa15.11■□□□□ 0.01
RBFOX1-224ENST00000641259 ANKRD36BQ8N2N9 1353 aa15.11■□□□□ 0.01
RBFOX1-224ENST00000641259 ABCC11Q96J66 1382 aa15.11■□□□□ 0.01
RBFOX1-224ENST00000641259 BLMP54132 1417 aaPredicted RBP15.11■□□□□ 0.01
RBFOX1-224ENST00000641259 CDK19Q9BWU1 502 aa15.1■□□□□ 0.01
RBFOX1-224ENST00000641259 ADAMTS8Q9UP79 889 aa15.1■□□□□ 0.01
RBFOX1-224ENST00000641259 SLIT1O75093 1534 aa15.09■□□□□ 0.01
RBFOX1-224ENST00000641259 TNNT2P45379 298 aaPredicted RBP15.09■□□□□ 0.01
RBFOX1-224ENST00000641259 TPRNQ4KMQ1 711 aa15.09■□□□□ 0.01
RBFOX1-224ENST00000641259 CPS1P31327 1500 aa15.09■□□□□ 0.01
RBFOX1-224ENST00000641259 PUS7Q96PZ0 661 aaKnown RBP15.08■□□□□ 0.01
RBFOX1-224ENST00000641259 ARHGAP23Q9P227 1491 aa15.08■□□□□ 0.01
RBFOX1-224ENST00000641259 ROBO2Q9HCK4 1378 aa15.08■□□□□ 0
RBFOX1-224ENST00000641259 PLEKHG1Q9ULL1 1385 aa15.08■□□□□ 0
RBFOX1-224ENST00000641259 PTPRUQ92729 1446 aa15.08■□□□□ 0
RBFOX1-224ENST00000641259 MS4A1P11836 297 aa15.07■□□□□ 0
RBFOX1-224ENST00000641259 FAM161AQ3B820 660 aa15.07■□□□□ 0
RBFOX1-224ENST00000641259 SLC26A8Q96RN1 970 aa15.07■□□□□ 0
RBFOX1-224ENST00000641259 FOXD4L1Q9NU39 408 aa15.07■□□□□ 0
RBFOX1-224ENST00000641259 MED14O60244 1454 aa15.07■□□□□ 0
RBFOX1-224ENST00000641259 ADAMTSL3P82987 1691 aa15.07■□□□□ 0
RBFOX1-224ENST00000641259 TECPR2O15040 1411 aa15.07■□□□□ 0
RBFOX1-224ENST00000641259 NCKAP5LQ9HCH0 1330 aa15.06■□□□□ 0
RBFOX1-224ENST00000641259 DNTTIP2Q5QJE6 756 aaKnown RBP15.06■□□□□ 0
RBFOX1-224ENST00000641259 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.06■□□□□ 0
RBFOX1-224ENST00000641259 MSNP26038 577 aaKnown RBP15.06■□□□□ 0
RBFOX1-224ENST00000641259 SHPRHQ149N8 1683 aa15.06■□□□□ 0
RBFOX1-224ENST00000641259 CABP1Q9NZU7 370 aa15.05■□□□□ 0
RBFOX1-224ENST00000641259 CEP170BQ9Y4F5 1589 aaPredicted RBP15.05■□□□□ -0
RBFOX1-224ENST00000641259 KIAA1211Q6ZU35 1233 aa15.05■□□□□ -0
RBFOX1-224ENST00000641259 SMG6Q86US8 1419 aaKnown RBP15.05■□□□□ -0
RBFOX1-224ENST00000641259 ATAD2Q6PL18 1390 aa15.05■□□□□ -0
RBFOX1-224ENST00000641259 R3HCC1Q9Y3T6 440 aaKnown RBP15.04■□□□□ -0
RBFOX1-224ENST00000641259 XRCC6P12956 609 aaKnown RBP eCLIP15.04■□□□□ -0
RBFOX1-224ENST00000641259 AEBP2Q6ZN18 517 aaPredicted RBP15.04■□□□□ -0
RBFOX1-224ENST00000641259 CGNL1Q0VF96 1302 aa15.03■□□□□ -0
RBFOX1-224ENST00000641259 HDGFP51858 240 aaKnown RBP15.03■□□□□ -0
RBFOX1-224ENST00000641259 BCL11BQ9C0K0 894 aaPredicted RBP15.03■□□□□ -0
RBFOX1-224ENST00000641259 ESPNB1AK53 854 aa15.03■□□□□ -0
RBFOX1-224ENST00000641259 MORC1Q86VD1 984 aa15.03■□□□□ -0
RBFOX1-224ENST00000641259 FAM135BQ49AJ0 1406 aa15.02■□□□□ -0
RBFOX1-224ENST00000641259 NINLQ9Y2I6 1382 aa15.02□□□□□ -0.01
RBFOX1-224ENST00000641259 GGNBP2Q9H3C7 697 aa15.02□□□□□ -0.01
RBFOX1-224ENST00000641259 C20orf194Q5TEA3 1177 aa15.01□□□□□ -0.01
RBFOX1-224ENST00000641259 BBXQ8WY36 941 aaPredicted RBP15.01□□□□□ -0.01
RBFOX1-224ENST00000641259 WASLO00401 505 aaPredicted RBP15.01□□□□□ -0.01
RBFOX1-224ENST00000641259 CCDC146Q8IYE0 955 aa15.01□□□□□ -0.01
RBFOX1-224ENST00000641259 CDK11BP21127 795 aaKnown RBP15□□□□□ -0.01
RBFOX1-224ENST00000641259 ANKRD26Q9UPS8 1709 aa15□□□□□ -0.01
RBFOX1-224ENST00000641259 INSRP06213 1382 aa15□□□□□ -0.01
RBFOX1-224ENST00000641259 WDR43Q15061 677 aaKnown RBP eCLIP14.99□□□□□ -0.01
RBFOX1-224ENST00000641259 EID1Q9Y6B2 187 aa14.99□□□□□ -0.01
RBFOX1-224ENST00000641259 KIF20BQ96Q89 1820 aa14.99□□□□□ -0.01
RBFOX1-224ENST00000641259 PRR36Q9H6K5 1346 aa14.99□□□□□ -0.01
RBFOX1-224ENST00000641259 FYB1O15117 783 aa14.99□□□□□ -0.01
RBFOX1-224ENST00000641259 PPIP5K1Q6PFW1 1433 aa14.99□□□□□ -0.01
RBFOX1-224ENST00000641259 ZNF142P52746 1687 aaPredicted RBP14.98□□□□□ -0.01
RBFOX1-224ENST00000641259 THEMISQ8N1K5 641 aaPredicted RBP14.98□□□□□ -0.01
RBFOX1-224ENST00000641259 ATP7BP35670 1465 aa14.98□□□□□ -0.01
RBFOX1-224ENST00000641259 POLR3AO14802 1390 aaPredicted RBP14.98□□□□□ -0.01
RBFOX1-224ENST00000641259 MTHFSP49914 203 aa14.98□□□□□ -0.01
RBFOX1-224ENST00000641259 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.98□□□□□ -0.01
RBFOX1-224ENST00000641259 AAMPQ13685 434 aa14.97□□□□□ -0.01
RBFOX1-224ENST00000641259 ADGRB2O60241 1585 aa14.97□□□□□ -0.01
RBFOX1-224ENST00000641259 PLCD3Q8N3E9 789 aa14.97□□□□□ -0.01
RBFOX1-224ENST00000641259 SIRT1Q96EB6 747 aa14.97□□□□□ -0.01
RBFOX1-224ENST00000641259 TERF2IPQ9NYB0 399 aa14.97□□□□□ -0.01
RBFOX1-224ENST00000641259 FBLN1P23142 703 aa14.96□□□□□ -0.01
RBFOX1-224ENST00000641259 AMOTL2Q9Y2J4 779 aa14.96□□□□□ -0.01
RBFOX1-224ENST00000641259 CPSF1Q10570 1443 aaKnown RBP14.96□□□□□ -0.01
RBFOX1-224ENST00000641259 NUTM2FA1L443 756 aa14.96□□□□□ -0.01
RBFOX1-224ENST00000641259 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.96□□□□□ -0.01
RBFOX1-224ENST00000641259 NSD2O96028 1365 aa14.96□□□□□ -0.01
RBFOX1-224ENST00000641259 XRN1Q8IZH2 1706 aaKnown RBP14.96□□□□□ -0.01
RBFOX1-224ENST00000641259 NUDT16Q96DE0 195 aaKnown RBP14.96□□□□□ -0.02
RBFOX1-224ENST00000641259 CLCN1P35523 988 aa14.95□□□□□ -0.02
RBFOX1-224ENST00000641259 TOPAZ1Q8N9V7 1692 aa14.95□□□□□ -0.02
RBFOX1-224ENST00000641259 CDC42BPGQ6DT37 1551 aa14.95□□□□□ -0.02
RBFOX1-224ENST00000641259 TRAK2O60296 914 aa14.95□□□□□ -0.02
RBFOX1-224ENST00000641259 MPNDQ8N594 471 aa14.95□□□□□ -0.02
RBFOX1-224ENST00000641259 CHMP4BQ9H444 224 aaKnown RBP14.94□□□□□ -0.02
RBFOX1-224ENST00000641259 MON2Q7Z3U7 1717 aa14.94□□□□□ -0.02
RBFOX1-224ENST00000641259 NKTRP30414 1462 aaKnown RBP14.94□□□□□ -0.02
RBFOX1-224ENST00000641259 PTMAP06454 111 aaKnown RBP14.94□□□□□ -0.02
RBFOX1-224ENST00000641259 HDGFL2Q7Z4V5 671 aaPredicted RBP14.94□□□□□ -0.02
RBFOX1-224ENST00000641259 ZRANB1Q9UGI0 708 aa14.94□□□□□ -0.02
RBFOX1-224ENST00000641259 DIP2AQ14689 1571 aa14.94□□□□□ -0.02
RBFOX1-224ENST00000641259 AKAP12Q02952 1782 aa14.94□□□□□ -0.02
RBFOX1-224ENST00000641259 MFAP1P55081 439 aaKnown RBP14.94□□□□□ -0.02
RBFOX1-224ENST00000641259 TBX22Q9Y458 520 aa14.94□□□□□ -0.02
RBFOX1-224ENST00000641259 FGD1P98174 961 aa14.93□□□□□ -0.02
RBFOX1-224ENST00000641259 PDCL3Q9H2J4 239 aa14.93□□□□□ -0.02
RBFOX1-224ENST00000641259 ZNF521Q96K83 1311 aa14.93□□□□□ -0.02
RBFOX1-224ENST00000641259 COL3A1P02461 1466 aaPredicted RBP14.93□□□□□ -0.02
RBFOX1-224ENST00000641259 NEUROD2Q15784 382 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms