RNA–Protein interactions for RNA: ENST00000639955.1

NECAP1-221, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NECAP1, Length 3,479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-221ENST00000639955 ASXL2Q76L83 1435 aa9.67□□□□□ -0.86
NECAP1-221ENST00000639955 POLR3AO14802 1390 aaPredicted RBP9.67□□□□□ -0.86
NECAP1-221ENST00000639955 TXNDC2Q86VQ3 553 aa9.67□□□□□ -0.86
NECAP1-221ENST00000639955 WDR63Q8IWG1 891 aa9.67□□□□□ -0.86
NECAP1-221ENST00000639955 DDX19BQ9UMR2 479 aa9.67□□□□□ -0.86
NECAP1-221ENST00000639955 TRPM2O94759 1503 aa9.67□□□□□ -0.86
NECAP1-221ENST00000639955 ZFYVE16Q7Z3T8 1539 aa9.67□□□□□ -0.86
NECAP1-221ENST00000639955 RSPH6AQ9H0K4 717 aa9.66□□□□□ -0.86
NECAP1-221ENST00000639955 ABCA6Q8N139 1617 aa9.66□□□□□ -0.86
NECAP1-221ENST00000639955 GOLGA6L3A6NEY3 463 aa9.66□□□□□ -0.86
NECAP1-221ENST00000639955 C14orf37Q86TY3 774 aa9.66□□□□□ -0.86
NECAP1-221ENST00000639955 NPATQ14207 1427 aa9.66□□□□□ -0.86
NECAP1-221ENST00000639955 SPHKAPQ2M3C7 1700 aa9.66□□□□□ -0.86
NECAP1-221ENST00000639955 PLXNC1O60486 1568 aa9.66□□□□□ -0.86
NECAP1-221ENST00000639955 SMARCA5O60264 1052 aaPredicted RBP9.65□□□□□ -0.86
NECAP1-221ENST00000639955 ARID3AQ99856 593 aa9.65□□□□□ -0.86
NECAP1-221ENST00000639955 TRAK2O60296 914 aa9.65□□□□□ -0.86
NECAP1-221ENST00000639955 DTNBO60941 627 aa9.65□□□□□ -0.86
NECAP1-221ENST00000639955 HSP90AA2PQ14568 343 aaPredicted RBP9.65□□□□□ -0.86
NECAP1-221ENST00000639955 NUTM2GQ5VZR2 741 aa9.65□□□□□ -0.86
NECAP1-221ENST00000639955 TSHZ3Q63HK5 1081 aa9.65□□□□□ -0.86
NECAP1-221ENST00000639955 FGD1P98174 961 aa9.65□□□□□ -0.87
NECAP1-221ENST00000639955 C16orf71Q8IYS4 520 aaPredicted RBP9.65□□□□□ -0.87
NECAP1-221ENST00000639955 CHAMP1Q96JM3 812 aa9.65□□□□□ -0.87
NECAP1-221ENST00000639955 DNAJC5Q9H3Z4 198 aa9.65□□□□□ -0.87
NECAP1-221ENST00000639955 MCM4P33991 863 aa9.64□□□□□ -0.87
NECAP1-221ENST00000639955 LTV1Q96GA3 475 aaPredicted RBP9.64□□□□□ -0.87
NECAP1-221ENST00000639955 IQGAP1P46940 1657 aa9.64□□□□□ -0.87
NECAP1-221ENST00000639955 IPO8O15397 1037 aaKnown RBP9.64□□□□□ -0.87
NECAP1-221ENST00000639955 CD109Q6YHK3 1445 aa9.64□□□□□ -0.87
NECAP1-221ENST00000639955 MCM10Q7L590 875 aa9.63□□□□□ -0.87
NECAP1-221ENST00000639955 AEBP1Q8IUX7 1158 aa9.63□□□□□ -0.87
NECAP1-221ENST00000639955 ESF1Q9H501 851 aaKnown RBP9.63□□□□□ -0.87
NECAP1-221ENST00000639955 RRAGDQ9NQL2 400 aaPredicted RBP9.63□□□□□ -0.87
NECAP1-221ENST00000639955 MYOM1P52179 1685 aa9.63□□□□□ -0.87
NECAP1-221ENST00000639955 CD2BP2O95400 341 aaKnown RBP9.63□□□□□ -0.87
NECAP1-221ENST00000639955 OTUD7AQ8TE49 926 aaPredicted RBP9.63□□□□□ -0.87
NECAP1-221ENST00000639955 CHD1LQ86WJ1 897 aa9.62□□□□□ -0.87
NECAP1-221ENST00000639955 RNF17Q9BXT8 1623 aaKnown RBP9.62□□□□□ -0.87
NECAP1-221ENST00000639955 XRCC6P12956 609 aaKnown RBP eCLIP9.62□□□□□ -0.87
NECAP1-221ENST00000639955 TWISTNBQ3B726 338 aaPredicted RBP9.62□□□□□ -0.87
NECAP1-221ENST00000639955 C8orf58Q8NAV2 365 aa9.62□□□□□ -0.87
NECAP1-221ENST00000639955 STAC3Q96MF2 364 aa9.62□□□□□ -0.87
NECAP1-221ENST00000639955 CEP152O94986 1710 aa9.62□□□□□ -0.87
NECAP1-221ENST00000639955 CHMP5Q9NZZ3 219 aa9.62□□□□□ -0.87
NECAP1-221ENST00000639955 AAMPQ13685 434 aa9.61□□□□□ -0.87
NECAP1-221ENST00000639955 MPNDQ8N594 471 aa9.61□□□□□ -0.87
NECAP1-221ENST00000639955 MAP3K4Q9Y6R4 1608 aa9.61□□□□□ -0.87
NECAP1-221ENST00000639955 ANKRD36BQ8N2N9 1353 aa9.61□□□□□ -0.87
NECAP1-221ENST00000639955 F6X3S4 739 aa9.61□□□□□ -0.87
NECAP1-221ENST00000639955 SULT6B1Q6IMI4 303 aa9.61□□□□□ -0.87
NECAP1-221ENST00000639955 MBIPQ9NS73 344 aa9.61□□□□□ -0.87
NECAP1-221ENST00000639955 MROH2AA6NES4 1674 aa9.6□□□□□ -0.87
NECAP1-221ENST00000639955 NPC1L1Q9UHC9 1359 aa9.6□□□□□ -0.87
NECAP1-221ENST00000639955 SSFA2P28290 1259 aa9.6□□□□□ -0.87
NECAP1-221ENST00000639955 POLKQ9UBT6 870 aa9.6□□□□□ -0.87
NECAP1-221ENST00000639955 TRIM44Q96DX7 344 aaPredicted RBP9.6□□□□□ -0.87
NECAP1-221ENST00000639955 ANTXR1Q9H6X2 564 aa9.6□□□□□ -0.87
NECAP1-221ENST00000639955 KIF1BO60333 1816 aa9.6□□□□□ -0.87
NECAP1-221ENST00000639955 KIF16BQ96L93 1317 aa9.6□□□□□ -0.87
NECAP1-221ENST00000639955 RBM33Q96EV2 1170 aaKnown RBP9.59□□□□□ -0.87
NECAP1-221ENST00000639955 ZBTB40Q9NUA8 1239 aa9.59□□□□□ -0.87
NECAP1-221ENST00000639955 L1TD1Q5T7N2 865 aaKnown RBP9.59□□□□□ -0.87
NECAP1-221ENST00000639955 TBC1D9Q6ZT07 1266 aa9.59□□□□□ -0.87
NECAP1-221ENST00000639955 TNPO1Q92973 898 aaKnown RBP9.59□□□□□ -0.87
NECAP1-221ENST00000639955 PLEKHF1Q96S99 279 aa9.59□□□□□ -0.87
NECAP1-221ENST00000639955 ZNF518AQ6AHZ1 1483 aa9.59□□□□□ -0.87
NECAP1-221ENST00000639955 RTEL1-TNFRSF6BF6WH68 1400 aa9.59□□□□□ -0.87
NECAP1-221ENST00000639955 OSCARQ8IYS5 282 aa9.59□□□□□ -0.87
NECAP1-221ENST00000639955 TET3O43151 1660 aa9.59□□□□□ -0.88
NECAP1-221ENST00000639955 FAM69CQ0P6D2 419 aa9.58□□□□□ -0.88
NECAP1-221ENST00000639955 KLHL34Q8N239 644 aa9.58□□□□□ -0.88
NECAP1-221ENST00000639955 NGEFQ8N5V2 710 aa9.58□□□□□ -0.88
NECAP1-221ENST00000639955 LAMC1P11047 1609 aa9.58□□□□□ -0.88
NECAP1-221ENST00000639955 COG3Q96JB2 828 aa9.58□□□□□ -0.88
NECAP1-221ENST00000639955 PPRC1Q5VV67 1664 aaKnown RBP9.58□□□□□ -0.88
NECAP1-221ENST00000639955 FOXO3O43524 673 aa9.58□□□□□ -0.88
NECAP1-221ENST00000639955 PNNQ9H307 717 aaKnown RBP9.58□□□□□ -0.88
NECAP1-221ENST00000639955 MCTP1Q6DN14 999 aa9.57□□□□□ -0.88
NECAP1-221ENST00000639955 PAXIP1Q6ZW49 1069 aaPredicted RBP9.57□□□□□ -0.88
NECAP1-221ENST00000639955 SLC26A8Q96RN1 970 aa9.57□□□□□ -0.88
NECAP1-221ENST00000639955 DDX49Q9Y6V7 483 aaKnown RBP9.57□□□□□ -0.88
NECAP1-221ENST00000639955 GAS2L2Q8NHY3 880 aa9.57□□□□□ -0.88
NECAP1-221ENST00000639955 NINLQ9Y2I6 1382 aa9.57□□□□□ -0.88
NECAP1-221ENST00000639955 YEATS2Q9ULM3 1422 aa9.57□□□□□ -0.88
NECAP1-221ENST00000639955 LARP6Q9BRS8 491 aaKnown RBP9.57□□□□□ -0.88
NECAP1-221ENST00000639955 QRICH2Q9H0J4 1663 aa9.56□□□□□ -0.88
NECAP1-221ENST00000639955 VAMP4O75379 141 aa9.56□□□□□ -0.88
NECAP1-221ENST00000639955 MAP4K4O95819 1239 aaPredicted RBP9.56□□□□□ -0.88
NECAP1-221ENST00000639955 NFE2L2Q16236 605 aa9.56□□□□□ -0.88
NECAP1-221ENST00000639955 EXOC6BQ9Y2D4 811 aa9.56□□□□□ -0.88
NECAP1-221ENST00000639955 NUCB1Q02818 461 aa9.56□□□□□ -0.88
NECAP1-221ENST00000639955 PKP1Q13835 747 aa9.56□□□□□ -0.88
NECAP1-221ENST00000639955 SMC5Q8IY18 1101 aa9.56□□□□□ -0.88
NECAP1-221ENST00000639955 RILPL2Q969X0 211 aa9.56□□□□□ -0.88
NECAP1-221ENST00000639955 EFCAB6Q5THR3 1501 aa9.56□□□□□ -0.88
NECAP1-221ENST00000639955 TRIM6-TRIM34B2RNG4 842 aa9.55□□□□□ -0.88
NECAP1-221ENST00000639955 CCDC27Q2M243 656 aa9.55□□□□□ -0.88
NECAP1-221ENST00000639955 HSP90AB2PQ58FF8 381 aa9.55□□□□□ -0.88
NECAP1-221ENST00000639955 PHF23Q9BUL5 403 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms