RNA–Protein interactions for RNA: ENST00000639673.1

TRIM43B-202, Transcript of tripartite motif containing 43B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43B, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43B-202ENST00000639673 ACEP12821 1306 aa14.19□□□□□ -0.14
TRIM43B-202ENST00000639673 POLR3AO14802 1390 aaPredicted RBP14.19□□□□□ -0.14
TRIM43B-202ENST00000639673 PPIP5K1Q6PFW1 1433 aa14.19□□□□□ -0.14
TRIM43B-202ENST00000639673 SLIT2O94813 1529 aa14.19□□□□□ -0.14
TRIM43B-202ENST00000639673 RALGAPBQ86X10 1494 aa14.18□□□□□ -0.14
TRIM43B-202ENST00000639673 PLEKHG3A1L390 1219 aa14.17□□□□□ -0.14
TRIM43B-202ENST00000639673 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.17□□□□□ -0.14
TRIM43B-202ENST00000639673 CRYBG1Q9Y4K1 1723 aa14.17□□□□□ -0.14
TRIM43B-202ENST00000639673 PLCH1Q4KWH8 1693 aa14.17□□□□□ -0.14
TRIM43B-202ENST00000639673 CARD11Q9BXL7 1154 aa14.17□□□□□ -0.14
TRIM43B-202ENST00000639673 EVC2Q86UK5 1308 aa14.15□□□□□ -0.14
TRIM43B-202ENST00000639673 UNC5CLQ8IV45 518 aa14.15□□□□□ -0.14
TRIM43B-202ENST00000639673 PCGF6Q9BYE7 350 aa14.15□□□□□ -0.14
TRIM43B-202ENST00000639673 NUTM2GQ5VZR2 741 aa14.14□□□□□ -0.15
TRIM43B-202ENST00000639673 FAM83GA6ND36 823 aa14.14□□□□□ -0.15
TRIM43B-202ENST00000639673 CABP1Q9NZU7 370 aa14.14□□□□□ -0.15
TRIM43B-202ENST00000639673 PHRF1Q9P1Y6 1649 aaKnown RBP14.13□□□□□ -0.15
TRIM43B-202ENST00000639673 GJD4Q96KN9 370 aaPredicted RBP14.13□□□□□ -0.15
TRIM43B-202ENST00000639673 NWD2Q9ULI1 1742 aa14.13□□□□□ -0.15
TRIM43B-202ENST00000639673 GLI3P10071 1580 aa14.12□□□□□ -0.15
TRIM43B-202ENST00000639673 NRAPQ86VF7 1730 aa14.11□□□□□ -0.15
TRIM43B-202ENST00000639673 COL14A1Q05707 1796 aaKnown RBP14.11□□□□□ -0.15
TRIM43B-202ENST00000639673 USP6P35125 1406 aa14.1□□□□□ -0.15
TRIM43B-202ENST00000639673 UPF1Q92900 1129 aaKnown RBP eCLIP14.1□□□□□ -0.15
TRIM43B-202ENST00000639673 SBNO2Q9Y2G9 1366 aa14.1□□□□□ -0.15
TRIM43B-202ENST00000639673 ABTB2Q8N961 1025 aa14.1□□□□□ -0.15
TRIM43B-202ENST00000639673 NRKQ7Z2Y5 1582 aa14.09□□□□□ -0.15
TRIM43B-202ENST00000639673 VPS72Q15906 364 aa14.09□□□□□ -0.15
TRIM43B-202ENST00000639673 BTG4Q9NY30 223 aa14.09□□□□□ -0.15
TRIM43B-202ENST00000639673 KIAA0232Q92628 1395 aa14.09□□□□□ -0.15
TRIM43B-202ENST00000639673 PRDM11Q9NQV5 511 aa14.08□□□□□ -0.16
TRIM43B-202ENST00000639673 CCDC9Q9Y3X0 531 aaKnown RBP14.08□□□□□ -0.16
TRIM43B-202ENST00000639673 ATAD2Q6PL18 1390 aa14.08□□□□□ -0.16
TRIM43B-202ENST00000639673 ZC3H6P61129 1189 aaKnown RBP14.07□□□□□ -0.16
TRIM43B-202ENST00000639673 CHRNA2Q15822 529 aa14.07□□□□□ -0.16
TRIM43B-202ENST00000639673 SSH2Q76I76 1423 aa14.06□□□□□ -0.16
TRIM43B-202ENST00000639673 USP19O94966 1318 aa14.06□□□□□ -0.16
TRIM43B-202ENST00000639673 AKAP12Q02952 1782 aa14.06□□□□□ -0.16
TRIM43B-202ENST00000639673 BRD4O60885 1362 aaPredicted RBP14.06□□□□□ -0.16
TRIM43B-202ENST00000639673 PIK3C2AO00443 1686 aa14.06□□□□□ -0.16
TRIM43B-202ENST00000639673 ST20-MTHFSA0A0A6YYL1 179 aa14.04□□□□□ -0.16
TRIM43B-202ENST00000639673 NLRP13Q86W25 1043 aa14.04□□□□□ -0.16
TRIM43B-202ENST00000639673 CLSPNQ9HAW4 1339 aa14.04□□□□□ -0.16
TRIM43B-202ENST00000639673 CPSF1Q10570 1443 aaKnown RBP14.04□□□□□ -0.16
TRIM43B-202ENST00000639673 GCP02774 474 aa14.03□□□□□ -0.16
TRIM43B-202ENST00000639673 NLRP6P59044 892 aa14.03□□□□□ -0.16
TRIM43B-202ENST00000639673 SEPT12Q8IYM1 358 aa14.03□□□□□ -0.16
TRIM43B-202ENST00000639673 TESK2Q96S53 571 aa14.03□□□□□ -0.16
TRIM43B-202ENST00000639673 BRWD3Q6RI45 1802 aa14.03□□□□□ -0.16
TRIM43B-202ENST00000639673 CD163L1Q9NR16 1453 aa14.03□□□□□ -0.16
TRIM43B-202ENST00000639673 TTC21BQ7Z4L5 1316 aa14.03□□□□□ -0.16
TRIM43B-202ENST00000639673 MON2Q7Z3U7 1717 aa14.03□□□□□ -0.16
TRIM43B-202ENST00000639673 KTN1Q86UP2 1357 aaKnown RBP14.02□□□□□ -0.16
TRIM43B-202ENST00000639673 TMC1Q8TDI8 760 aa14.02□□□□□ -0.16
TRIM43B-202ENST00000639673 ZNF692Q9BU19 519 aaPredicted RBP14.02□□□□□ -0.16
TRIM43B-202ENST00000639673 STRN4Q9NRL3 753 aa14.02□□□□□ -0.16
TRIM43B-202ENST00000639673 SLIT3O75094 1523 aa14.02□□□□□ -0.17
TRIM43B-202ENST00000639673 CPDO75976 1380 aa14.02□□□□□ -0.17
TRIM43B-202ENST00000639673 USP47Q96K76 1375 aa14.02□□□□□ -0.17
TRIM43B-202ENST00000639673 FAM98CQ17RN3 349 aaKnown RBP14.01□□□□□ -0.17
TRIM43B-202ENST00000639673 EP400Q96L91 3159 aa14.01□□□□□ -0.17
TRIM43B-202ENST00000639673 SPATA31A5Q5VU36 1347 aa14.01□□□□□ -0.17
TRIM43B-202ENST00000639673 SPATA31A7Q8IWB4 1347 aa14.01□□□□□ -0.17
TRIM43B-202ENST00000639673 LMO7Q8WWI1 1683 aa14.01□□□□□ -0.17
TRIM43B-202ENST00000639673 A0A0G2JS52 829 aa14.01□□□□□ -0.17
TRIM43B-202ENST00000639673 ONECUT3O60422 494 aaPredicted RBP14.01□□□□□ -0.17
TRIM43B-202ENST00000639673 MYT1Q01538 1121 aa14.01□□□□□ -0.17
TRIM43B-202ENST00000639673 SLC12A5Q9H2X9 1139 aa14.01□□□□□ -0.17
TRIM43B-202ENST00000639673 CAMTA1Q9Y6Y1 1673 aa14□□□□□ -0.17
TRIM43B-202ENST00000639673 CCER1Q8TC90 406 aaPredicted RBP14□□□□□ -0.17
TRIM43B-202ENST00000639673 TIMELESSQ9UNS1 1208 aa14□□□□□ -0.17
TRIM43B-202ENST00000639673 ZBTB7CA1YPR0 619 aa13.99□□□□□ -0.17
TRIM43B-202ENST00000639673 TTC21AQ8NDW8 1320 aa13.99□□□□□ -0.17
TRIM43B-202ENST00000639673 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.98□□□□□ -0.17
TRIM43B-202ENST00000639673 A0A1W2PP64 1363 aa13.98□□□□□ -0.17
TRIM43B-202ENST00000639673 SOX12O15370 315 aa13.98□□□□□ -0.17
TRIM43B-202ENST00000639673 SPATA31A1Q5TZJ5 1347 aa13.98□□□□□ -0.17
TRIM43B-202ENST00000639673 ZRANB1Q9UGI0 708 aa13.98□□□□□ -0.17
TRIM43B-202ENST00000639673 THSD7AQ9UPZ6 1657 aa13.97□□□□□ -0.17
TRIM43B-202ENST00000639673 EVA1CP58658 441 aa13.97□□□□□ -0.17
TRIM43B-202ENST00000639673 LARP1Q6PKG0 1096 aaKnown RBP13.97□□□□□ -0.17
TRIM43B-202ENST00000639673 HDGFL2Q7Z4V5 671 aaPredicted RBP13.97□□□□□ -0.17
TRIM43B-202ENST00000639673 PUS7Q96PZ0 661 aaKnown RBP13.97□□□□□ -0.17
TRIM43B-202ENST00000639673 USP35Q9P2H5 1018 aa13.97□□□□□ -0.17
TRIM43B-202ENST00000639673 COL5A2P05997 1499 aaPredicted RBP13.96□□□□□ -0.17
TRIM43B-202ENST00000639673 KRT27Q7Z3Y8 459 aa13.96□□□□□ -0.17
TRIM43B-202ENST00000639673 NME9Q86XW9 330 aa13.96□□□□□ -0.17
TRIM43B-202ENST00000639673 NFAT5O94916 1531 aa13.95□□□□□ -0.18
TRIM43B-202ENST00000639673 EDC4Q6P2E9 1401 aaKnown RBP13.95□□□□□ -0.18
TRIM43B-202ENST00000639673 AATKQ6ZMQ8 1374 aa13.95□□□□□ -0.18
TRIM43B-202ENST00000639673 TMF1P82094 1093 aa13.95□□□□□ -0.18
TRIM43B-202ENST00000639673 TERF2IPQ9NYB0 399 aa13.95□□□□□ -0.18
TRIM43B-202ENST00000639673 COL18A1P39060 1754 aa13.94□□□□□ -0.18
TRIM43B-202ENST00000639673 USP54Q70EL1 1684 aa13.94□□□□□ -0.18
TRIM43B-202ENST00000639673 USP31Q70CQ4 1352 aa13.94□□□□□ -0.18
TRIM43B-202ENST00000639673 KCNH5Q8NCM2 988 aa13.94□□□□□ -0.18
TRIM43B-202ENST00000639673 NINLQ9Y2I6 1382 aa13.93□□□□□ -0.18
TRIM43B-202ENST00000639673 SLC24A1O60721 1099 aa13.93□□□□□ -0.18
TRIM43B-202ENST00000639673 FAM182BQ5T319 152 aa13.93□□□□□ -0.18
TRIM43B-202ENST00000639673 AXIN2Q9Y2T1 843 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms