RNA–Protein interactions for RNA: ENST00000640458.1

VPS72-207, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5 BASIC

Gene VPS72, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-207ENST00000640458 DCAF11Q8TEB1 546 aa26.42■■□□□ 1.82
VPS72-207ENST00000640458 GPRASP1Q5JY77 1395 aa26.42■■□□□ 1.82
VPS72-207ENST00000640458 ANKARQ7Z5J8 1434 aa26.41■■□□□ 1.82
VPS72-207ENST00000640458 TRIM37O94972 964 aa26.41■■□□□ 1.82
VPS72-207ENST00000640458 CAMKK2Q96RR4 588 aa26.4■■□□□ 1.82
VPS72-207ENST00000640458 TNS1Q9HBL0 1735 aaKnown RBP26.39■■□□□ 1.82
VPS72-207ENST00000640458 YY1P25490 414 aa26.39■■□□□ 1.82
VPS72-207ENST00000640458 PRDM11Q9NQV5 511 aa26.39■■□□□ 1.82
VPS72-207ENST00000640458 KDM2AQ9Y2K7 1162 aa26.39■■□□□ 1.82
VPS72-207ENST00000640458 TRPM3Q9HCF6 1732 aaPredicted RBP26.39■■□□□ 1.81
VPS72-207ENST00000640458 HIRIP3Q9BW71 556 aaPredicted RBP26.38■■□□□ 1.81
VPS72-207ENST00000640458 PAK3O75914 559 aaPredicted RBP26.37■■□□□ 1.81
VPS72-207ENST00000640458 APBA3O96018 575 aa26.37■■□□□ 1.81
VPS72-207ENST00000640458 FAM196AQ6ZSG2 479 aa26.37■■□□□ 1.81
VPS72-207ENST00000640458 THSD7AQ9UPZ6 1657 aa26.37■■□□□ 1.81
VPS72-207ENST00000640458 ALS2Q96Q42 1657 aa26.36■■□□□ 1.81
VPS72-207ENST00000640458 ADGRB2O60241 1585 aa26.34■■□□□ 1.81
VPS72-207ENST00000640458 SPATA31A1Q5TZJ5 1347 aa26.34■■□□□ 1.81
VPS72-207ENST00000640458 NGDNQ8NEJ9 315 aaKnown RBP26.33■■□□□ 1.81
VPS72-207ENST00000640458 STRN4Q9NRL3 753 aa26.33■■□□□ 1.81
VPS72-207ENST00000640458 MINK1Q8N4C8 1332 aaPredicted RBP26.33■■□□□ 1.81
VPS72-207ENST00000640458 PRR36Q9H6K5 1346 aa26.32■■□□□ 1.8
VPS72-207ENST00000640458 CHRNA2Q15822 529 aa26.31■■□□□ 1.8
VPS72-207ENST00000640458 TRAK1Q9UPV9 953 aa26.31■■□□□ 1.8
VPS72-207ENST00000640458 DLC1Q96QB1 1528 aa26.3■■□□□ 1.8
VPS72-207ENST00000640458 SIN3AQ96ST3 1273 aa26.29■■□□□ 1.8
VPS72-207ENST00000640458 USP35Q9P2H5 1018 aa26.29■■□□□ 1.8
VPS72-207ENST00000640458 PARD3Q8TEW0 1356 aa26.29■■□□□ 1.8
VPS72-207ENST00000640458 KIAA0232Q92628 1395 aa26.29■■□□□ 1.8
VPS72-207ENST00000640458 NBPF8Q3BBV2 869 aa26.28■■□□□ 1.8
VPS72-207ENST00000640458 NBPF14Q5TI25 921 aa26.28■■□□□ 1.8
VPS72-207ENST00000640458 EIF3AQ14152 1382 aaKnown RBP26.28■■□□□ 1.8
VPS72-207ENST00000640458 PDE3BQ13370 1112 aa26.27■■□□□ 1.8
VPS72-207ENST00000640458 CRYBG1Q9Y4K1 1723 aa26.26■■□□□ 1.79
VPS72-207ENST00000640458 ZC3H6P61129 1189 aaKnown RBP26.26■■□□□ 1.79
VPS72-207ENST00000640458 PPP1R1BQ9UD71 204 aaPredicted RBP26.26■■□□□ 1.79
VPS72-207ENST00000640458 WASLO00401 505 aaPredicted RBP26.25■■□□□ 1.79
VPS72-207ENST00000640458 ADGRB1O14514 1584 aa26.24■■□□□ 1.79
VPS72-207ENST00000640458 TULP4Q9NRJ4 1543 aa26.24■■□□□ 1.79
VPS72-207ENST00000640458 EVA1CP58658 441 aa26.23■■□□□ 1.79
VPS72-207ENST00000640458 DCAF8L1A6NGE4 600 aa26.22■■□□□ 1.79
VPS72-207ENST00000640458 NUTM2GQ5VZR2 741 aa26.22■■□□□ 1.79
VPS72-207ENST00000640458 SPON1Q9HCB6 807 aa26.22■■□□□ 1.79
VPS72-207ENST00000640458 NEUROD1Q13562 356 aa26.21■■□□□ 1.79
VPS72-207ENST00000640458 L3MBTL2Q969R5 705 aa26.21■■□□□ 1.79
VPS72-207ENST00000640458 RREB1Q92766 1687 aa26.2■■□□□ 1.78
VPS72-207ENST00000640458 BARGINQ6ZT62 677 aa26.19■■□□□ 1.78
VPS72-207ENST00000640458 NUP188Q5SRE5 1749 aa26.19■■□□□ 1.78
VPS72-207ENST00000640458 KCNQ2O43526 872 aa26.17■■□□□ 1.78
VPS72-207ENST00000640458 SSH2Q76I76 1423 aa26.16■■□□□ 1.78
VPS72-207ENST00000640458 NUDT16Q96DE0 195 aaKnown RBP26.16■■□□□ 1.78
VPS72-207ENST00000640458 LARP1Q6PKG0 1096 aaKnown RBP26.15■■□□□ 1.78
VPS72-207ENST00000640458 TCP11L2Q8N4U5 519 aa26.14■■□□□ 1.78
VPS72-207ENST00000640458 PHRF1Q9P1Y6 1649 aaKnown RBP26.14■■□□□ 1.77
VPS72-207ENST00000640458 NINLQ9Y2I6 1382 aa26.11■■□□□ 1.77
VPS72-207ENST00000640458 PCGF6Q9BYE7 350 aa26.11■■□□□ 1.77
VPS72-207ENST00000640458 KIAA1210Q9ULL0 1709 aa26.11■■□□□ 1.77
VPS72-207ENST00000640458 ATP7BP35670 1465 aa26.11■■□□□ 1.77
VPS72-207ENST00000640458 NBPF1Q3BBV0 1214 aa26.1■■□□□ 1.77
VPS72-207ENST00000640458 CAMTA1Q9Y6Y1 1673 aa26.09■■□□□ 1.77
VPS72-207ENST00000640458 ITSN1Q15811 1721 aa26.08■■□□□ 1.76
VPS72-207ENST00000640458 ABTB2Q8N961 1025 aa26.06■■□□□ 1.76
VPS72-207ENST00000640458 THRAP3Q9Y2W1 955 aaKnown RBP26.06■■□□□ 1.76
VPS72-207ENST00000640458 ACEP12821 1306 aa26.06■■□□□ 1.76
VPS72-207ENST00000640458 CDK19Q9BWU1 502 aa26.05■■□□□ 1.76
VPS72-207ENST00000640458 C11orf95C9JLR9 678 aaPredicted RBP26.02■■□□□ 1.76
VPS72-207ENST00000640458 POLR3AO14802 1390 aaPredicted RBP26.02■■□□□ 1.76
VPS72-207ENST00000640458 NRKQ7Z2Y5 1582 aa26.02■■□□□ 1.76
VPS72-207ENST00000640458 CPDO75976 1380 aa26.01■■□□□ 1.75
VPS72-207ENST00000640458 TONSLQ96HA7 1378 aa26.01■■□□□ 1.75
VPS72-207ENST00000640458 ANO8Q9HCE9 1232 aaPredicted RBP26■■□□□ 1.75
VPS72-207ENST00000640458 CCDC61Q9Y6R9 512 aa26■■□□□ 1.75
VPS72-207ENST00000640458 LMO7Q8WWI1 1683 aa25.99■■□□□ 1.75
VPS72-207ENST00000640458 ZBTB7CA1YPR0 619 aa25.99■■□□□ 1.75
VPS72-207ENST00000640458 PLSCR1O15162 318 aa25.99■■□□□ 1.75
VPS72-207ENST00000640458 ARHGEF28Q8N1W1 1705 aaKnown RBP25.99■■□□□ 1.75
VPS72-207ENST00000640458 OVOS2A0A0G2JMS6 1433 aa25.98■■□□□ 1.75
VPS72-207ENST00000640458 OVOS2A0A0J9YW53 1432 aa25.98■■□□□ 1.75
VPS72-207ENST00000640458 OVOS2Q6IE36 1432 aa25.98■■□□□ 1.75
VPS72-207ENST00000640458 USP19O94966 1318 aa25.98■■□□□ 1.75
VPS72-207ENST00000640458 GCP02774 474 aa25.98■■□□□ 1.75
VPS72-207ENST00000640458 PARP4Q9UKK3 1724 aaKnown RBP25.97■■□□□ 1.75
VPS72-207ENST00000640458 PLEKHG3A1L390 1219 aa25.97■■□□□ 1.75
VPS72-207ENST00000640458 ZBTB7AO95365 584 aa25.97■■□□□ 1.75
VPS72-207ENST00000640458 NLRP13Q86W25 1043 aa25.97■■□□□ 1.75
VPS72-207ENST00000640458 BCL11BQ9C0K0 894 aaPredicted RBP25.97■■□□□ 1.75
VPS72-207ENST00000640458 PDGFDQ9GZP0 370 aaPredicted RBP25.97■■□□□ 1.75
VPS72-207ENST00000640458 COL5A2P05997 1499 aaPredicted RBP25.96■■□□□ 1.75
VPS72-207ENST00000640458 PTF1AQ7RTS3 328 aa25.95■■□□□ 1.74
VPS72-207ENST00000640458 ZNF784Q8NCA9 323 aaPredicted RBP25.95■■□□□ 1.74
VPS72-207ENST00000640458 CRB1P82279 1406 aa25.95■■□□□ 1.74
VPS72-207ENST00000640458 DDB1Q16531 1140 aa25.94■■□□□ 1.74
VPS72-207ENST00000640458 TRPM1Q7Z4N2 1603 aa25.94■■□□□ 1.74
VPS72-207ENST00000640458 ATF5Q9Y2D1 282 aaPredicted RBP25.93■■□□□ 1.74
VPS72-207ENST00000640458 ROCK2O75116 1388 aaKnown RBP25.93■■□□□ 1.74
VPS72-207ENST00000640458 TOPAZ1Q8N9V7 1692 aa25.93■■□□□ 1.74
VPS72-207ENST00000640458 PEAK1Q9H792 1746 aa25.92■■□□□ 1.74
VPS72-207ENST00000640458 CENPJQ9HC77 1338 aaPredicted RBP25.91■■□□□ 1.74
VPS72-207ENST00000640458 CASZ1Q86V15 1759 aa25.91■■□□□ 1.74
VPS72-207ENST00000640458 CLSPNQ9HAW4 1339 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms