RNA–Protein interactions for RNA: ENST00000640410.1

SETD1A-203, Transcript of SET domain containing 1A, humanhuman

TSL 3

Gene SETD1A, Length 718 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETD1A-203ENST00000640410 PAK3O75914 559 aaPredicted RBP23.46■■□□□ 1.35
SETD1A-203ENST00000640410 CRYBG1Q9Y4K1 1723 aa23.46■■□□□ 1.35
SETD1A-203ENST00000640410 CCDC61Q9Y6R9 512 aa23.46■■□□□ 1.35
SETD1A-203ENST00000640410 TRPM1Q7Z4N2 1603 aa23.44■■□□□ 1.34
SETD1A-203ENST00000640410 POLR3AO14802 1390 aaPredicted RBP23.44■■□□□ 1.34
SETD1A-203ENST00000640410 VPS72Q15906 364 aa23.44■■□□□ 1.34
SETD1A-203ENST00000640410 QRICH2Q9H0J4 1663 aa23.44■■□□□ 1.34
SETD1A-203ENST00000640410 ACEP12821 1306 aa23.43■■□□□ 1.34
SETD1A-203ENST00000640410 NRAPQ86VF7 1730 aa23.42■■□□□ 1.34
SETD1A-203ENST00000640410 PLEKHG3A1L390 1219 aa23.42■■□□□ 1.34
SETD1A-203ENST00000640410 EP400Q96L91 3159 aa23.42■■□□□ 1.34
SETD1A-203ENST00000640410 SRPK2P78362 688 aaKnown RBP23.41■■□□□ 1.34
SETD1A-203ENST00000640410 COL14A1Q05707 1796 aaKnown RBP23.4■■□□□ 1.34
SETD1A-203ENST00000640410 NBPF8Q3BBV2 869 aa23.4■■□□□ 1.34
SETD1A-203ENST00000640410 CABP2Q9NPB3 220 aa23.4■■□□□ 1.34
SETD1A-203ENST00000640410 CCDC9Q9Y3X0 531 aaKnown RBP23.39■■□□□ 1.33
SETD1A-203ENST00000640410 BTG4Q9NY30 223 aa23.38■■□□□ 1.33
SETD1A-203ENST00000640410 PPIP5K1Q6PFW1 1433 aa23.38■■□□□ 1.33
SETD1A-203ENST00000640410 ROCK2O75116 1388 aaKnown RBP23.38■■□□□ 1.33
SETD1A-203ENST00000640410 BRWD3Q6RI45 1802 aa23.38■■□□□ 1.33
SETD1A-203ENST00000640410 PHRF1Q9P1Y6 1649 aaKnown RBP23.37■■□□□ 1.33
SETD1A-203ENST00000640410 NUTM2GQ5VZR2 741 aa23.37■■□□□ 1.33
SETD1A-203ENST00000640410 SEPT12Q8IYM1 358 aa23.36■■□□□ 1.33
SETD1A-203ENST00000640410 PRDM11Q9NQV5 511 aa23.35■■□□□ 1.33
SETD1A-203ENST00000640410 KIAA0232Q92628 1395 aa23.34■■□□□ 1.33
SETD1A-203ENST00000640410 ONECUT3O60422 494 aaPredicted RBP23.33■■□□□ 1.33
SETD1A-203ENST00000640410 NRKQ7Z2Y5 1582 aa23.31■■□□□ 1.32
SETD1A-203ENST00000640410 ZC3H6P61129 1189 aaKnown RBP23.3■■□□□ 1.32
SETD1A-203ENST00000640410 CHRNA2Q15822 529 aa23.3■■□□□ 1.32
SETD1A-203ENST00000640410 ABTB2Q8N961 1025 aa23.3■■□□□ 1.32
SETD1A-203ENST00000640410 CABP1Q9NZU7 370 aa23.3■■□□□ 1.32
SETD1A-203ENST00000640410 EVC2Q86UK5 1308 aa23.3■■□□□ 1.32
SETD1A-203ENST00000640410 FAM98CQ17RN3 349 aaKnown RBP23.29■■□□□ 1.32
SETD1A-203ENST00000640410 USP19O94966 1318 aa23.29■■□□□ 1.32
SETD1A-203ENST00000640410 SPATA31A5Q5VU36 1347 aa23.29■■□□□ 1.32
SETD1A-203ENST00000640410 SPATA31A7Q8IWB4 1347 aa23.29■■□□□ 1.32
SETD1A-203ENST00000640410 USP6P35125 1406 aa23.27■■□□□ 1.32
SETD1A-203ENST00000640410 A0A0G2JS52 829 aa23.27■■□□□ 1.32
SETD1A-203ENST00000640410 MYT1Q01538 1121 aa23.27■■□□□ 1.32
SETD1A-203ENST00000640410 CCDC125Q86Z20 511 aa23.27■■□□□ 1.32
SETD1A-203ENST00000640410 KRT27Q7Z3Y8 459 aa23.26■■□□□ 1.31
SETD1A-203ENST00000640410 BRD4O60885 1362 aaPredicted RBP23.26■■□□□ 1.31
SETD1A-203ENST00000640410 TONSLQ96HA7 1378 aa23.26■■□□□ 1.31
SETD1A-203ENST00000640410 BLMP54132 1417 aaPredicted RBP23.25■■□□□ 1.31
SETD1A-203ENST00000640410 SSH2Q76I76 1423 aa23.24■■□□□ 1.31
SETD1A-203ENST00000640410 NLRP13Q86W25 1043 aa23.23■■□□□ 1.31
SETD1A-203ENST00000640410 STRN4Q9NRL3 753 aa23.23■■□□□ 1.31
SETD1A-203ENST00000640410 CPDO75976 1380 aa23.23■■□□□ 1.31
SETD1A-203ENST00000640410 THSD7AQ9UPZ6 1657 aa23.22■■□□□ 1.31
SETD1A-203ENST00000640410 CARD11Q9BXL7 1154 aa23.22■■□□□ 1.31
SETD1A-203ENST00000640410 SPATA31A1Q5TZJ5 1347 aa23.21■■□□□ 1.31
SETD1A-203ENST00000640410 LMO7Q8WWI1 1683 aa23.21■■□□□ 1.31
SETD1A-203ENST00000640410 CAMTA1Q9Y6Y1 1673 aa23.21■■□□□ 1.31
SETD1A-203ENST00000640410 SBNO2Q9Y2G9 1366 aa23.2■■□□□ 1.3
SETD1A-203ENST00000640410 GCP02774 474 aa23.2■■□□□ 1.3
SETD1A-203ENST00000640410 PIK3C2AO00443 1686 aa23.19■■□□□ 1.3
SETD1A-203ENST00000640410 SLIT3O75094 1523 aa23.18■■□□□ 1.3
SETD1A-203ENST00000640410 NLRP6P59044 892 aa23.18■■□□□ 1.3
SETD1A-203ENST00000640410 DEFB132Q7Z7B7 95 aa23.18■■□□□ 1.3
SETD1A-203ENST00000640410 AKAP12Q02952 1782 aa23.18■■□□□ 1.3
SETD1A-203ENST00000640410 TTC21BQ7Z4L5 1316 aa23.15■■□□□ 1.3
SETD1A-203ENST00000640410 EVA1CP58658 441 aa23.15■■□□□ 1.3
SETD1A-203ENST00000640410 LARP1Q6PKG0 1096 aaKnown RBP23.15■■□□□ 1.3
SETD1A-203ENST00000640410 CPSF1Q10570 1443 aaKnown RBP23.15■■□□□ 1.3
SETD1A-203ENST00000640410 SF3B2Q13435 895 aaKnown RBP23.14■■□□□ 1.29
SETD1A-203ENST00000640410 FAM182BQ5T319 152 aa23.14■■□□□ 1.29
SETD1A-203ENST00000640410 ZNF692Q9BU19 519 aaPredicted RBP23.14■■□□□ 1.29
SETD1A-203ENST00000640410 USP35Q9P2H5 1018 aa23.14■■□□□ 1.29
SETD1A-203ENST00000640410 COL5A2P05997 1499 aaPredicted RBP23.13■■□□□ 1.29
SETD1A-203ENST00000640410 CCER1Q8TC90 406 aaPredicted RBP23.13■■□□□ 1.29
SETD1A-203ENST00000640410 ZBTB7CA1YPR0 619 aa23.12■■□□□ 1.29
SETD1A-203ENST00000640410 ZEB1P37275 1124 aaPredicted RBP23.12■■□□□ 1.29
SETD1A-203ENST00000640410 ZRANB1Q9UGI0 708 aa23.12■■□□□ 1.29
SETD1A-203ENST00000640410 MON2Q7Z3U7 1717 aa23.11■■□□□ 1.29
SETD1A-203ENST00000640410 BARGINQ6ZT62 677 aa23.1■■□□□ 1.29
SETD1A-203ENST00000640410 KTN1Q86UP2 1357 aaKnown RBP23.1■■□□□ 1.29
SETD1A-203ENST00000640410 TTC21AQ8NDW8 1320 aa23.09■■□□□ 1.29
SETD1A-203ENST00000640410 SRCAPQ6ZRS2 3230 aa23.09■■□□□ 1.29
SETD1A-203ENST00000640410 TCP11L2Q8N4U5 519 aa23.09■■□□□ 1.29
SETD1A-203ENST00000640410 AATKQ6ZMQ8 1374 aa23.09■■□□□ 1.29
SETD1A-203ENST00000640410 CD163L1Q9NR16 1453 aa23.08■■□□□ 1.29
SETD1A-203ENST00000640410 COL18A1P39060 1754 aa23.08■■□□□ 1.29
SETD1A-203ENST00000640410 RGPD1P0DJD0 1748 aa23.06■■□□□ 1.28
SETD1A-203ENST00000640410 BAG6P46379 1132 aa23.06■■□□□ 1.28
SETD1A-203ENST00000640410 SOX12O15370 315 aa23.05■■□□□ 1.28
SETD1A-203ENST00000640410 TMC1Q8TDI8 760 aa23.05■■□□□ 1.28
SETD1A-203ENST00000640410 CRB1P82279 1406 aa23.05■■□□□ 1.28
SETD1A-203ENST00000640410 NFAT5O94916 1531 aa23.04■■□□□ 1.28
SETD1A-203ENST00000640410 ARHGEF25Q86VW2 580 aa23.04■■□□□ 1.28
SETD1A-203ENST00000640410 SLC12A5Q9H2X9 1139 aa23.04■■□□□ 1.28
SETD1A-203ENST00000640410 THRAP3Q9Y2W1 955 aaKnown RBP23.04■■□□□ 1.28
SETD1A-203ENST00000640410 TNS1Q9HBL0 1735 aaKnown RBP23.04■■□□□ 1.28
SETD1A-203ENST00000640410 KCNH5Q8NCM2 988 aa23.03■■□□□ 1.28
SETD1A-203ENST00000640410 TESK2Q96S53 571 aa23.03■■□□□ 1.28
SETD1A-203ENST00000640410 AXIN2Q9Y2T1 843 aa23.03■■□□□ 1.28
SETD1A-203ENST00000640410 ST20-MTHFSA0A0A6YYL1 179 aa23.02■■□□□ 1.28
SETD1A-203ENST00000640410 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.02■■□□□ 1.28
SETD1A-203ENST00000640410 USP31Q70CQ4 1352 aa23.01■■□□□ 1.27
SETD1A-203ENST00000640410 EN1Q05925 392 aaPredicted RBP23.01■■□□□ 1.27
SETD1A-203ENST00000640410 PDE3BQ13370 1112 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms