RNA–Protein interactions for RNA: ENST00000640028.1

CACNA1H-212, Transcript of calcium voltage-gated channel subunit alpha1 H, humanhuman

TSL 5

Gene CACNA1H, Length 7,375 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1H-212ENST00000640028 GOLGA6L10A0A0M3HER8 536 aa23.62■■□□□ 1.37
CACNA1H-212ENST00000640028 DEF6Q9H4E7 631 aa23.62■■□□□ 1.37
CACNA1H-212ENST00000640028 TSPYL4Q9UJ04 414 aa23.61■■□□□ 1.37
CACNA1H-212ENST00000640028 PPM1FP49593 454 aaPredicted RBP23.61■■□□□ 1.37
CACNA1H-212ENST00000640028 FILIP1LQ4L180 1135 aa23.61■■□□□ 1.37
CACNA1H-212ENST00000640028 WASHC2CQ9Y4E1 1318 aa23.6■■□□□ 1.37
CACNA1H-212ENST00000640028 PHLDB1Q86UU1 1377 aa23.6■■□□□ 1.37
CACNA1H-212ENST00000640028 IPO4Q8TEX9 1081 aaKnown RBP23.6■■□□□ 1.37
CACNA1H-212ENST00000640028 PIBF1Q8WXW3 757 aa23.59■■□□□ 1.37
CACNA1H-212ENST00000640028 SRRTQ9BXP5 876 aaKnown RBP23.59■■□□□ 1.37
CACNA1H-212ENST00000640028 ZBTB9Q96C00 473 aa23.59■■□□□ 1.37
CACNA1H-212ENST00000640028 CCDC112Q8NEF3 446 aa23.59■■□□□ 1.37
CACNA1H-212ENST00000640028 FSD1Q9BTV5 496 aa23.59■■□□□ 1.37
CACNA1H-212ENST00000640028 ERLIN2O94905 339 aa23.58■■□□□ 1.36
CACNA1H-212ENST00000640028 TNNT1P13805 278 aa23.57■■□□□ 1.36
CACNA1H-212ENST00000640028 GRPEL1Q9HAV7 217 aa23.57■■□□□ 1.36
CACNA1H-212ENST00000640028 SSR1P43307 286 aaKnown RBP23.57■■□□□ 1.36
CACNA1H-212ENST00000640028 XBP1P17861 261 aa23.57■■□□□ 1.36
CACNA1H-212ENST00000640028 NF2P35240 595 aa23.57■■□□□ 1.36
CACNA1H-212ENST00000640028 CDCA7LQ96GN5 454 aa23.57■■□□□ 1.36
CACNA1H-212ENST00000640028 DDX58O95786 925 aaKnown RBP23.56■■□□□ 1.36
CACNA1H-212ENST00000640028 ZHX1Q9UKY1 873 aaPredicted RBP23.56■■□□□ 1.36
CACNA1H-212ENST00000640028 CDC45O75419 566 aa23.56■■□□□ 1.36
CACNA1H-212ENST00000640028 TNMDQ9H2S6 317 aa23.56■■□□□ 1.36
CACNA1H-212ENST00000640028 ERC2O15083 957 aa23.55■■□□□ 1.36
CACNA1H-212ENST00000640028 FILIP1Q7Z7B0 1213 aa23.54■■□□□ 1.36
CACNA1H-212ENST00000640028 LRRCC1Q9C099 1032 aa23.54■■□□□ 1.36
CACNA1H-212ENST00000640028 CNTROBQ8N137 903 aa23.54■■□□□ 1.36
CACNA1H-212ENST00000640028 POLR3GO15318 223 aaPredicted RBP23.54■■□□□ 1.36
CACNA1H-212ENST00000640028 CCDC113Q9H0I3 377 aa23.54■■□□□ 1.36
CACNA1H-212ENST00000640028 DIAPH1O60610 1272 aaKnown RBP23.53■■□□□ 1.36
CACNA1H-212ENST00000640028 MATR3P43243 847 aaKnown RBP eCLIP23.53■■□□□ 1.36
CACNA1H-212ENST00000640028 PSME1Q06323 249 aa23.53■■□□□ 1.36
CACNA1H-212ENST00000640028 PPFIBP1Q86W92 1011 aa23.53■■□□□ 1.36
CACNA1H-212ENST00000640028 ME1P48163 572 aa23.53■■□□□ 1.36
CACNA1H-212ENST00000640028 ABCC8Q09428 1581 aa23.53■■□□□ 1.36
CACNA1H-212ENST00000640028 STK38Q15208 465 aa23.53■■□□□ 1.36
CACNA1H-212ENST00000640028 TTC16Q8NEE8 873 aa23.52■■□□□ 1.36
CACNA1H-212ENST00000640028 CAMK4Q16566 473 aa23.52■■□□□ 1.36
CACNA1H-212ENST00000640028 PSMD1Q99460 953 aa23.52■■□□□ 1.36
CACNA1H-212ENST00000640028 GIMAP7Q8NHV1 300 aa23.52■■□□□ 1.36
CACNA1H-212ENST00000640028 CARMIL1Q5VZK9 1371 aa23.51■■□□□ 1.35
CACNA1H-212ENST00000640028 LETM1O95202 739 aaPredicted RBP23.51■■□□□ 1.35
CACNA1H-212ENST00000640028 CHMP4BP1P59074 171 aa23.51■■□□□ 1.35
CACNA1H-212ENST00000640028 ZNHIT6Q9NWK9 470 aaKnown RBP23.51■■□□□ 1.35
CACNA1H-212ENST00000640028 SERPINA10Q9UK55 444 aa23.5■■□□□ 1.35
CACNA1H-212ENST00000640028 HMGN5P82970 282 aaKnown RBP23.5■■□□□ 1.35
CACNA1H-212ENST00000640028 CUX2O14529 1486 aa23.5■■□□□ 1.35
CACNA1H-212ENST00000640028 SSBP05455 408 aaKnown RBP eCLIP23.5■■□□□ 1.35
CACNA1H-212ENST00000640028 UBTFL1P0CB47 393 aaPredicted RBP23.5■■□□□ 1.35
CACNA1H-212ENST00000640028 DNA2P51530 1060 aa23.5■■□□□ 1.35
CACNA1H-212ENST00000640028 BCCIPQ9P287 314 aaKnown RBP eCLIP23.49■■□□□ 1.35
CACNA1H-212ENST00000640028 GOLGA6L7A0A1B0GV03 622 aa23.49■■□□□ 1.35
CACNA1H-212ENST00000640028 PSMA5P28066 241 aa23.49■■□□□ 1.35
CACNA1H-212ENST00000640028 PUS7Q96PZ0 661 aaKnown RBP23.49■■□□□ 1.35
CACNA1H-212ENST00000640028 SIL1Q9H173 461 aa23.49■■□□□ 1.35
CACNA1H-212ENST00000640028 PDZRN3Q9UPQ7 1066 aa23.49■■□□□ 1.35
CACNA1H-212ENST00000640028 SPDYE4A6NLX3 237 aa23.49■■□□□ 1.35
CACNA1H-212ENST00000640028 API5Q9BZZ5 524 aaKnown RBP23.49■■□□□ 1.35
CACNA1H-212ENST00000640028 CGNQ9P2M7 1197 aaKnown RBP23.48■■□□□ 1.35
CACNA1H-212ENST00000640028 SURF6O75683 361 aaKnown RBP23.48■■□□□ 1.35
CACNA1H-212ENST00000640028 NINLQ9Y2I6 1382 aa23.48■■□□□ 1.35
CACNA1H-212ENST00000640028 USP47Q96K76 1375 aa23.48■■□□□ 1.35
CACNA1H-212ENST00000640028 GBP2P32456 591 aaPredicted RBP23.48■■□□□ 1.35
CACNA1H-212ENST00000640028 TXLNAP40222 546 aa23.48■■□□□ 1.35
CACNA1H-212ENST00000640028 ANKRD30AQ9BXX3 1397 aa23.48■■□□□ 1.35
CACNA1H-212ENST00000640028 PDCL2Q8N4E4 241 aa23.47■■□□□ 1.35
CACNA1H-212ENST00000640028 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.47■■□□□ 1.357e-6■■■■□ 21.9
CACNA1H-212ENST00000640028 CCDC192P0DO97 292 aa23.46■■□□□ 1.35
CACNA1H-212ENST00000640028 NEBLO76041 1014 aa23.46■■□□□ 1.35
CACNA1H-212ENST00000640028 ANKRD18AQ8IVF6 992 aa23.46■■□□□ 1.35
CACNA1H-212ENST00000640028 FMN1Q68DA7 1419 aa23.46■■□□□ 1.35
CACNA1H-212ENST00000640028 SPINK5Q9NQ38 1064 aaPredicted RBP23.46■■□□□ 1.35
CACNA1H-212ENST00000640028 EZRP15311 586 aaKnown RBP23.46■■□□□ 1.35
CACNA1H-212ENST00000640028 CFAP45Q9UL16 551 aa23.45■■□□□ 1.35
CACNA1H-212ENST00000640028 NUP133Q8WUM0 1156 aa23.45■■□□□ 1.34
CACNA1H-212ENST00000640028 ROCK1Q13464 1354 aa23.44■■□□□ 1.34
CACNA1H-212ENST00000640028 RUNDC1Q96C34 613 aa23.44■■□□□ 1.34
CACNA1H-212ENST00000640028 CCP110O43303 1012 aa23.44■■□□□ 1.34
CACNA1H-212ENST00000640028 EIF3JO75822 258 aaKnown RBP23.44■■□□□ 1.34
CACNA1H-212ENST00000640028 SART3Q15020 963 aaKnown RBP23.43■■□□□ 1.34
CACNA1H-212ENST00000640028 SYCE3A1L190 88 aa23.43■■□□□ 1.34
CACNA1H-212ENST00000640028 MBD3O95983 291 aa23.43■■□□□ 1.34
CACNA1H-212ENST00000640028 KIAA1328Q86T90 577 aa23.42■■□□□ 1.34
CACNA1H-212ENST00000640028 VPS8Q8N3P4 1428 aa23.41■■□□□ 1.34
CACNA1H-212ENST00000640028 RNF187Q5TA31 235 aaPredicted RBP23.41■■□□□ 1.34
CACNA1H-212ENST00000640028 RSPH4AQ5TD94 716 aa23.41■■□□□ 1.34
CACNA1H-212ENST00000640028 MAP2K1Q02750 393 aaPredicted RBP23.41■■□□□ 1.34
CACNA1H-212ENST00000640028 EVC2Q86UK5 1308 aa23.41■■□□□ 1.34
CACNA1H-212ENST00000640028 GOPCQ9HD26 462 aa23.41■■□□□ 1.34
CACNA1H-212ENST00000640028 TMCO3Q6UWJ1 677 aa23.41■■□□□ 1.34
CACNA1H-212ENST00000640028 BCAR3O75815 825 aa23.4■■□□□ 1.34
CACNA1H-212ENST00000640028 UBE4AQ14139 1066 aa23.4■■□□□ 1.34
CACNA1H-212ENST00000640028 ZNF396Q96N95 335 aaPredicted RBP23.4■■□□□ 1.34
CACNA1H-212ENST00000640028 HSP90AB4PQ58FF6 505 aa23.4■■□□□ 1.34
CACNA1H-212ENST00000640028 GGNBP2Q9H3C7 697 aa23.4■■□□□ 1.34
CACNA1H-212ENST00000640028 RBM5P52756 815 aaKnown RBP eCLIP23.4■■□□□ 1.34
CACNA1H-212ENST00000640028 SKAP1Q86WV1 359 aa23.4■■□□□ 1.34
CACNA1H-212ENST00000640028 AKNAQ7Z591 1439 aa23.4■■□□□ 1.34
CACNA1H-212ENST00000640028 WDR70Q9NW82 654 aa23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms