RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, human

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMBR1-222	ENST00000638959	BAG6	P46379	1132 aa		4.62	□□□□□ -1.67
LMBR1-222	ENST00000638959	SH3BP2	P78314	561 aa		4.62	□□□□□ -1.67
LMBR1-222	ENST00000638959	SULF1	Q8IWU6	871 aa		4.62	□□□□□ -1.67
LMBR1-222	ENST00000638959	FURIN	P09958	794 aa		4.61	□□□□□ -1.67
LMBR1-222	ENST00000638959	LYPD4	Q6UWN0	246 aa		4.61	□□□□□ -1.67
LMBR1-222	ENST00000638959	CDC14C	A4D256	554 aa		4.6	□□□□□ -1.67
LMBR1-222	ENST00000638959	ZIC2	O95409	532 aa	Predicted RBP	4.6	□□□□□ -1.67
LMBR1-222	ENST00000638959	PTCRA	Q6ISU1	281 aa	Predicted RBP	4.6	□□□□□ -1.67
LMBR1-222	ENST00000638959	PODN	Q7Z5L7	613 aa		4.6	□□□□□ -1.67
LMBR1-222	ENST00000638959	LINC00528	Q8N1L1	170 aa		4.6	□□□□□ -1.67
LMBR1-222	ENST00000638959	NANOS1	Q8WY41	292 aa	Known RBP	4.6	□□□□□ -1.67
LMBR1-222	ENST00000638959	NUDT12	Q9BQG2	462 aa		4.6	□□□□□ -1.67
LMBR1-222	ENST00000638959	ZFAND3	Q9H8U3	227 aa		4.6	□□□□□ -1.67
LMBR1-222	ENST00000638959	ENAM	Q9NRM1	1142 aa		4.6	□□□□□ -1.67
LMBR1-222	ENST00000638959	ADAMTS2	O95450	1211 aa		4.59	□□□□□ -1.67
LMBR1-222	ENST00000638959	JUND	P17535	347 aa		4.59	□□□□□ -1.67
LMBR1-222	ENST00000638959	PTS	Q03393	145 aa		4.59	□□□□□ -1.67
LMBR1-222	ENST00000638959	SOS2	Q07890	1332 aa	Predicted RBP	4.59	□□□□□ -1.67
LMBR1-222	ENST00000638959	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	4.59	□□□□□ -1.67
LMBR1-222	ENST00000638959	LINC01559	Q495D7	138 aa		4.59	□□□□□ -1.67
LMBR1-222	ENST00000638959	NLRP7	Q8WX94	980 aa		4.59	□□□□□ -1.67
LMBR1-222	ENST00000638959	CNTNAP5	Q8WYK1	1306 aa		4.59	□□□□□ -1.67
LMBR1-222	ENST00000638959	ITPKC	Q96DU7	683 aa		4.58	□□□□□ -1.68
LMBR1-222	ENST00000638959	KLF16	Q9BXK1	252 aa	Predicted RBP	4.58	□□□□□ -1.68
LMBR1-222	ENST00000638959	VARS	P26640	1264 aa	Known RBP	4.57	□□□□□ -1.68
LMBR1-222	ENST00000638959	CCDC155	Q8N6L0	562 aa		4.57	□□□□□ -1.68
LMBR1-222	ENST00000638959	BEND7	Q8N7W2	519 aa	Predicted RBP	4.57	□□□□□ -1.68
LMBR1-222	ENST00000638959	CELA2B	P08218	269 aa	Predicted RBP	4.56	□□□□□ -1.68
LMBR1-222	ENST00000638959	SV2A	Q7L0J3	742 aa		4.56	□□□□□ -1.68
LMBR1-222	ENST00000638959	VWA5B2	Q8N398	1253 aa		4.56	□□□□□ -1.68
LMBR1-222	ENST00000638959	MPND	Q8N594	471 aa		4.56	□□□□□ -1.68
LMBR1-222	ENST00000638959	MEIOB	Q8N635	442 aa		4.55	□□□□□ -1.68
LMBR1-222	ENST00000638959	HLA-C	Q95604	372 aa		4.55	□□□□□ -1.68
LMBR1-222	ENST00000638959	FIGNL2	A6NMB9	653 aa		4.54	□□□□□ -1.68
LMBR1-222	ENST00000638959	TTLL8	A6PVC2	850 aa		4.54	□□□□□ -1.68
LMBR1-222	ENST00000638959	ITGA6	P23229	1130 aa		4.54	□□□□□ -1.68
LMBR1-222	ENST00000638959	SRSF11	Q05519	484 aa	Known RBP	4.54	□□□□□ -1.68
LMBR1-222	ENST00000638959	ARID5B	Q14865	1188 aa		4.54	□□□□□ -1.68
LMBR1-222	ENST00000638959	SH3RF1	Q7Z6J0	888 aa		4.54	□□□□□ -1.68
LMBR1-222	ENST00000638959	ZNF511	Q8NB15	262 aa		4.54	□□□□□ -1.68
LMBR1-222	ENST00000638959	NEDD1	Q8NHV4	660 aa		4.54	□□□□□ -1.68
LMBR1-222	ENST00000638959	BAP1	Q92560	729 aa		4.54	□□□□□ -1.68
LMBR1-222	ENST00000638959	UNC93B1	Q9H1C4	597 aa		4.54	□□□□□ -1.68
LMBR1-222	ENST00000638959	CCNYL3	P0C7X3	344 aa		4.53	□□□□□ -1.68
LMBR1-222	ENST00000638959	ZMYM1	Q5SVZ6	1142 aa		4.53	□□□□□ -1.68
LMBR1-222	ENST00000638959	SCO2	A0A1W2PP80	73 aa		4.52	□□□□□ -1.69
LMBR1-222	ENST00000638959	KDM4A	O75164	1064 aa		4.52	□□□□□ -1.69
LMBR1-222	ENST00000638959	HIC1	Q14526	733 aa		4.52	□□□□□ -1.69
LMBR1-222	ENST00000638959	KRTAP19-1	Q8IUB9	90 aa		4.52	□□□□□ -1.69
LMBR1-222	ENST00000638959	FAM174A	Q8TBP5	190 aa		4.52	□□□□□ -1.69
LMBR1-222	ENST00000638959	SLC35F4	A4IF30	521 aa		4.51	□□□□□ -1.69
LMBR1-222	ENST00000638959	NR3C2	P08235	984 aa		4.51	□□□□□ -1.69
LMBR1-222	ENST00000638959	SYMPK	Q92797	1274 aa	Known RBP	4.51	□□□□□ -1.69
LMBR1-222	ENST00000638959	TSEN34	Q9BSV6	310 aa	Known RBP	4.51	□□□□□ -1.69
LMBR1-222	ENST00000638959	KRBA1	A5PL33	1030 aa		4.5	□□□□□ -1.69
LMBR1-222	ENST00000638959	SPTLC1	O15269	473 aa		4.5	□□□□□ -1.69
LMBR1-222	ENST00000638959	MS4A1	P11836	297 aa		4.5	□□□□□ -1.69
LMBR1-222	ENST00000638959	GUCA2A	Q02747	115 aa		4.5	□□□□□ -1.69
LMBR1-222	ENST00000638959	NR5A1	Q13285	461 aa		4.5	□□□□□ -1.69
LMBR1-222	ENST00000638959	GOLGA2P5	Q9HBQ8	144 aa		4.5	□□□□□ -1.69
LMBR1-222	ENST00000638959	CD46	P15529	392 aa		4.49	□□□□□ -1.69
LMBR1-222	ENST00000638959	USP46	P62068	366 aa		4.49	□□□□□ -1.69
LMBR1-222	ENST00000638959	RETREG3	Q86VR2	466 aa		4.49	□□□□□ -1.69
LMBR1-222	ENST00000638959	KRTAP4-7	Q9BYR0	210 aa		4.49	□□□□□ -1.69
LMBR1-222	ENST00000638959	HOXA2	O43364	376 aa		4.48	□□□□□ -1.69
LMBR1-222	ENST00000638959	GAS6	Q14393	721 aa		4.48	□□□□□ -1.69
LMBR1-222	ENST00000638959	CDK15	Q96Q40	435 aa		4.48	□□□□□ -1.69
LMBR1-222	ENST00000638959	BCR	P11274	1271 aa		4.47	□□□□□ -1.69
LMBR1-222	ENST00000638959	ITGB7	P26010	798 aa		4.47	□□□□□ -1.69
LMBR1-222	ENST00000638959	PTPRN	Q16849	979 aa		4.47	□□□□□ -1.69
LMBR1-222	ENST00000638959	ARHGEF1	Q92888	912 aa	Known RBP	4.47	□□□□□ -1.69
LMBR1-222	ENST00000638959	PHOX2B	Q99453	314 aa		4.47	□□□□□ -1.69
LMBR1-222	ENST00000638959	GNPAT	O15228	680 aa		4.46	□□□□□ -1.7
LMBR1-222	ENST00000638959	KCNH2	Q12809	1159 aa		4.46	□□□□□ -1.7
LMBR1-222	ENST00000638959	SEMA6B	Q9H3T3	888 aa		4.46	□□□□□ -1.7
LMBR1-222	ENST00000638959	EVA1B	Q9NVM1	165 aa		4.46	□□□□□ -1.7
LMBR1-222	ENST00000638959	IGF1R	P08069	1367 aa		4.45	□□□□□ -1.7
LMBR1-222	ENST00000638959	MBIP	Q9NS73	344 aa		4.45	□□□□□ -1.7
LMBR1-222	ENST00000638959	C6orf229	H3BNL8	230 aa		4.44	□□□□□ -1.7
LMBR1-222	ENST00000638959	COBL	O75128	1261 aa		4.44	□□□□□ -1.7
LMBR1-222	ENST00000638959	FSHR	P23945	695 aa		4.44	□□□□□ -1.7
LMBR1-222	ENST00000638959	GRM5	P41594	1212 aa		4.44	□□□□□ -1.7
LMBR1-222	ENST00000638959	LCE1D	Q5T752	114 aa		4.44	□□□□□ -1.7
LMBR1-222	ENST00000638959	NBPF11	Q86T75	865 aa		4.44	□□□□□ -1.7
LMBR1-222	ENST00000638959	ALYREF	Q86V81	257 aa	Known RBP	4.44	□□□□□ -1.7
LMBR1-222	ENST00000638959	FOXJ1	Q92949	421 aa		4.44	□□□□□ -1.7
LMBR1-222	ENST00000638959	GRIN2C	Q14957	1233 aa		4.43	□□□□□ -1.7
LMBR1-222	ENST00000638959	AGER	Q15109	404 aa		4.43	□□□□□ -1.7
LMBR1-222	ENST00000638959	SPRYD3	Q8NCJ5	442 aa		4.43	□□□□□ -1.7
LMBR1-222	ENST00000638959	SPINT1	O43278	529 aa		4.42	□□□□□ -1.7
LMBR1-222	ENST00000638959	SNRPN	P63162	240 aa	Known RBP	4.42	□□□□□ -1.7
LMBR1-222	ENST00000638959	BBX	Q8WY36	941 aa	Predicted RBP	4.42	□□□□□ -1.7
LMBR1-222	ENST00000638959	ZFP64	Q9NPA5	681 aa		4.42	□□□□□ -1.7
LMBR1-222	ENST00000638959	MKL2	Q9ULH7	1088 aa		4.42	□□□□□ -1.7
LMBR1-222	ENST00000638959	EMILIN1	Q9Y6C2	1016 aa		4.42	□□□□□ -1.7
LMBR1-222	ENST00000638959	GPR25	O00155	361 aa		4.41	□□□□□ -1.7
LMBR1-222	ENST00000638959	COL8A1	P27658	744 aa		4.41	□□□□□ -1.7
LMBR1-222	ENST00000638959	CTH	P32929	405 aa		4.41	□□□□□ -1.7
LMBR1-222	ENST00000638959	ACD	Q96AP0	544 aa		4.41	□□□□□ -1.7
LMBR1-222	ENST00000638959	SENP3-EIF4A1	A0A087X0R7	540 aa		4.4	□□□□□ -1.71

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