RNA–Protein interactions for RNA: ENST00000640451.1

MED17-225, Transcript of mediator complex subunit 17, human

TSL 5

Gene MED17, Length 1,704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MED17-225	ENST00000640451	C1orf167	Q5SNV9	1468 aa		32.76	■■■□□ 2.84
MED17-225	ENST00000640451	FAM9B	Q8IZU0	186 aa		32.76	■■■□□ 2.83
MED17-225	ENST00000640451	MST1R	Q04912	1400 aa		32.76	■■■□□ 2.83
MED17-225	ENST00000640451	NME9	Q86XW9	330 aa		32.75	■■■□□ 2.83
MED17-225	ENST00000640451	MSH6	P52701	1360 aa		32.75	■■■□□ 2.83
MED17-225	ENST00000640451	ATF3	P18847	181 aa		32.73	■■■□□ 2.83
MED17-225	ENST00000640451	KIF1A	Q12756	1690 aa		32.73	■■■□□ 2.83
MED17-225	ENST00000640451	TNNT2	P45379	298 aa	Predicted RBP	32.72	■■■□□ 2.83
MED17-225	ENST00000640451	ESCO1	Q5FWF5	840 aa		32.72	■■■□□ 2.83
MED17-225	ENST00000640451	TTC21A	Q8NDW8	1320 aa		32.72	■■■□□ 2.83
MED17-225	ENST00000640451	CADPS2	Q86UW7	1296 aa		32.7	■■■□□ 2.83
MED17-225	ENST00000640451	SCAF1	Q9H7N4	1312 aa	Known RBP	32.69	■■■□□ 2.82
MED17-225	ENST00000640451	PIK3C2A	O00443	1686 aa		32.68	■■■□□ 2.82
MED17-225	ENST00000640451	ORAI2	Q96SN7	254 aa		32.68	■■■□□ 2.82
MED17-225	ENST00000640451	OVOS2	A0A0J9YW53	1432 aa		32.68	■■■□□ 2.82
MED17-225	ENST00000640451	OVOS2	Q6IE36	1432 aa		32.68	■■■□□ 2.82
MED17-225	ENST00000640451	ZRANB1	Q9UGI0	708 aa		32.67	■■■□□ 2.82
MED17-225	ENST00000640451	USP54	Q70EL1	1684 aa		32.65	■■■□□ 2.82
MED17-225	ENST00000640451	COG3	Q96JB2	828 aa		32.65	■■■□□ 2.82
MED17-225	ENST00000640451	MAP2	P11137	1827 aa	Known RBP	32.64	■■■□□ 2.81
MED17-225	ENST00000640451	MTHFS	P49914	203 aa		32.63	■■■□□ 2.81
MED17-225	ENST00000640451	USP31	Q70CQ4	1352 aa		32.62	■■■□□ 2.81
MED17-225	ENST00000640451	AATK	Q6ZMQ8	1374 aa		32.61	■■■□□ 2.81
MED17-225	ENST00000640451	MARF1	Q9Y4F3	1742 aa	Known RBP	32.6	■■■□□ 2.81
MED17-225	ENST00000640451	SHPRH	Q149N8	1683 aa		32.6	■■■□□ 2.81
MED17-225	ENST00000640451	INSR	P06213	1382 aa		32.6	■■■□□ 2.81
MED17-225	ENST00000640451	LTBP4	Q8N2S1	1624 aa		32.6	■■■□□ 2.81
MED17-225	ENST00000640451	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.58	■■■□□ 2.81
MED17-225	ENST00000640451	CENPB	P07199	599 aa	Predicted RBP	32.58	■■■□□ 2.81
MED17-225	ENST00000640451	PSME1	Q06323	249 aa		32.57	■■■□□ 2.8
MED17-225	ENST00000640451	SMG6	Q86US8	1419 aa	Known RBP	32.56	■■■□□ 2.8
MED17-225	ENST00000640451	HNRNPU	Q00839	825 aa	Known RBP eCLIP	32.56	■■■□□ 2.8
MED17-225	ENST00000640451	FOXO3	O43524	673 aa		32.55	■■■□□ 2.8
MED17-225	ENST00000640451	COL3A1	P02461	1466 aa	Predicted RBP	32.55	■■■□□ 2.8
MED17-225	ENST00000640451	CFAP53	Q96M91	514 aa		32.54	■■■□□ 2.8
MED17-225	ENST00000640451	POLK	Q9UBT6	870 aa		32.54	■■■□□ 2.8
MED17-225	ENST00000640451	PNPLA6	Q8IY17	1366 aa		32.53	■■■□□ 2.8
MED17-225	ENST00000640451	BLM	P54132	1417 aa	Predicted RBP	32.52	■■■□□ 2.8
MED17-225	ENST00000640451	FBLN1	P23142	703 aa		32.51	■■■□□ 2.8
MED17-225	ENST00000640451	WDR43	Q15061	677 aa	Known RBP eCLIP	32.51	■■■□□ 2.8
MED17-225	ENST00000640451	ADAMTS8	Q9UP79	889 aa		32.51	■■■□□ 2.79
MED17-225	ENST00000640451	PAK3	O75914	559 aa	Predicted RBP	32.5	■■■□□ 2.79
MED17-225	ENST00000640451	ABTB2	Q8N961	1025 aa		32.48	■■■□□ 2.79
MED17-225	ENST00000640451	NLRP6	P59044	892 aa		32.48	■■■□□ 2.79
MED17-225	ENST00000640451	CDK12	Q9NYV4	1490 aa	Predicted RBP	32.48	■■■□□ 2.79
MED17-225	ENST00000640451	KRT28	Q7Z3Y7	464 aa		32.47	■■■□□ 2.79
MED17-225	ENST00000640451	SLAIN2	Q9P270	581 aa		32.47	■■■□□ 2.79
MED17-225	ENST00000640451	ALS2	Q96Q42	1657 aa		32.46	■■■□□ 2.79
MED17-225	ENST00000640451	EMILIN1	Q9Y6C2	1016 aa		32.46	■■■□□ 2.79
MED17-225	ENST00000640451	XPC	Q01831	940 aa	Predicted RBP	32.45	■■■□□ 2.78
MED17-225	ENST00000640451	BRINP3	Q76B58	766 aa		32.45	■■■□□ 2.78
MED17-225	ENST00000640451	AEBP2	Q6ZN18	517 aa	Predicted RBP	32.44	■■■□□ 2.78
MED17-225	ENST00000640451	NPHP3	Q7Z494	1330 aa		32.44	■■■□□ 2.78
MED17-225	ENST00000640451	RRS1	Q15050	365 aa	Known RBP	32.43	■■■□□ 2.78
MED17-225	ENST00000640451	PXDN	Q92626	1479 aa		32.42	■■■□□ 2.78
MED17-225	ENST00000640451	ZBED9	Q6R2W3	1325 aa		32.42	■■■□□ 2.78
MED17-225	ENST00000640451	PEAK1	Q9H792	1746 aa		32.41	■■■□□ 2.78
MED17-225	ENST00000640451	NUTM2G	Q5VZR2	741 aa		32.41	■■■□□ 2.78
MED17-225	ENST00000640451	SBNO1	A3KN83	1393 aa		32.4	■■■□□ 2.78
MED17-225	ENST00000640451	PPM1G	O15355	546 aa	Predicted RBP	32.38	■■■□□ 2.77
MED17-225	ENST00000640451	DDX17	Q92841	729 aa	Known RBP	32.38	■■■□□ 2.77
MED17-225	ENST00000640451	NFAT5	O94916	1531 aa		32.37	■■■□□ 2.77
MED17-225	ENST00000640451	SLIT3	O75094	1523 aa		32.36	■■■□□ 2.77
MED17-225	ENST00000640451	DIAPH1	O60610	1272 aa	Known RBP	32.36	■■■□□ 2.77
MED17-225	ENST00000640451	NHSL1	Q5SYE7	1610 aa		32.35	■■■□□ 2.77
MED17-225	ENST00000640451	NUDC	Q9Y266	331 aa		32.34	■■■□□ 2.77
MED17-225	ENST00000640451	MAP3K19	Q56UN5	1328 aa		32.34	■■■□□ 2.77
MED17-225	ENST00000640451	SOX12	O15370	315 aa		32.33	■■■□□ 2.77
MED17-225	ENST00000640451	USP19	O94966	1318 aa		32.33	■■■□□ 2.77
MED17-225	ENST00000640451	TNS3	Q68CZ2	1445 aa		32.33	■■■□□ 2.77
MED17-225	ENST00000640451	LTN1	O94822	1766 aa		32.32	■■■□□ 2.76
MED17-225	ENST00000640451	KIF24	Q5T7B8	1368 aa		32.3	■■■□□ 2.76
MED17-225	ENST00000640451	PHRF1	Q9P1Y6	1649 aa	Known RBP	32.29	■■■□□ 2.76
MED17-225	ENST00000640451	SOS2	Q07890	1332 aa	Predicted RBP	32.29	■■■□□ 2.76
MED17-225	ENST00000640451	FLT4	P35916	1363 aa		32.29	■■■□□ 2.76
MED17-225	ENST00000640451	U2AF1L5	P0DN76	240 aa	Predicted RBP	32.29	■■■□□ 2.76
MED17-225	ENST00000640451	IL13	P35225	146 aa		32.29	■■■□□ 2.76
MED17-225	ENST00000640451	U2AF1	Q01081	240 aa	Known RBP eCLIP	32.29	■■■□□ 2.76
MED17-225	ENST00000640451	KCNH5	Q8NCM2	988 aa		32.29	■■■□□ 2.76
MED17-225	ENST00000640451	SPATA31A3	Q5VYP0	1347 aa		32.28	■■■□□ 2.76
MED17-225	ENST00000640451	LMOD2	Q6P5Q4	547 aa		32.27	■■■□□ 2.76
MED17-225	ENST00000640451	CCDC146	Q8IYE0	955 aa		32.27	■■■□□ 2.76
MED17-225	ENST00000640451	MED1	Q15648	1581 aa	Predicted RBP	32.27	■■■□□ 2.76
MED17-225	ENST00000640451	SENP3-EIF4A1	A0A087X0R7	540 aa		32.26	■■■□□ 2.75
MED17-225	ENST00000640451	U2SURP	O15042	1029 aa	Known RBP	32.26	■■■□□ 2.75
MED17-225	ENST00000640451	ROBO1	Q9Y6N7	1651 aa		32.26	■■■□□ 2.75
MED17-225	ENST00000640451	CRYBG1	Q9Y4K1	1723 aa		32.25	■■■□□ 2.75
MED17-225	ENST00000640451	ARHGEF10	O15013	1369 aa		32.24	■■■□□ 2.75
MED17-225	ENST00000640451	RTL1	A6NKG5	1358 aa		32.23	■■■□□ 2.75
MED17-225	ENST00000640451	GC	P02774	474 aa		32.23	■■■□□ 2.75
MED17-225	ENST00000640451	HSP90AB2P	Q58FF8	381 aa		32.23	■■■□□ 2.75
MED17-225	ENST00000640451	RGPD1	P0DJD0	1748 aa		32.22	■■■□□ 2.75
MED17-225	ENST00000640451	IQSEC2	Q5JU85	1478 aa		32.22	■■■□□ 2.75
MED17-225	ENST00000640451	RUNDC1	Q96C34	613 aa		32.22	■■■□□ 2.75
MED17-225	ENST00000640451	AMPH	P49418	695 aa		32.21	■■■□□ 2.75
MED17-225	ENST00000640451	EIF4A2	Q14240	407 aa	Known RBP	32.21	■■■□□ 2.75
MED17-225	ENST00000640451	APAF1	O14727	1248 aa		32.19	■■■□□ 2.74
MED17-225	ENST00000640451	HOXC9	P31274	260 aa		32.19	■■■□□ 2.74
MED17-225	ENST00000640451	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.18	■■■□□ 2.74
MED17-225	ENST00000640451	PLEKHF1	Q96S99	279 aa		32.17	■■■□□ 2.74

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms