RNA–Protein interactions for RNA: ENST00000640688.1

GABRD-216, Transcript of gamma-aminobutyric acid type A receptor delta subunit, humanhuman

TSL 3

Gene GABRD, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRD-216ENST00000640688 ATP7BP35670 1465 aa28.83■■■□□ 2.21
GABRD-216ENST00000640688 DEFB132Q7Z7B7 95 aa28.82■■■□□ 2.2
GABRD-216ENST00000640688 COL14A1Q05707 1796 aaKnown RBP28.81■■■□□ 2.2
GABRD-216ENST00000640688 PAK3O75914 559 aaPredicted RBP28.8■■■□□ 2.2
GABRD-216ENST00000640688 NUDT16Q96DE0 195 aaKnown RBP28.8■■■□□ 2.2
GABRD-216ENST00000640688 ITSN1Q15811 1721 aa28.79■■■□□ 2.2
GABRD-216ENST00000640688 KRT27Q7Z3Y8 459 aa28.78■■■□□ 2.2
GABRD-216ENST00000640688 FAM98CQ17RN3 349 aaKnown RBP28.77■■■□□ 2.2
GABRD-216ENST00000640688 CDK19Q9BWU1 502 aa28.76■■■□□ 2.19
GABRD-216ENST00000640688 A0A0G2JS52 829 aa28.74■■■□□ 2.19
GABRD-216ENST00000640688 MYT1Q01538 1121 aa28.74■■■□□ 2.19
GABRD-216ENST00000640688 NBPF1Q3BBV0 1214 aa28.73■■■□□ 2.19
GABRD-216ENST00000640688 KIAA1210Q9ULL0 1709 aa28.73■■■□□ 2.19
GABRD-216ENST00000640688 TOPAZ1Q8N9V7 1692 aa28.73■■■□□ 2.19
GABRD-216ENST00000640688 NUTM2GQ5VZR2 741 aa28.71■■■□□ 2.19
GABRD-216ENST00000640688 PHRF1Q9P1Y6 1649 aaKnown RBP28.71■■■□□ 2.19
GABRD-216ENST00000640688 PRDM11Q9NQV5 511 aa28.7■■■□□ 2.18
GABRD-216ENST00000640688 SPATA31A5Q5VU36 1347 aa28.69■■■□□ 2.18
GABRD-216ENST00000640688 SPATA31A7Q8IWB4 1347 aa28.69■■■□□ 2.18
GABRD-216ENST00000640688 SF3B2Q13435 895 aaKnown RBP28.69■■■□□ 2.18
GABRD-216ENST00000640688 FAM182BQ5T319 152 aa28.69■■■□□ 2.18
GABRD-216ENST00000640688 KIAA0232Q92628 1395 aa28.68■■■□□ 2.18
GABRD-216ENST00000640688 ACEP12821 1306 aa28.68■■■□□ 2.18
GABRD-216ENST00000640688 POLR3AO14802 1390 aaPredicted RBP28.67■■■□□ 2.18
GABRD-216ENST00000640688 CHRNA2Q15822 529 aa28.67■■■□□ 2.18
GABRD-216ENST00000640688 THSD7AQ9UPZ6 1657 aa28.65■■■□□ 2.18
GABRD-216ENST00000640688 NBPF8Q3BBV2 869 aa28.65■■■□□ 2.18
GABRD-216ENST00000640688 ZC3H6P61129 1189 aaKnown RBP28.64■■■□□ 2.18
GABRD-216ENST00000640688 CCDC61Q9Y6R9 512 aa28.64■■■□□ 2.18
GABRD-216ENST00000640688 PLEKHG3A1L390 1219 aa28.62■■■□□ 2.17
GABRD-216ENST00000640688 STRN4Q9NRL3 753 aa28.6■■■□□ 2.17
GABRD-216ENST00000640688 SPATA31A1Q5TZJ5 1347 aa28.6■■■□□ 2.17
GABRD-216ENST00000640688 NRKQ7Z2Y5 1582 aa28.58■■■□□ 2.17
GABRD-216ENST00000640688 RGPD1P0DJD0 1748 aa28.57■■■□□ 2.16
GABRD-216ENST00000640688 BAG6P46379 1132 aa28.56■■■□□ 2.16
GABRD-216ENST00000640688 ABTB2Q8N961 1025 aa28.56■■■□□ 2.16
GABRD-216ENST00000640688 CENPJQ9HC77 1338 aaPredicted RBP28.56■■■□□ 2.16
GABRD-216ENST00000640688 CABP2Q9NPB3 220 aa28.56■■■□□ 2.16
GABRD-216ENST00000640688 QRICH2Q9H0J4 1663 aa28.55■■■□□ 2.16
GABRD-216ENST00000640688 PPIP5K1Q6PFW1 1433 aa28.55■■■□□ 2.16
GABRD-216ENST00000640688 SRPK2P78362 688 aaKnown RBP28.55■■■□□ 2.16
GABRD-216ENST00000640688 EN1Q05925 392 aaPredicted RBP28.55■■■□□ 2.16
GABRD-216ENST00000640688 TNS1Q9HBL0 1735 aaKnown RBP28.55■■■□□ 2.16
GABRD-216ENST00000640688 PSDA5PKW4 1024 aaPredicted RBP28.54■■■□□ 2.16
GABRD-216ENST00000640688 CAMTA1Q9Y6Y1 1673 aa28.54■■■□□ 2.16
GABRD-216ENST00000640688 USP35Q9P2H5 1018 aa28.53■■■□□ 2.16
GABRD-216ENST00000640688 SSH2Q76I76 1423 aa28.52■■■□□ 2.16
GABRD-216ENST00000640688 LMO7Q8WWI1 1683 aa28.51■■■□□ 2.16
GABRD-216ENST00000640688 USP19O94966 1318 aa28.51■■■□□ 2.15
GABRD-216ENST00000640688 L3MBTL2Q969R5 705 aa28.51■■■□□ 2.15
GABRD-216ENST00000640688 LARP1Q6PKG0 1096 aaKnown RBP28.49■■■□□ 2.15
GABRD-216ENST00000640688 EVA1CP58658 441 aa28.48■■■□□ 2.15
GABRD-216ENST00000640688 SIN3AQ96ST3 1273 aa28.48■■■□□ 2.15
GABRD-216ENST00000640688 CPDO75976 1380 aa28.48■■■□□ 2.15
GABRD-216ENST00000640688 GCP02774 474 aa28.46■■■□□ 2.15
GABRD-216ENST00000640688 CABP1Q9NZU7 370 aa28.46■■■□□ 2.15
GABRD-216ENST00000640688 LRP5O75197 1615 aa28.46■■■□□ 2.15
GABRD-216ENST00000640688 DISP2A7MBM2 1401 aa28.45■■■□□ 2.15
GABRD-216ENST00000640688 TRPM1Q7Z4N2 1603 aa28.45■■■□□ 2.14
GABRD-216ENST00000640688 TRIM37O94972 964 aa28.45■■■□□ 2.14
GABRD-216ENST00000640688 EZH2Q15910 746 aaKnown RBP28.44■■■□□ 2.14
GABRD-216ENST00000640688 NLRP13Q86W25 1043 aa28.44■■■□□ 2.14
GABRD-216ENST00000640688 BARGINQ6ZT62 677 aa28.43■■■□□ 2.14
GABRD-216ENST00000640688 FAM196AQ6ZSG2 479 aa28.42■■■□□ 2.14
GABRD-216ENST00000640688 USP6P35125 1406 aa28.42■■■□□ 2.14
GABRD-216ENST00000640688 COL5A2P05997 1499 aaPredicted RBP28.4■■■□□ 2.14
GABRD-216ENST00000640688 R3HDM1Q15032 1099 aaKnown RBP28.39■■■□□ 2.14
GABRD-216ENST00000640688 TCP11L2Q8N4U5 519 aa28.39■■■□□ 2.14
GABRD-216ENST00000640688 CAMKK2Q96RR4 588 aa28.39■■■□□ 2.14
GABRD-216ENST00000640688 PIK3C2AO00443 1686 aa28.38■■■□□ 2.13
GABRD-216ENST00000640688 ZBTB7CA1YPR0 619 aa28.38■■■□□ 2.13
GABRD-216ENST00000640688 NEUROD1Q13562 356 aa28.38■■■□□ 2.13
GABRD-216ENST00000640688 NLRP6P59044 892 aa28.37■■■□□ 2.13
GABRD-216ENST00000640688 PDE3BQ13370 1112 aa28.37■■■□□ 2.13
GABRD-216ENST00000640688 SLIT3O75094 1523 aa28.37■■■□□ 2.13
GABRD-216ENST00000640688 BRD4O60885 1362 aaPredicted RBP28.37■■■□□ 2.13
GABRD-216ENST00000640688 APBA3O96018 575 aa28.35■■■□□ 2.13
GABRD-216ENST00000640688 EVC2Q86UK5 1308 aa28.35■■■□□ 2.13
GABRD-216ENST00000640688 PARP4Q9UKK3 1724 aaKnown RBP28.34■■■□□ 2.13
GABRD-216ENST00000640688 COL18A1P39060 1754 aa28.33■■■□□ 2.13
GABRD-216ENST00000640688 ROCK2O75116 1388 aaKnown RBP28.33■■■□□ 2.13
GABRD-216ENST00000640688 THRAP3Q9Y2W1 955 aaKnown RBP28.32■■■□□ 2.12
GABRD-216ENST00000640688 CRB1P82279 1406 aa28.31■■■□□ 2.12
GABRD-216ENST00000640688 RREB1Q92766 1687 aa28.31■■■□□ 2.12
GABRD-216ENST00000640688 AKAP12Q02952 1782 aa28.31■■■□□ 2.12
GABRD-216ENST00000640688 AATKQ6ZMQ8 1374 aa28.3■■■□□ 2.12
GABRD-216ENST00000640688 AXIN2Q9Y2T1 843 aa28.29■■■□□ 2.12
GABRD-216ENST00000640688 NUP188Q5SRE5 1749 aa28.28■■■□□ 2.12
GABRD-216ENST00000640688 TTC21BQ7Z4L5 1316 aa28.27■■■□□ 2.12
GABRD-216ENST00000640688 RGPD5Q99666 1765 aa28.27■■■□□ 2.12
GABRD-216ENST00000640688 PEAK1Q9H792 1746 aa28.26■■■□□ 2.11
GABRD-216ENST00000640688 LRRC37A3O60309 1634 aa28.25■■■□□ 2.11
GABRD-216ENST00000640688 PARD3Q8TEW0 1356 aa28.24■■■□□ 2.11
GABRD-216ENST00000640688 SOX12O15370 315 aa28.24■■■□□ 2.11
GABRD-216ENST00000640688 TOM1L2Q6ZVM7 507 aa28.23■■■□□ 2.11
GABRD-216ENST00000640688 CPSF1Q10570 1443 aaKnown RBP28.23■■■□□ 2.11
GABRD-216ENST00000640688 WNK3Q9BYP7 1800 aa28.22■■■□□ 2.11
GABRD-216ENST00000640688 ZNF692Q9BU19 519 aaPredicted RBP28.22■■■□□ 2.11
GABRD-216ENST00000640688 SBF2Q86WG5 1849 aa28.21■■■□□ 2.11
GABRD-216ENST00000640688 ARHGEF25Q86VW2 580 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms