RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 SBNO1A3KN83 1393 aa12.53□□□□□ -0.4
SCARB2-226ENST00000640916 UTRNP46939 3433 aa12.52□□□□□ -0.4
SCARB2-226ENST00000640916 COL14A1Q05707 1796 aaKnown RBP12.52□□□□□ -0.41
SCARB2-226ENST00000640916 PLEKHG5O94827 1062 aa12.52□□□□□ -0.41
SCARB2-226ENST00000640916 TRIM37O94972 964 aa12.52□□□□□ -0.41
SCARB2-226ENST00000640916 ZNF784Q8NCA9 323 aaPredicted RBP12.52□□□□□ -0.41
SCARB2-226ENST00000640916 BTG4Q9NY30 223 aa12.52□□□□□ -0.41
SCARB2-226ENST00000640916 SPATA31A5Q5VU36 1347 aa12.52□□□□□ -0.41
SCARB2-226ENST00000640916 SPATA31A7Q8IWB4 1347 aa12.52□□□□□ -0.41
SCARB2-226ENST00000640916 ADGRB2O60241 1585 aa12.52□□□□□ -0.41
SCARB2-226ENST00000640916 HAP1P54257 671 aaPredicted RBP12.51□□□□□ -0.41
SCARB2-226ENST00000640916 RPGRIP1LQ68CZ1 1315 aa12.51□□□□□ -0.41
SCARB2-226ENST00000640916 NINLQ9Y2I6 1382 aa12.51□□□□□ -0.41
SCARB2-226ENST00000640916 NRXN1Q9ULB1 1477 aa12.51□□□□□ -0.41
SCARB2-226ENST00000640916 TRPM3Q9HCF6 1732 aaPredicted RBP12.51□□□□□ -0.41
SCARB2-226ENST00000640916 PARD3Q8TEW0 1356 aa12.5□□□□□ -0.41
SCARB2-226ENST00000640916 CRYBG1Q9Y4K1 1723 aa12.5□□□□□ -0.41
SCARB2-226ENST00000640916 ALS2Q96Q42 1657 aa12.49□□□□□ -0.41
SCARB2-226ENST00000640916 ABCC11Q96J66 1382 aa12.49□□□□□ -0.41
SCARB2-226ENST00000640916 STK26Q9P289 416 aa12.49□□□□□ -0.41
SCARB2-226ENST00000640916 PHF8Q9UPP1 1060 aa12.49□□□□□ -0.41
SCARB2-226ENST00000640916 ARHGEF10O15013 1369 aa12.48□□□□□ -0.41
SCARB2-226ENST00000640916 ADGRF5Q8IZF2 1346 aa12.48□□□□□ -0.41
SCARB2-226ENST00000640916 KCNQ2O43526 872 aa12.48□□□□□ -0.41
SCARB2-226ENST00000640916 APBA3O96018 575 aa12.48□□□□□ -0.41
SCARB2-226ENST00000640916 PSME1Q06323 249 aa12.48□□□□□ -0.41
SCARB2-226ENST00000640916 SENP3-EIF4A1A0A087X0R7 540 aa12.47□□□□□ -0.41
SCARB2-226ENST00000640916 MKRN4PQ13434 485 aaPredicted RBP12.47□□□□□ -0.41
SCARB2-226ENST00000640916 FAM196AQ6ZSG2 479 aa12.47□□□□□ -0.41
SCARB2-226ENST00000640916 SPON1Q9HCB6 807 aa12.47□□□□□ -0.41
SCARB2-226ENST00000640916 CHD4Q14839 1912 aa12.47□□□□□ -0.41
SCARB2-226ENST00000640916 CASZ1Q86V15 1759 aa12.46□□□□□ -0.41
SCARB2-226ENST00000640916 TMEM132EQ6IEE7 984 aa12.46□□□□□ -0.41
SCARB2-226ENST00000640916 RRBP1Q9P2E9 1410 aaKnown RBP12.45□□□□□ -0.42
SCARB2-226ENST00000640916 C1QTNF8P60827 252 aa12.45□□□□□ -0.42
SCARB2-226ENST00000640916 LMOD2Q6P5Q4 547 aa12.45□□□□□ -0.42
SCARB2-226ENST00000640916 PPP1R1BQ9UD71 204 aaPredicted RBP12.45□□□□□ -0.42
SCARB2-226ENST00000640916 SPATA31A1Q5TZJ5 1347 aa12.44□□□□□ -0.42
SCARB2-226ENST00000640916 NRKQ7Z2Y5 1582 aa12.43□□□□□ -0.42
SCARB2-226ENST00000640916 MYOM1P52179 1685 aa12.42□□□□□ -0.42
SCARB2-226ENST00000640916 NBPF8Q3BBV2 869 aa12.42□□□□□ -0.42
SCARB2-226ENST00000640916 NBPF14Q5TI25 921 aa12.42□□□□□ -0.42
SCARB2-226ENST00000640916 SIRT1Q96EB6 747 aa12.42□□□□□ -0.42
SCARB2-226ENST00000640916 YTHDC2Q9H6S0 1430 aaKnown RBP12.42□□□□□ -0.42
SCARB2-226ENST00000640916 CEP350Q5VT06 3117 aa12.42□□□□□ -0.42
SCARB2-226ENST00000640916 ITGAEP38570 1179 aa12.41□□□□□ -0.42
SCARB2-226ENST00000640916 PMFBP1Q8TBY8 1022 aa12.41□□□□□ -0.42
SCARB2-226ENST00000640916 PDGFDQ9GZP0 370 aaPredicted RBP12.41□□□□□ -0.42
SCARB2-226ENST00000640916 SBF2Q86WG5 1849 aa12.39□□□□□ -0.43
SCARB2-226ENST00000640916 PIK3C2GO75747 1445 aa12.39□□□□□ -0.43
SCARB2-226ENST00000640916 RGPD3A6NKT7 1758 aaPredicted RBP12.39□□□□□ -0.43
SCARB2-226ENST00000640916 RGPD4Q7Z3J3 1758 aa12.39□□□□□ -0.43
SCARB2-226ENST00000640916 PTGER2P43116 358 aa12.38□□□□□ -0.43
SCARB2-226ENST00000640916 ANO8Q9HCE9 1232 aaPredicted RBP12.38□□□□□ -0.43
SCARB2-226ENST00000640916 SPATA31E1Q6ZUB1 1445 aa12.37□□□□□ -0.43
SCARB2-226ENST00000640916 PEAK1Q9H792 1746 aa12.37□□□□□ -0.43
SCARB2-226ENST00000640916 BARGINQ6ZT62 677 aa12.37□□□□□ -0.43
SCARB2-226ENST00000640916 ANKARQ7Z5J8 1434 aa12.37□□□□□ -0.43
SCARB2-226ENST00000640916 KIAA0232Q92628 1395 aa12.36□□□□□ -0.43
SCARB2-226ENST00000640916 CHRNA2Q15822 529 aa12.36□□□□□ -0.43
SCARB2-226ENST00000640916 PRDM11Q9NQV5 511 aa12.36□□□□□ -0.43
SCARB2-226ENST00000640916 ZBTB12Q9Y330 459 aaPredicted RBP12.36□□□□□ -0.43
SCARB2-226ENST00000640916 PHRF1Q9P1Y6 1649 aaKnown RBP12.36□□□□□ -0.43
SCARB2-226ENST00000640916 ACIN1Q9UKV3 1341 aaKnown RBP12.36□□□□□ -0.43
SCARB2-226ENST00000640916 PRR36Q9H6K5 1346 aa12.35□□□□□ -0.43
SCARB2-226ENST00000640916 PARP4Q9UKK3 1724 aaKnown RBP12.34□□□□□ -0.43
SCARB2-226ENST00000640916 ANKRD30BQ9BXX2 1392 aa12.34□□□□□ -0.43
SCARB2-226ENST00000640916 PDE3BQ13370 1112 aa12.34□□□□□ -0.43
SCARB2-226ENST00000640916 PROM2Q8N271 834 aa12.34□□□□□ -0.43
SCARB2-226ENST00000640916 SYT17Q9BSW7 474 aa12.34□□□□□ -0.43
SCARB2-226ENST00000640916 STRN4Q9NRL3 753 aa12.34□□□□□ -0.43
SCARB2-226ENST00000640916 ZBTB7AO95365 584 aa12.33□□□□□ -0.44
SCARB2-226ENST00000640916 SAFB2Q14151 953 aaKnown RBP eCLIP12.33□□□□□ -0.44
SCARB2-226ENST00000640916 RGL3Q3MIN7 710 aa12.33□□□□□ -0.44
SCARB2-226ENST00000640916 PTF1AQ7RTS3 328 aa12.33□□□□□ -0.44
SCARB2-226ENST00000640916 PRAM1Q96QH2 718 aa12.33□□□□□ -0.44
SCARB2-226ENST00000640916 SGIP1Q9BQI5 828 aa12.33□□□□□ -0.44
SCARB2-226ENST00000640916 FHDC1Q9C0D6 1143 aaPredicted RBP12.33□□□□□ -0.44
SCARB2-226ENST00000640916 C14orf93Q9H972 538 aaKnown RBP12.33□□□□□ -0.44
SCARB2-226ENST00000640916 USP35Q9P2H5 1018 aa12.33□□□□□ -0.44
SCARB2-226ENST00000640916 SSH2Q76I76 1423 aa12.33□□□□□ -0.44
SCARB2-226ENST00000640916 LMO7Q8WWI1 1683 aa12.32□□□□□ -0.44
SCARB2-226ENST00000640916 PLSCR1O15162 318 aa12.32□□□□□ -0.44
SCARB2-226ENST00000640916 GPRASP1Q5JY77 1395 aa12.31□□□□□ -0.44
SCARB2-226ENST00000640916 LARP1Q6PKG0 1096 aaKnown RBP12.31□□□□□ -0.44
SCARB2-226ENST00000640916 TCP11L2Q8N4U5 519 aa12.3□□□□□ -0.44
SCARB2-226ENST00000640916 DLC1Q96QB1 1528 aa12.3□□□□□ -0.44
SCARB2-226ENST00000640916 SHANK3Q9BYB0 1731 aa12.29□□□□□ -0.44
SCARB2-226ENST00000640916 ZC3H6P61129 1189 aaKnown RBP12.29□□□□□ -0.44
SCARB2-226ENST00000640916 CFAP70Q5T0N1 1121 aa12.29□□□□□ -0.44
SCARB2-226ENST00000640916 DHX57Q6P158 1386 aaKnown RBP12.29□□□□□ -0.44
SCARB2-226ENST00000640916 TULP4Q9NRJ4 1543 aa12.28□□□□□ -0.44
SCARB2-226ENST00000640916 GOLGB1Q14789 3259 aaKnown RBP12.28□□□□□ -0.44
SCARB2-226ENST00000640916 LRRC37A3O60309 1634 aa12.27□□□□□ -0.44
SCARB2-226ENST00000640916 PAK3O75914 559 aaPredicted RBP12.27□□□□□ -0.45
SCARB2-226ENST00000640916 HIRIP3Q9BW71 556 aaPredicted RBP12.27□□□□□ -0.45
SCARB2-226ENST00000640916 GIGYF1O75420 1035 aaPredicted RBP12.26□□□□□ -0.45
SCARB2-226ENST00000640916 EVA1CP58658 441 aa12.26□□□□□ -0.45
SCARB2-226ENST00000640916 THRAP3Q9Y2W1 955 aaKnown RBP12.26□□□□□ -0.45
SCARB2-226ENST00000640916 OVOS2A0A0G2JMS6 1433 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms