RNA–Protein interactions for RNA: ENST00000639394.1

PAX6-256, Transcript of paired box 6, human

TSL 5

Gene PAX6, Length 1,988 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-256	ENST00000639394	PAIP2	Q9BPZ3	127 aa	Known RBP	13.44	□□□□□ -0.26
PAX6-256	ENST00000639394	KNSTRN	Q9Y448	316 aa		13.44	□□□□□ -0.26
PAX6-256	ENST00000639394	ADGB	Q8N7X0	1667 aa		13.44	□□□□□ -0.26
PAX6-256	ENST00000639394	PRIMPOL	Q96LW4	560 aa		13.43	□□□□□ -0.26
PAX6-256	ENST00000639394	RRP7BP	Q9NSQ0	103 aa		13.43	□□□□□ -0.26
PAX6-256	ENST00000639394	MAP3K4	Q9Y6R4	1608 aa		13.43	□□□□□ -0.26
PAX6-256	ENST00000639394	C9orf84	Q5VXU9	1444 aa		13.43	□□□□□ -0.26
PAX6-256	ENST00000639394	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.43	□□□□□ -0.26
PAX6-256	ENST00000639394	MTA1	Q13330	715 aa		13.43	□□□□□ -0.26
PAX6-256	ENST00000639394	HDAC1	Q13547	482 aa	Predicted RBP	13.43	□□□□□ -0.26
PAX6-256	ENST00000639394	ICE2	Q659A1	982 aa		13.43	□□□□□ -0.26
PAX6-256	ENST00000639394	NBPF3	Q9H094	633 aa		13.43	□□□□□ -0.26
PAX6-256	ENST00000639394	NCOA1	Q15788	1441 aa		13.42	□□□□□ -0.26
PAX6-256	ENST00000639394	GUCY2C	P25092	1073 aa		13.42	□□□□□ -0.26
PAX6-256	ENST00000639394	NOP2	P46087	812 aa	Known RBP	13.42	□□□□□ -0.26
PAX6-256	ENST00000639394	TDO2	P48775	406 aa		13.42	□□□□□ -0.26
PAX6-256	ENST00000639394	MYRIP	Q8NFW9	859 aa		13.42	□□□□□ -0.26
PAX6-256	ENST00000639394	FEZ2	Q9UHY8	353 aa	Predicted RBP	13.42	□□□□□ -0.26
PAX6-256	ENST00000639394	RINL	Q6ZS11	566 aa		13.41	□□□□□ -0.26
PAX6-256	ENST00000639394	MPND	Q8N594	471 aa		13.41	□□□□□ -0.26
PAX6-256	ENST00000639394	DNAJC5	Q9H3Z4	198 aa		13.41	□□□□□ -0.26
PAX6-256	ENST00000639394	OGFR	Q9NZT2	677 aa		13.41	□□□□□ -0.26
PAX6-256	ENST00000639394	MAST1	Q9Y2H9	1570 aa		13.41	□□□□□ -0.26
PAX6-256	ENST00000639394	TSPY4	P0CV99	314 aa		13.41	□□□□□ -0.26
PAX6-256	ENST00000639394	TSPY10	P0CW01	314 aa		13.41	□□□□□ -0.26
PAX6-256	ENST00000639394	CDCA8	Q53HL2	280 aa		13.41	□□□□□ -0.26
PAX6-256	ENST00000639394	ANKRD23	Q86SG2	305 aa		13.41	□□□□□ -0.26
PAX6-256	ENST00000639394	UPF2	Q9HAU5	1272 aa	Known RBP	13.41	□□□□□ -0.26
PAX6-256	ENST00000639394	CFAP74	Q9C0B2	1584 aa		13.4	□□□□□ -0.26
PAX6-256	ENST00000639394	ANKRD30A	Q9BXX3	1397 aa		13.4	□□□□□ -0.26
PAX6-256	ENST00000639394	PPP1R12A	O14974	1030 aa	Predicted RBP	13.4	□□□□□ -0.26
PAX6-256	ENST00000639394	RBM25	P49756	843 aa	Known RBP	13.4	□□□□□ -0.26
PAX6-256	ENST00000639394	EP400NL	Q6ZTU2	488 aa		13.4	□□□□□ -0.26
PAX6-256	ENST00000639394	SGSM3	Q96HU1	749 aa		13.4	□□□□□ -0.26
PAX6-256	ENST00000639394	TRAPPC8	Q9Y2L5	1435 aa		13.4	□□□□□ -0.26
PAX6-256	ENST00000639394	LIG1	P18858	919 aa		13.4	□□□□□ -0.27
PAX6-256	ENST00000639394	PDCL2	Q8N4E4	241 aa		13.4	□□□□□ -0.27
PAX6-256	ENST00000639394	NOL7	Q9UMY1	257 aa	Known RBP	13.4	□□□□□ -0.27
PAX6-256	ENST00000639394	ADGRL1	O94910	1474 aa		13.39	□□□□□ -0.27
PAX6-256	ENST00000639394	FAM69C	Q0P6D2	419 aa		13.39	□□□□□ -0.27
PAX6-256	ENST00000639394	TRDN	Q13061	729 aa		13.39	□□□□□ -0.27
PAX6-256	ENST00000639394	KDM6B	O15054	1643 aa		13.38	□□□□□ -0.27
PAX6-256	ENST00000639394	NEO1	Q92859	1461 aa		13.38	□□□□□ -0.27
PAX6-256	ENST00000639394	SCAPER	Q9BY12	1400 aa		13.38	□□□□□ -0.27
PAX6-256	ENST00000639394	ZBTB7C	A1YPR0	619 aa		13.38	□□□□□ -0.27
PAX6-256	ENST00000639394	ATP2B3	Q16720	1220 aa		13.38	□□□□□ -0.27
PAX6-256	ENST00000639394	SWT1	Q5T5J6	900 aa	Known RBP	13.38	□□□□□ -0.27
PAX6-256	ENST00000639394	NEFH	P12036	1026 aa		13.37	□□□□□ -0.27
PAX6-256	ENST00000639394	FAM9B	Q8IZU0	186 aa		13.37	□□□□□ -0.27
PAX6-256	ENST00000639394	KLHL33	A6NCF5	533 aa		13.36	□□□□□ -0.27
PAX6-256	ENST00000639394	RPAIN	Q86UA6	219 aa		13.36	□□□□□ -0.27
PAX6-256	ENST00000639394	EXOC8	Q8IYI6	725 aa		13.36	□□□□□ -0.27
PAX6-256	ENST00000639394	SLC4A3	P48751	1232 aa		13.36	□□□□□ -0.27
PAX6-256	ENST00000639394	ZNF513	Q8N8E2	541 aa	Predicted RBP	13.36	□□□□□ -0.27
PAX6-256	ENST00000639394	STK26	Q9P289	416 aa		13.36	□□□□□ -0.27
PAX6-256	ENST00000639394	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.36	□□□□□ -0.27
PAX6-256	ENST00000639394	PLXNC1	O60486	1568 aa		13.35	□□□□□ -0.27
PAX6-256	ENST00000639394	DHX16	O60231	1041 aa	Known RBP	13.35	□□□□□ -0.27
PAX6-256	ENST00000639394	TSPAN18	Q96SJ8	248 aa		13.35	□□□□□ -0.27
PAX6-256	ENST00000639394	KIF13A	Q9H1H9	1805 aa		13.35	□□□□□ -0.27
PAX6-256	ENST00000639394	DDX11L8	A8MPP1	907 aa		13.34	□□□□□ -0.27
PAX6-256	ENST00000639394	MPHOSPH10	O00566	681 aa	Known RBP	13.34	□□□□□ -0.27
PAX6-256	ENST00000639394	MCM4	P33991	863 aa		13.34	□□□□□ -0.27
PAX6-256	ENST00000639394	LRCH2	Q5VUJ6	765 aa		13.34	□□□□□ -0.27
PAX6-256	ENST00000639394	AFAP1	Q8N556	730 aa		13.34	□□□□□ -0.27
PAX6-256	ENST00000639394	ZBTB9	Q96C00	473 aa		13.34	□□□□□ -0.27
PAX6-256	ENST00000639394	RASSF4	Q9H2L5	321 aa		13.34	□□□□□ -0.27
PAX6-256	ENST00000639394	NUDC	Q9Y266	331 aa		13.34	□□□□□ -0.27
PAX6-256	ENST00000639394	KIF15	Q9NS87	1388 aa		13.34	□□□□□ -0.27
PAX6-256	ENST00000639394	RTEL1-TNFRSF6B	F6WH68	1400 aa		13.34	□□□□□ -0.27
PAX6-256	ENST00000639394	SLFN14	P0C7P3	912 aa		13.34	□□□□□ -0.27
PAX6-256	ENST00000639394	CCDC91	Q7Z6B0	441 aa		13.34	□□□□□ -0.27
PAX6-256	ENST00000639394	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.34	□□□□□ -0.27
PAX6-256	ENST00000639394	PPRC1	Q5VV67	1664 aa	Known RBP	13.34	□□□□□ -0.27
PAX6-256	ENST00000639394	ANKRD50	Q9ULJ7	1429 aa		13.33	□□□□□ -0.28
PAX6-256	ENST00000639394	CTAGE5	O15320	804 aa		13.33	□□□□□ -0.28
PAX6-256	ENST00000639394	TRAK2	O60296	914 aa		13.33	□□□□□ -0.28
PAX6-256	ENST00000639394	ZFYVE16	Q7Z3T8	1539 aa		13.33	□□□□□ -0.28
PAX6-256	ENST00000639394	ZNF518A	Q6AHZ1	1483 aa		13.33	□□□□□ -0.28
PAX6-256	ENST00000639394	POGZ	Q7Z3K3	1410 aa		13.33	□□□□□ -0.28
PAX6-256	ENST00000639394	SPAG9	O60271	1321 aa	Known RBP	13.32	□□□□□ -0.28
PAX6-256	ENST00000639394	GOLGA6L6	A8MZA4	724 aa		13.32	□□□□□ -0.28
PAX6-256	ENST00000639394	JMY	Q8N9B5	988 aa		13.32	□□□□□ -0.28
PAX6-256	ENST00000639394	INO80	Q9ULG1	1556 aa	Predicted RBP	13.32	□□□□□ -0.28
PAX6-256	ENST00000639394	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.32	□□□□□ -0.28
PAX6-256	ENST00000639394	FAM161A	Q3B820	660 aa		13.32	□□□□□ -0.28
PAX6-256	ENST00000639394	RSPH14	Q9UHP6	348 aa		13.32	□□□□□ -0.28
PAX6-256	ENST00000639394	GOLGA6L22	H0YM25	854 aa		13.31	□□□□□ -0.28
PAX6-256	ENST00000639394	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.31	□□□□□ -0.28
PAX6-256	ENST00000639394	KDM5C	P41229	1560 aa		13.31	□□□□□ -0.28
PAX6-256	ENST00000639394	C11orf91	Q3C1V1	193 aa		13.31	□□□□□ -0.28
PAX6-256	ENST00000639394	RGL3	Q3MIN7	710 aa		13.31	□□□□□ -0.28
PAX6-256	ENST00000639394	SIN3A	Q96ST3	1273 aa		13.31	□□□□□ -0.28
PAX6-256	ENST00000639394	ATP7A	Q04656	1500 aa		13.3	□□□□□ -0.28
PAX6-256	ENST00000639394	TEX14	Q8IWB6	1497 aa		13.3	□□□□□ -0.28
PAX6-256	ENST00000639394	BORCS6	Q96GS4	357 aa		13.3	□□□□□ -0.28
PAX6-256	ENST00000639394	PAXBP1	Q9Y5B6	917 aa		13.3	□□□□□ -0.28
PAX6-256	ENST00000639394	DUOX2	Q9NRD8	1548 aa		13.29	□□□□□ -0.28
PAX6-256	ENST00000639394	DENND4B	O75064	1496 aa	Predicted RBP	13.29	□□□□□ -0.28
PAX6-256	ENST00000639394	CCDC189	A1A4V9	331 aa		13.29	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms