RNA–Protein interactions for RNA: ENST00000638041.1

MECP2-225, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-225ENST00000638041 NINLQ9Y2I6 1382 aa9.94□□□□□ -0.82
MECP2-225ENST00000638041 A0A0G2JS52 829 aa9.94□□□□□ -0.82
MECP2-225ENST00000638041 C11orf95C9JLR9 678 aaPredicted RBP9.94□□□□□ -0.82
MECP2-225ENST00000638041 MSH5O43196 834 aa9.94□□□□□ -0.82
MECP2-225ENST00000638041 TMF1P82094 1093 aa9.94□□□□□ -0.82
MECP2-225ENST00000638041 MYT1Q01538 1121 aa9.94□□□□□ -0.82
MECP2-225ENST00000638041 NBPF8Q3BBV2 869 aa9.94□□□□□ -0.82
MECP2-225ENST00000638041 KCNH5Q8NCM2 988 aa9.94□□□□□ -0.82
MECP2-225ENST00000638041 PRDM11Q9NQV5 511 aa9.94□□□□□ -0.82
MECP2-225ENST00000638041 TRPM1Q7Z4N2 1603 aa9.93□□□□□ -0.82
MECP2-225ENST00000638041 PPIP5K1Q6PFW1 1433 aa9.93□□□□□ -0.82
MECP2-225ENST00000638041 SBNO2Q9Y2G9 1366 aa9.93□□□□□ -0.82
MECP2-225ENST00000638041 ACEP12821 1306 aa9.93□□□□□ -0.82
MECP2-225ENST00000638041 CCDC125Q86Z20 511 aa9.93□□□□□ -0.82
MECP2-225ENST00000638041 TTC21AQ8NDW8 1320 aa9.92□□□□□ -0.82
MECP2-225ENST00000638041 POTEAQ6S8J7 498 aa9.92□□□□□ -0.82
MECP2-225ENST00000638041 TMC1Q8TDI8 760 aa9.92□□□□□ -0.82
MECP2-225ENST00000638041 QRICH2Q9H0J4 1663 aa9.92□□□□□ -0.82
MECP2-225ENST00000638041 POLR3AO14802 1390 aaPredicted RBP9.91□□□□□ -0.82
MECP2-225ENST00000638041 PLEKHG5O94827 1062 aa9.91□□□□□ -0.82
MECP2-225ENST00000638041 GJD4Q96KN9 370 aaPredicted RBP9.91□□□□□ -0.82
MECP2-225ENST00000638041 CABP2Q9NPB3 220 aa9.91□□□□□ -0.82
MECP2-225ENST00000638041 CABP1Q9NZU7 370 aa9.91□□□□□ -0.82
MECP2-225ENST00000638041 RALGAPBQ86X10 1494 aa9.91□□□□□ -0.82
MECP2-225ENST00000638041 LRP6O75581 1613 aa9.9□□□□□ -0.82
MECP2-225ENST00000638041 NLRP6P59044 892 aa9.9□□□□□ -0.82
MECP2-225ENST00000638041 RGS17Q9UGC6 210 aaPredicted RBP9.9□□□□□ -0.82
MECP2-225ENST00000638041 RGPD8O14715 1765 aaPredicted RBP9.9□□□□□ -0.82
MECP2-225ENST00000638041 VPS72Q15906 364 aa9.89□□□□□ -0.83
MECP2-225ENST00000638041 MARF1Q9Y4F3 1742 aaKnown RBP9.89□□□□□ -0.83
MECP2-225ENST00000638041 KTN1Q86UP2 1357 aaKnown RBP9.88□□□□□ -0.83
MECP2-225ENST00000638041 BTG4Q9NY30 223 aa9.88□□□□□ -0.83
MECP2-225ENST00000638041 USP32Q8NFA0 1604 aa9.88□□□□□ -0.83
MECP2-225ENST00000638041 PRR36Q9H6K5 1346 aa9.87□□□□□ -0.83
MECP2-225ENST00000638041 THRAP3Q9Y2W1 955 aaKnown RBP9.87□□□□□ -0.83
MECP2-225ENST00000638041 NWD2Q9ULI1 1742 aa9.87□□□□□ -0.83
MECP2-225ENST00000638041 COL14A1Q05707 1796 aaKnown RBP9.86□□□□□ -0.83
MECP2-225ENST00000638041 CABLES1Q8TDN4 633 aa9.86□□□□□ -0.83
MECP2-225ENST00000638041 CDCA7Q9BWT1 371 aaPredicted RBP9.86□□□□□ -0.83
MECP2-225ENST00000638041 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.86□□□□□ -0.83
MECP2-225ENST00000638041 ATRNO75882 1429 aa9.85□□□□□ -0.83
MECP2-225ENST00000638041 USP6P35125 1406 aa9.85□□□□□ -0.83
MECP2-225ENST00000638041 ST20-MTHFSA0A0A6YYL1 179 aa9.85□□□□□ -0.83
MECP2-225ENST00000638041 ZBTB7CA1YPR0 619 aa9.85□□□□□ -0.83
MECP2-225ENST00000638041 GCP02774 474 aa9.85□□□□□ -0.83
MECP2-225ENST00000638041 HMGB2P26583 209 aaKnown RBP9.85□□□□□ -0.83
MECP2-225ENST00000638041 EIF4G2P78344 907 aaKnown RBP eCLIP9.85□□□□□ -0.83
MECP2-225ENST00000638041 PDE3BQ13370 1112 aa9.85□□□□□ -0.83
MECP2-225ENST00000638041 CSB-PGBD3P0DP91 1061 aa9.84□□□□□ -0.83
MECP2-225ENST00000638041 ZC3H6P61129 1189 aaKnown RBP9.84□□□□□ -0.83
MECP2-225ENST00000638041 COG3Q96JB2 828 aa9.84□□□□□ -0.83
MECP2-225ENST00000638041 STRN4Q9NRL3 753 aa9.84□□□□□ -0.83
MECP2-225ENST00000638041 USP47Q96K76 1375 aa9.84□□□□□ -0.83
MECP2-225ENST00000638041 TOPAZ1Q8N9V7 1692 aa9.83□□□□□ -0.84
MECP2-225ENST00000638041 SLIT2O94813 1529 aa9.83□□□□□ -0.84
MECP2-225ENST00000638041 FAM83GA6ND36 823 aa9.83□□□□□ -0.84
MECP2-225ENST00000638041 NUTM2GQ5VZR2 741 aa9.83□□□□□ -0.84
MECP2-225ENST00000638041 KRT27Q7Z3Y8 459 aa9.83□□□□□ -0.84
MECP2-225ENST00000638041 CPDO75976 1380 aa9.83□□□□□ -0.84
MECP2-225ENST00000638041 ALS2Q96Q42 1657 aa9.83□□□□□ -0.84
MECP2-225ENST00000638041 TTC21BQ7Z4L5 1316 aa9.82□□□□□ -0.84
MECP2-225ENST00000638041 EDC4Q6P2E9 1401 aaKnown RBP9.82□□□□□ -0.84
MECP2-225ENST00000638041 TRPM3Q9HCF6 1732 aaPredicted RBP9.82□□□□□ -0.84
MECP2-225ENST00000638041 KIAA0232Q92628 1395 aa9.82□□□□□ -0.84
MECP2-225ENST00000638041 BCL9LQ86UU0 1499 aa9.82□□□□□ -0.84
MECP2-225ENST00000638041 BAG6P46379 1132 aa9.81□□□□□ -0.84
MECP2-225ENST00000638041 TOM1L2Q6ZVM7 507 aa9.81□□□□□ -0.84
MECP2-225ENST00000638041 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.81□□□□□ -0.84
MECP2-225ENST00000638041 SEPT12Q8IYM1 358 aa9.81□□□□□ -0.84
MECP2-225ENST00000638041 TCP11L2Q8N4U5 519 aa9.81□□□□□ -0.84
MECP2-225ENST00000638041 USP19O94966 1318 aa9.81□□□□□ -0.84
MECP2-225ENST00000638041 FAM196AQ6ZSG2 479 aa9.8□□□□□ -0.84
MECP2-225ENST00000638041 UPF1Q92900 1129 aaKnown RBP eCLIP9.8□□□□□ -0.84
MECP2-225ENST00000638041 POLR3GLQ9BT43 218 aa9.8□□□□□ -0.84
MECP2-225ENST00000638041 PLCH1Q4KWH8 1693 aa9.8□□□□□ -0.84
MECP2-225ENST00000638041 AATKQ6ZMQ8 1374 aa9.79□□□□□ -0.84
MECP2-225ENST00000638041 ONECUT3O60422 494 aaPredicted RBP9.79□□□□□ -0.84
MECP2-225ENST00000638041 FAM98CQ17RN3 349 aaKnown RBP9.79□□□□□ -0.84
MECP2-225ENST00000638041 BARGINQ6ZT62 677 aa9.79□□□□□ -0.84
MECP2-225ENST00000638041 USP35Q9P2H5 1018 aa9.79□□□□□ -0.84
MECP2-225ENST00000638041 ZRANB1Q9UGI0 708 aa9.79□□□□□ -0.84
MECP2-225ENST00000638041 RGS12O14924 1447 aa9.79□□□□□ -0.84
MECP2-225ENST00000638041 SMG6Q86US8 1419 aaKnown RBP9.79□□□□□ -0.84
MECP2-225ENST00000638041 SPATA31A5Q5VU36 1347 aa9.79□□□□□ -0.84
MECP2-225ENST00000638041 SPATA31A7Q8IWB4 1347 aa9.79□□□□□ -0.84
MECP2-225ENST00000638041 ANKRD36BQ8N2N9 1353 aa9.78□□□□□ -0.84
MECP2-225ENST00000638041 AMPHP49418 695 aa9.78□□□□□ -0.84
MECP2-225ENST00000638041 CHRNA2Q15822 529 aa9.78□□□□□ -0.84
MECP2-225ENST00000638041 CPSF1Q10570 1443 aaKnown RBP9.78□□□□□ -0.84
MECP2-225ENST00000638041 PHRF1Q9P1Y6 1649 aaKnown RBP9.78□□□□□ -0.84
MECP2-225ENST00000638041 CCDC7Q96M83 1385 aa9.77□□□□□ -0.84
MECP2-225ENST00000638041 ABCA3Q99758 1704 aa9.77□□□□□ -0.85
MECP2-225ENST00000638041 BLMP54132 1417 aaPredicted RBP9.77□□□□□ -0.85
MECP2-225ENST00000638041 CRB1P82279 1406 aa9.77□□□□□ -0.85
MECP2-225ENST00000638041 SOX12O15370 315 aa9.77□□□□□ -0.85
MECP2-225ENST00000638041 SLC12A5Q9H2X9 1139 aa9.77□□□□□ -0.85
MECP2-225ENST00000638041 CGNL1Q0VF96 1302 aa9.77□□□□□ -0.85
MECP2-225ENST00000638041 SPATA31A1Q5TZJ5 1347 aa9.77□□□□□ -0.85
MECP2-225ENST00000638041 ABCC6O95255 1503 aa9.77□□□□□ -0.85
MECP2-225ENST00000638041 USP31Q70CQ4 1352 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms