RNA–Protein interactions for RNA: ENST00000639941.1

SHISA9-205, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHISA9, Length 1,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-205ENST00000639941 SLIT2O94813 1529 aa32.15■■■□□ 2.74
SHISA9-205ENST00000639941 RGS12O14924 1447 aa32.13■■■□□ 2.73
SHISA9-205ENST00000639941 RBM6P78332 1123 aaKnown RBP32.13■■■□□ 2.73
SHISA9-205ENST00000639941 PAK3O75914 559 aaPredicted RBP32.12■■■□□ 2.73
SHISA9-205ENST00000639941 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.12■■■□□ 2.73
SHISA9-205ENST00000639941 EVC2Q86UK5 1308 aa32.11■■■□□ 2.73
SHISA9-205ENST00000639941 HAP1P54257 671 aaPredicted RBP32.11■■■□□ 2.73
SHISA9-205ENST00000639941 TRPC5Q9UL62 973 aaPredicted RBP32.11■■■□□ 2.73
SHISA9-205ENST00000639941 PLCH1Q4KWH8 1693 aa32.1■■■□□ 2.73
SHISA9-205ENST00000639941 CABP1Q9NZU7 370 aa32.07■■■□□ 2.72
SHISA9-205ENST00000639941 SBNO2Q9Y2G9 1366 aa32.06■■■□□ 2.72
SHISA9-205ENST00000639941 PHRF1Q9P1Y6 1649 aaKnown RBP32.04■■■□□ 2.72
SHISA9-205ENST00000639941 NWD2Q9ULI1 1742 aa32.04■■■□□ 2.72
SHISA9-205ENST00000639941 FAM83GA6ND36 823 aa32.04■■■□□ 2.72
SHISA9-205ENST00000639941 UNC5CLQ8IV45 518 aa32.04■■■□□ 2.72
SHISA9-205ENST00000639941 NUTM2GQ5VZR2 741 aa32.02■■■□□ 2.72
SHISA9-205ENST00000639941 GLI3P10071 1580 aa32■■■□□ 2.71
SHISA9-205ENST00000639941 NRAPQ86VF7 1730 aa32■■■□□ 2.71
SHISA9-205ENST00000639941 USP6P35125 1406 aa32■■■□□ 2.71
SHISA9-205ENST00000639941 CLSPNQ9HAW4 1339 aa32■■■□□ 2.71
SHISA9-205ENST00000639941 GJD4Q96KN9 370 aaPredicted RBP31.98■■■□□ 2.71
SHISA9-205ENST00000639941 COL14A1Q05707 1796 aaKnown RBP31.98■■■□□ 2.71
SHISA9-205ENST00000639941 AKAP12Q02952 1782 aa31.96■■■□□ 2.71
SHISA9-205ENST00000639941 SSH2Q76I76 1423 aa31.96■■■□□ 2.71
SHISA9-205ENST00000639941 ATAD2Q6PL18 1390 aa31.95■■■□□ 2.71
SHISA9-205ENST00000639941 NRKQ7Z2Y5 1582 aa31.95■■■□□ 2.71
SHISA9-205ENST00000639941 ABTB2Q8N961 1025 aa31.95■■■□□ 2.71
SHISA9-205ENST00000639941 USP19O94966 1318 aa31.93■■■□□ 2.7
SHISA9-205ENST00000639941 BRD4O60885 1362 aaPredicted RBP31.93■■■□□ 2.7
SHISA9-205ENST00000639941 KIAA0232Q92628 1395 aa31.92■■■□□ 2.7
SHISA9-205ENST00000639941 VPS72Q15906 364 aa31.91■■■□□ 2.7
SHISA9-205ENST00000639941 UPF1Q92900 1129 aaKnown RBP eCLIP31.91■■■□□ 2.7
SHISA9-205ENST00000639941 TESK2Q96S53 571 aa31.91■■■□□ 2.7
SHISA9-205ENST00000639941 BTG4Q9NY30 223 aa31.91■■■□□ 2.7
SHISA9-205ENST00000639941 PIK3C2AO00443 1686 aa31.91■■■□□ 2.7
SHISA9-205ENST00000639941 CPSF1Q10570 1443 aaKnown RBP31.91■■■□□ 2.7
SHISA9-205ENST00000639941 ST20-MTHFSA0A0A6YYL1 179 aa31.9■■■□□ 2.7
SHISA9-205ENST00000639941 EP400Q96L91 3159 aa31.89■■■□□ 2.69
SHISA9-205ENST00000639941 PRDM11Q9NQV5 511 aa31.88■■■□□ 2.69
SHISA9-205ENST00000639941 CD163L1Q9NR16 1453 aa31.87■■■□□ 2.69
SHISA9-205ENST00000639941 ZC3H6P61129 1189 aaKnown RBP31.87■■■□□ 2.69
SHISA9-205ENST00000639941 TIMELESSQ9UNS1 1208 aa31.87■■■□□ 2.69
SHISA9-205ENST00000639941 CHRNA2Q15822 529 aa31.86■■■□□ 2.69
SHISA9-205ENST00000639941 MON2Q7Z3U7 1717 aa31.86■■■□□ 2.69
SHISA9-205ENST00000639941 NLRP13Q86W25 1043 aa31.84■■■□□ 2.69
SHISA9-205ENST00000639941 USP47Q96K76 1375 aa31.83■■■□□ 2.69
SHISA9-205ENST00000639941 TTC21BQ7Z4L5 1316 aa31.83■■■□□ 2.69
SHISA9-205ENST00000639941 ZNF692Q9BU19 519 aaPredicted RBP31.83■■■□□ 2.69
SHISA9-205ENST00000639941 SLIT3O75094 1523 aa31.83■■■□□ 2.69
SHISA9-205ENST00000639941 CCER1Q8TC90 406 aaPredicted RBP31.82■■■□□ 2.68
SHISA9-205ENST00000639941 BRWD3Q6RI45 1802 aa31.82■■■□□ 2.68
SHISA9-205ENST00000639941 GCP02774 474 aa31.81■■■□□ 2.68
SHISA9-205ENST00000639941 CCDC9Q9Y3X0 531 aaKnown RBP31.81■■■□□ 2.68
SHISA9-205ENST00000639941 CPDO75976 1380 aa31.81■■■□□ 2.68
SHISA9-205ENST00000639941 KTN1Q86UP2 1357 aaKnown RBP31.81■■■□□ 2.68
SHISA9-205ENST00000639941 LMO7Q8WWI1 1683 aa31.8■■■□□ 2.68
SHISA9-205ENST00000639941 NLRP6P59044 892 aa31.8■■■□□ 2.68
SHISA9-205ENST00000639941 SLC12A5Q9H2X9 1139 aa31.79■■■□□ 2.68
SHISA9-205ENST00000639941 PUS7Q96PZ0 661 aaKnown RBP31.78■■■□□ 2.68
SHISA9-205ENST00000639941 CAMTA1Q9Y6Y1 1673 aa31.77■■■□□ 2.68
SHISA9-205ENST00000639941 TMC1Q8TDI8 760 aa31.77■■■□□ 2.68
SHISA9-205ENST00000639941 ONECUT3O60422 494 aaPredicted RBP31.76■■■□□ 2.67
SHISA9-205ENST00000639941 SPATA31A5Q5VU36 1347 aa31.75■■■□□ 2.67
SHISA9-205ENST00000639941 SPATA31A7Q8IWB4 1347 aa31.75■■■□□ 2.67
SHISA9-205ENST00000639941 SEPT12Q8IYM1 358 aa31.75■■■□□ 2.67
SHISA9-205ENST00000639941 TTC21AQ8NDW8 1320 aa31.75■■■□□ 2.67
SHISA9-205ENST00000639941 A0A1W2PP64 1363 aa31.72■■■□□ 2.67
SHISA9-205ENST00000639941 FAM98CQ17RN3 349 aaKnown RBP31.71■■■□□ 2.67
SHISA9-205ENST00000639941 STRN4Q9NRL3 753 aa31.71■■■□□ 2.67
SHISA9-205ENST00000639941 ZRANB1Q9UGI0 708 aa31.7■■■□□ 2.67
SHISA9-205ENST00000639941 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.69■■■□□ 2.66
SHISA9-205ENST00000639941 USP54Q70EL1 1684 aa31.69■■■□□ 2.66
SHISA9-205ENST00000639941 COL18A1P39060 1754 aa31.68■■■□□ 2.66
SHISA9-205ENST00000639941 THSD7AQ9UPZ6 1657 aa31.68■■■□□ 2.66
SHISA9-205ENST00000639941 SPATA31A1Q5TZJ5 1347 aa31.68■■■□□ 2.66
SHISA9-205ENST00000639941 NFAT5O94916 1531 aa31.67■■■□□ 2.66
SHISA9-205ENST00000639941 HDGFL2Q7Z4V5 671 aaPredicted RBP31.67■■■□□ 2.66
SHISA9-205ENST00000639941 EDC4Q6P2E9 1401 aaKnown RBP31.66■■■□□ 2.66
SHISA9-205ENST00000639941 NME9Q86XW9 330 aa31.66■■■□□ 2.66
SHISA9-205ENST00000639941 COL5A2P05997 1499 aaPredicted RBP31.65■■■□□ 2.66
SHISA9-205ENST00000639941 SLC24A1O60721 1099 aa31.65■■■□□ 2.66
SHISA9-205ENST00000639941 USP31Q70CQ4 1352 aa31.65■■■□□ 2.66
SHISA9-205ENST00000639941 NINLQ9Y2I6 1382 aa31.65■■■□□ 2.66
SHISA9-205ENST00000639941 ZBTB7CA1YPR0 619 aa31.64■■■□□ 2.66
SHISA9-205ENST00000639941 TMF1P82094 1093 aa31.64■■■□□ 2.66
SHISA9-205ENST00000639941 LARP1Q6PKG0 1096 aaKnown RBP31.64■■■□□ 2.66
SHISA9-205ENST00000639941 TERF2IPQ9NYB0 399 aa31.64■■■□□ 2.66
SHISA9-205ENST00000639941 AATKQ6ZMQ8 1374 aa31.64■■■□□ 2.66
SHISA9-205ENST00000639941 SOX12O15370 315 aa31.62■■■□□ 2.65
SHISA9-205ENST00000639941 EVA1CP58658 441 aa31.61■■■□□ 2.65
SHISA9-205ENST00000639941 ARHGEF25Q86VW2 580 aa31.61■■■□□ 2.65
SHISA9-205ENST00000639941 A0A0G2JS52 829 aa31.6■■■□□ 2.65
SHISA9-205ENST00000639941 MYT1Q01538 1121 aa31.6■■■□□ 2.65
SHISA9-205ENST00000639941 KRT27Q7Z3Y8 459 aa31.6■■■□□ 2.65
SHISA9-205ENST00000639941 KCNH5Q8NCM2 988 aa31.59■■■□□ 2.65
SHISA9-205ENST00000639941 AXIN2Q9Y2T1 843 aa31.59■■■□□ 2.65
SHISA9-205ENST00000639941 RGPD5Q99666 1765 aa31.58■■■□□ 2.65
SHISA9-205ENST00000639941 USP35Q9P2H5 1018 aa31.58■■■□□ 2.65
SHISA9-205ENST00000639941 OVOS2A0A0J9YW53 1432 aa31.57■■■□□ 2.64
SHISA9-205ENST00000639941 OVOS2Q6IE36 1432 aa31.57■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms