RNA–Protein interactions for RNA: ENST00000640483.1

CACNA1D-230, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS ALT2 TSL 5

Gene CACNA1D, Length 5,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-230ENST00000640483 GLIPR1L2Q4G1C9 344 aa11.4□□□□□ -0.58
CACNA1D-230ENST00000640483 NBPF14Q5TI25 921 aa11.4□□□□□ -0.58
CACNA1D-230ENST00000640483 ADAMTS2O95450 1211 aa11.4□□□□□ -0.58
CACNA1D-230ENST00000640483 PDE4CQ08493 712 aa11.4□□□□□ -0.58
CACNA1D-230ENST00000640483 TBC1D2BQ9UPU7 963 aa11.4□□□□□ -0.58
CACNA1D-230ENST00000640483 CREBRFQ8IUR6 639 aa11.4□□□□□ -0.59
CACNA1D-230ENST00000640483 ZC3H6P61129 1189 aaKnown RBP11.39□□□□□ -0.59
CACNA1D-230ENST00000640483 UBAP1LF5GYI3 381 aa11.39□□□□□ -0.59
CACNA1D-230ENST00000640483 WDR7Q9Y4E6 1490 aa11.39□□□□□ -0.59
CACNA1D-230ENST00000640483 ASXL2Q76L83 1435 aa11.39□□□□□ -0.59
CACNA1D-230ENST00000640483 CPLX1O14810 134 aa11.39□□□□□ -0.59
CACNA1D-230ENST00000640483 PRKAR2BP31323 418 aa11.39□□□□□ -0.59
CACNA1D-230ENST00000640483 WASHC4Q2M389 1173 aa11.39□□□□□ -0.59
CACNA1D-230ENST00000640483 CEBPAP49715 358 aaPredicted RBP11.38□□□□□ -0.59
CACNA1D-230ENST00000640483 PCF11O94913 1555 aaKnown RBP11.38□□□□□ -0.59
CACNA1D-230ENST00000640483 CNTLNQ9NXG0 1405 aa11.38□□□□□ -0.59
CACNA1D-230ENST00000640483 COG6Q9Y2V7 657 aa11.38□□□□□ -0.59
CACNA1D-230ENST00000640483 ANO2Q9NQ90 1003 aa11.38□□□□□ -0.59
CACNA1D-230ENST00000640483 CNNM1Q9NRU3 951 aa11.38□□□□□ -0.59
CACNA1D-230ENST00000640483 NUDT16Q96DE0 195 aaKnown RBP11.38□□□□□ -0.59
CACNA1D-230ENST00000640483 CHD1O14646 1710 aa11.38□□□□□ -0.59
CACNA1D-230ENST00000640483 IKQ13123 557 aaPredicted RBP11.38□□□□□ -0.59
CACNA1D-230ENST00000640483 CCDC7Q96M83 1385 aa11.37□□□□□ -0.59
CACNA1D-230ENST00000640483 SULT6B1Q6IMI4 303 aa11.37□□□□□ -0.59
CACNA1D-230ENST00000640483 KIF7Q2M1P5 1343 aa11.37□□□□□ -0.59
CACNA1D-230ENST00000640483 CENPQQ7L2Z9 268 aaPredicted RBP11.37□□□□□ -0.59
CACNA1D-230ENST00000640483 DNAJC5Q9H3Z4 198 aa11.37□□□□□ -0.59
CACNA1D-230ENST00000640483 REC8O95072 547 aa11.37□□□□□ -0.59
CACNA1D-230ENST00000640483 TPD52L1Q16890 204 aaPredicted RBP11.36□□□□□ -0.59
CACNA1D-230ENST00000640483 CCDC47Q96A33 483 aaKnown RBP11.36□□□□□ -0.59
CACNA1D-230ENST00000640483 FANCAO15360 1455 aa11.36□□□□□ -0.59
CACNA1D-230ENST00000640483 SLC3A2P08195 630 aaKnown RBP11.36□□□□□ -0.59
CACNA1D-230ENST00000640483 TPM2P07951 284 aa11.36□□□□□ -0.59
CACNA1D-230ENST00000640483 GNAI3P08754 354 aa11.36□□□□□ -0.59
CACNA1D-230ENST00000640483 DEKP35659 375 aaKnown RBP11.36□□□□□ -0.59
CACNA1D-230ENST00000640483 AMER1Q5JTC6 1135 aaPredicted RBP11.36□□□□□ -0.59
CACNA1D-230ENST00000640483 DISP1Q96F81 1524 aa11.36□□□□□ -0.59
CACNA1D-230ENST00000640483 UHRF1BP1LA0JNW5 1464 aa11.36□□□□□ -0.59
CACNA1D-230ENST00000640483 AMOTL2Q9Y2J4 779 aa11.36□□□□□ -0.59
CACNA1D-230ENST00000640483 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.36□□□□□ -0.59
CACNA1D-230ENST00000640483 ATP10BO94823 1461 aa11.36□□□□□ -0.59
CACNA1D-230ENST00000640483 CCDC61Q9Y6R9 512 aa11.35□□□□□ -0.59
CACNA1D-230ENST00000640483 RALYLQ86SE5 291 aaKnown RBP11.35□□□□□ -0.59
CACNA1D-230ENST00000640483 SLC12A5Q9H2X9 1139 aa11.35□□□□□ -0.59
CACNA1D-230ENST00000640483 STARD3NLO95772 234 aa11.35□□□□□ -0.59
CACNA1D-230ENST00000640483 POLD1P28340 1107 aa11.35□□□□□ -0.59
CACNA1D-230ENST00000640483 ATP6V1DQ9Y5K8 247 aa11.35□□□□□ -0.59
CACNA1D-230ENST00000640483 MCTP1Q6DN14 999 aa11.35□□□□□ -0.59
CACNA1D-230ENST00000640483 PHF8Q9UPP1 1060 aa11.35□□□□□ -0.59
CACNA1D-230ENST00000640483 NBPF1Q3BBV0 1214 aa11.34□□□□□ -0.59
CACNA1D-230ENST00000640483 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.34□□□□□ -0.59
CACNA1D-230ENST00000640483 RBM5P52756 815 aaKnown RBP eCLIP11.34□□□□□ -0.59
CACNA1D-230ENST00000640483 HDGFL1Q5TGJ6 251 aa11.34□□□□□ -0.59
CACNA1D-230ENST00000640483 TMOD3Q9NYL9 352 aa11.34□□□□□ -0.59
CACNA1D-230ENST00000640483 MSH6P52701 1360 aa11.34□□□□□ -0.59
CACNA1D-230ENST00000640483 SLKQ9H2G2 1235 aaPredicted RBP11.34□□□□□ -0.59
CACNA1D-230ENST00000640483 ZNF652Q9Y2D9 606 aa11.34□□□□□ -0.59
CACNA1D-230ENST00000640483 PPM1FP49593 454 aaPredicted RBP11.33□□□□□ -0.59
CACNA1D-230ENST00000640483 CADPS2Q86UW7 1296 aa11.33□□□□□ -0.59
CACNA1D-230ENST00000640483 BCL11BQ9C0K0 894 aaPredicted RBP11.33□□□□□ -0.59
CACNA1D-230ENST00000640483 CAMSAP2Q08AD1 1489 aa11.33□□□□□ -0.6
CACNA1D-230ENST00000640483 NINLQ9Y2I6 1382 aa11.33□□□□□ -0.6
CACNA1D-230ENST00000640483 ZPR1O75312 459 aa11.33□□□□□ -0.6
CACNA1D-230ENST00000640483 MSNP26038 577 aaKnown RBP11.33□□□□□ -0.6
CACNA1D-230ENST00000640483 RRP1P56182 461 aaKnown RBP11.33□□□□□ -0.6
CACNA1D-230ENST00000640483 CCDC158Q5M9N0 1113 aa11.33□□□□□ -0.6
CACNA1D-230ENST00000640483 TTC39AQ5SRH9 613 aa11.33□□□□□ -0.6
CACNA1D-230ENST00000640483 PES1O00541 588 aaKnown RBP11.33□□□□□ -0.6
CACNA1D-230ENST00000640483 ERC1Q8IUD2 1116 aa11.33□□□□□ -0.6
CACNA1D-230ENST00000640483 MPHOSPH8Q99549 860 aa11.33□□□□□ -0.6
CACNA1D-230ENST00000640483 FOXD4L1Q9NU39 408 aa11.33□□□□□ -0.6
CACNA1D-230ENST00000640483 ZBED9Q6R2W3 1325 aa11.33□□□□□ -0.6
CACNA1D-230ENST00000640483 NUP153P49790 1475 aaKnown RBP11.33□□□□□ -0.6
CACNA1D-230ENST00000640483 BTBD11A6QL63 1104 aa11.33□□□□□ -0.6
CACNA1D-230ENST00000640483 CLEC11AQ9Y240 323 aa11.33□□□□□ -0.6
CACNA1D-230ENST00000640483 TNRQ92752 1358 aa11.32□□□□□ -0.6
CACNA1D-230ENST00000640483 GRM1Q13255 1194 aa11.32□□□□□ -0.6
CACNA1D-230ENST00000640483 FBXO31Q5XUX0 539 aaPredicted RBP11.32□□□□□ -0.6
CACNA1D-230ENST00000640483 BICDL1Q6ZP65 573 aa11.32□□□□□ -0.6
CACNA1D-230ENST00000640483 TMOD2Q9NZR1 351 aa11.32□□□□□ -0.6
CACNA1D-230ENST00000640483 PHF14O94880 888 aa11.32□□□□□ -0.6
CACNA1D-230ENST00000640483 PPP2R1AP30153 589 aa11.32□□□□□ -0.6
CACNA1D-230ENST00000640483 CLASRPQ8N2M8 674 aaKnown RBP11.32□□□□□ -0.6
CACNA1D-230ENST00000640483 SART3Q15020 963 aaKnown RBP11.31□□□□□ -0.6
CACNA1D-230ENST00000640483 SAFBQ15424 915 aaKnown RBP eCLIP11.31□□□□□ -0.6
CACNA1D-230ENST00000640483 TCP11L2Q8N4U5 519 aa11.31□□□□□ -0.6
CACNA1D-230ENST00000640483 MYL6BP14649 208 aa11.31□□□□□ -0.6
CACNA1D-230ENST00000640483 TWISTNBQ3B726 338 aaPredicted RBP11.31□□□□□ -0.6
CACNA1D-230ENST00000640483 CRBNQ96SW2 442 aa11.31□□□□□ -0.6
CACNA1D-230ENST00000640483 BRMS1Q9HCU9 246 aa11.31□□□□□ -0.6
CACNA1D-230ENST00000640483 MPHOSPH10O00566 681 aaKnown RBP11.31□□□□□ -0.6
CACNA1D-230ENST00000640483 SLC4A3P48751 1232 aa11.31□□□□□ -0.6
CACNA1D-230ENST00000640483 RRS1Q15050 365 aaKnown RBP11.31□□□□□ -0.6
CACNA1D-230ENST00000640483 SAMD9Q5K651 1589 aa11.31□□□□□ -0.6
CACNA1D-230ENST00000640483 FAM135AQ9P2D6 1515 aa11.31□□□□□ -0.6
CACNA1D-230ENST00000640483 PLCH2O75038 1416 aa11.31□□□□□ -0.6
CACNA1D-230ENST00000640483 WAPLQ7Z5K2 1190 aa11.31□□□□□ -0.6
CACNA1D-230ENST00000640483 FSD1Q9BTV5 496 aa11.3□□□□□ -0.6
CACNA1D-230ENST00000640483 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.3□□□□□ -0.6
CACNA1D-230ENST00000640483 TSHZ2Q9NRE2 1034 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms