RNA–Protein interactions for RNA: ENST00000638163.1

LINC00598-216, long intergenic non-protein coding RNA 598, humanhuman

TSL 4 BASIC

Gene LINC00598, Length 528 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-216ENST00000638163 AATKQ6ZMQ8 1374 aa13.87□□□□□ -0.19
LINC00598-216ENST00000638163 PPP2R1AP30153 589 aa13.87□□□□□ -0.19
LINC00598-216ENST00000638163 SSH2Q76I76 1423 aa13.87□□□□□ -0.19
LINC00598-216ENST00000638163 FYB1O15117 783 aa13.86□□□□□ -0.19
LINC00598-216ENST00000638163 COG3Q96JB2 828 aa13.86□□□□□ -0.19
LINC00598-216ENST00000638163 C1orf167Q5SNV9 1468 aa13.86□□□□□ -0.19
LINC00598-216ENST00000638163 USP31Q70CQ4 1352 aa13.85□□□□□ -0.19
LINC00598-216ENST00000638163 MST1RQ04912 1400 aa13.85□□□□□ -0.19
LINC00598-216ENST00000638163 TTC21BQ7Z4L5 1316 aa13.85□□□□□ -0.19
LINC00598-216ENST00000638163 UBAP1LF5GYI3 381 aa13.84□□□□□ -0.19
LINC00598-216ENST00000638163 USP54Q70EL1 1684 aa13.83□□□□□ -0.2
LINC00598-216ENST00000638163 PSME1Q06323 249 aa13.83□□□□□ -0.2
LINC00598-216ENST00000638163 KIF24Q5T7B8 1368 aa13.83□□□□□ -0.2
LINC00598-216ENST00000638163 SMG6Q86US8 1419 aaKnown RBP13.82□□□□□ -0.2
LINC00598-216ENST00000638163 TOM1O60784 492 aa13.82□□□□□ -0.2
LINC00598-216ENST00000638163 ESCO1Q5FWF5 840 aa13.82□□□□□ -0.2
LINC00598-216ENST00000638163 NGEFQ8N5V2 710 aa13.82□□□□□ -0.2
LINC00598-216ENST00000638163 PNISRQ8TF01 805 aaKnown RBP13.82□□□□□ -0.2
LINC00598-216ENST00000638163 NPHP3Q7Z494 1330 aa13.82□□□□□ -0.2
LINC00598-216ENST00000638163 OVOS2A0A0J9YW53 1432 aa13.81□□□□□ -0.2
LINC00598-216ENST00000638163 OVOS2Q6IE36 1432 aa13.81□□□□□ -0.2
LINC00598-216ENST00000638163 WDR43Q15061 677 aaKnown RBP eCLIP13.81□□□□□ -0.2
LINC00598-216ENST00000638163 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.8□□□□□ -0.2
LINC00598-216ENST00000638163 GGNBP2Q9H3C7 697 aa13.8□□□□□ -0.2
LINC00598-216ENST00000638163 XIRP1Q702N8 1843 aaKnown RBP13.8□□□□□ -0.2
LINC00598-216ENST00000638163 NUTM2FA1L443 756 aa13.79□□□□□ -0.2
LINC00598-216ENST00000638163 PMFBP1Q8TBY8 1022 aa13.79□□□□□ -0.2
LINC00598-216ENST00000638163 RBM33Q96EV2 1170 aaKnown RBP13.79□□□□□ -0.2
LINC00598-216ENST00000638163 PNNQ9H307 717 aaKnown RBP13.79□□□□□ -0.2
LINC00598-216ENST00000638163 NUDCQ9Y266 331 aa13.79□□□□□ -0.2
LINC00598-216ENST00000638163 SBNO1A3KN83 1393 aa13.79□□□□□ -0.2
LINC00598-216ENST00000638163 CDK12Q9NYV4 1490 aaPredicted RBP13.79□□□□□ -0.2
LINC00598-216ENST00000638163 CNGB1Q14028 1251 aaPredicted RBP13.78□□□□□ -0.2
LINC00598-216ENST00000638163 PNPLA6Q8IY17 1366 aa13.78□□□□□ -0.2
LINC00598-216ENST00000638163 KCNH5Q8NCM2 988 aa13.77□□□□□ -0.21
LINC00598-216ENST00000638163 RGPD8O14715 1765 aaPredicted RBP13.76□□□□□ -0.21
LINC00598-216ENST00000638163 ARHGEF10O15013 1369 aa13.76□□□□□ -0.21
LINC00598-216ENST00000638163 MTHFSP49914 203 aa13.76□□□□□ -0.21
LINC00598-216ENST00000638163 PIP4K2BP78356 416 aa13.76□□□□□ -0.21
LINC00598-216ENST00000638163 NME9Q86XW9 330 aa13.76□□□□□ -0.21
LINC00598-216ENST00000638163 FAM9BQ8IZU0 186 aa13.76□□□□□ -0.21
LINC00598-216ENST00000638163 BLMP54132 1417 aaPredicted RBP13.75□□□□□ -0.21
LINC00598-216ENST00000638163 RTL1A6NKG5 1358 aa13.75□□□□□ -0.21
LINC00598-216ENST00000638163 NCBP3Q53F19 620 aaKnown RBP13.75□□□□□ -0.21
LINC00598-216ENST00000638163 ABTB2Q8N961 1025 aa13.75□□□□□ -0.21
LINC00598-216ENST00000638163 SLAIN2Q9P270 581 aa13.75□□□□□ -0.21
LINC00598-216ENST00000638163 ZBED9Q6R2W3 1325 aa13.74□□□□□ -0.21
LINC00598-216ENST00000638163 CCDC184Q52MB2 194 aa13.74□□□□□ -0.21
LINC00598-216ENST00000638163 PIK3C2AO00443 1686 aa13.74□□□□□ -0.21
LINC00598-216ENST00000638163 NLRP6P59044 892 aa13.73□□□□□ -0.21
LINC00598-216ENST00000638163 YTHDC1Q96MU7 727 aaKnown RBP13.73□□□□□ -0.21
LINC00598-216ENST00000638163 ORAI2Q96SN7 254 aa13.73□□□□□ -0.21
LINC00598-216ENST00000638163 FOXO3O43524 673 aa13.72□□□□□ -0.21
LINC00598-216ENST00000638163 DIAPH1O60610 1272 aaKnown RBP13.72□□□□□ -0.21
LINC00598-216ENST00000638163 PAK3O75914 559 aaPredicted RBP13.72□□□□□ -0.21
LINC00598-216ENST00000638163 TNNT2P45379 298 aaPredicted RBP13.72□□□□□ -0.21
LINC00598-216ENST00000638163 HNRNPUQ00839 825 aaKnown RBP eCLIP13.72□□□□□ -0.21
LINC00598-216ENST00000638163 KRT28Q7Z3Y7 464 aa13.72□□□□□ -0.21
LINC00598-216ENST00000638163 TNS3Q68CZ2 1445 aa13.72□□□□□ -0.21
LINC00598-216ENST00000638163 FLT4P35916 1363 aa13.71□□□□□ -0.21
LINC00598-216ENST00000638163 ABCC6O95255 1503 aa13.71□□□□□ -0.21
LINC00598-216ENST00000638163 TRPM3Q9HCF6 1732 aaPredicted RBP13.71□□□□□ -0.21
LINC00598-216ENST00000638163 POLKQ9UBT6 870 aa13.71□□□□□ -0.21
LINC00598-216ENST00000638163 SLIT3O75094 1523 aa13.7□□□□□ -0.22
LINC00598-216ENST00000638163 USP19O94966 1318 aa13.7□□□□□ -0.22
LINC00598-216ENST00000638163 COL3A1P02461 1466 aaPredicted RBP13.7□□□□□ -0.22
LINC00598-216ENST00000638163 PXDNQ92626 1479 aa13.7□□□□□ -0.22
LINC00598-216ENST00000638163 NEFMP07197 916 aa13.7□□□□□ -0.22
LINC00598-216ENST00000638163 PDE3BQ13370 1112 aa13.7□□□□□ -0.22
LINC00598-216ENST00000638163 BRINP3Q76B58 766 aa13.7□□□□□ -0.22
LINC00598-216ENST00000638163 MED1Q15648 1581 aaPredicted RBP13.7□□□□□ -0.22
LINC00598-216ENST00000638163 PHRF1Q9P1Y6 1649 aaKnown RBP13.69□□□□□ -0.22
LINC00598-216ENST00000638163 SOS2Q07890 1332 aaPredicted RBP13.68□□□□□ -0.22
LINC00598-216ENST00000638163 ALS2Q96Q42 1657 aa13.68□□□□□ -0.22
LINC00598-216ENST00000638163 SHPRHQ149N8 1683 aa13.67□□□□□ -0.22
LINC00598-216ENST00000638163 FCHSD2O94868 740 aa13.67□□□□□ -0.22
LINC00598-216ENST00000638163 HSPA1LP34931 641 aa13.67□□□□□ -0.22
LINC00598-216ENST00000638163 ADAMTS8Q9UP79 889 aa13.67□□□□□ -0.22
LINC00598-216ENST00000638163 NHSL1Q5SYE7 1610 aa13.67□□□□□ -0.22
LINC00598-216ENST00000638163 SPATA31A3Q5VYP0 1347 aa13.66□□□□□ -0.22
LINC00598-216ENST00000638163 AHDC1Q5TGY3 1603 aaPredicted RBP13.66□□□□□ -0.22
LINC00598-216ENST00000638163 RUNDC1Q96C34 613 aa13.66□□□□□ -0.22
LINC00598-216ENST00000638163 NFAT5O94916 1531 aa13.65□□□□□ -0.22
LINC00598-216ENST00000638163 AMPHP49418 695 aa13.65□□□□□ -0.22
LINC00598-216ENST00000638163 PLEKHG2Q9H7P9 1386 aa13.65□□□□□ -0.22
LINC00598-216ENST00000638163 MAP2P11137 1827 aaKnown RBP13.64□□□□□ -0.23
LINC00598-216ENST00000638163 U2AF1L5P0DN76 240 aaPredicted RBP13.64□□□□□ -0.23
LINC00598-216ENST00000638163 U2AF1Q01081 240 aaKnown RBP eCLIP13.64□□□□□ -0.23
LINC00598-216ENST00000638163 EMILIN1Q9Y6C2 1016 aa13.64□□□□□ -0.23
LINC00598-216ENST00000638163 MAP3K19Q56UN5 1328 aa13.64□□□□□ -0.23
LINC00598-216ENST00000638163 MAPK8IP3Q9UPT6 1336 aa13.64□□□□□ -0.23
LINC00598-216ENST00000638163 CPDO75976 1380 aa13.63□□□□□ -0.23
LINC00598-216ENST00000638163 PPM1GO15355 546 aaPredicted RBP13.63□□□□□ -0.23
LINC00598-216ENST00000638163 GCP02774 474 aa13.63□□□□□ -0.23
LINC00598-216ENST00000638163 ZRANB1Q9UGI0 708 aa13.63□□□□□ -0.23
LINC00598-216ENST00000638163 MARF1Q9Y4F3 1742 aaKnown RBP13.63□□□□□ -0.23
LINC00598-216ENST00000638163 IL13P35225 146 aa13.62□□□□□ -0.23
LINC00598-216ENST00000638163 RRS1Q15050 365 aaKnown RBP13.62□□□□□ -0.23
LINC00598-216ENST00000638163 CCDC27Q2M243 656 aa13.62□□□□□ -0.23
LINC00598-216ENST00000638163 IP6K1Q92551 441 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms