RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 DYDC1Q8WWB3 177 aa19.49■□□□□ 0.71
CACNA1A-258ENST00000638029 SLC3A2P08195 630 aaKnown RBP19.49■□□□□ 0.71
CACNA1A-258ENST00000638029 CCDC66A2RUB6 948 aa19.49■□□□□ 0.71
CACNA1A-258ENST00000638029 ZNF219Q9P2Y4 722 aaPredicted RBP19.49■□□□□ 0.71
CACNA1A-258ENST00000638029 MYBBP1AQ9BQG0 1328 aaKnown RBP19.49■□□□□ 0.71
CACNA1A-258ENST00000638029 L3MBTL2Q969R5 705 aa19.48■□□□□ 0.71
CACNA1A-258ENST00000638029 LEKR1Q6ZMV7 388 aa19.48■□□□□ 0.71
CACNA1A-258ENST00000638029 ROCK1Q13464 1354 aa19.48■□□□□ 0.71
CACNA1A-258ENST00000638029 ZNF76P36508 570 aa19.48■□□□□ 0.71
CACNA1A-258ENST00000638029 RBM25P49756 843 aaKnown RBP19.48■□□□□ 0.71
CACNA1A-258ENST00000638029 CCDC73Q6ZRK6 1079 aa19.48■□□□□ 0.71
CACNA1A-258ENST00000638029 TSPYL4Q9UJ04 414 aa19.48■□□□□ 0.71
CACNA1A-258ENST00000638029 WIZO95785 1651 aa19.48■□□□□ 0.71
CACNA1A-258ENST00000638029 ANKRD18AQ8IVF6 992 aa19.48■□□□□ 0.71
CACNA1A-258ENST00000638029 RNF214Q8ND24 703 aa19.48■□□□□ 0.71
CACNA1A-258ENST00000638029 CBX1P83916 185 aa19.47■□□□□ 0.71
CACNA1A-258ENST00000638029 SERPINA10Q9UK55 444 aa19.47■□□□□ 0.71
CACNA1A-258ENST00000638029 USP5P45974 858 aa19.47■□□□□ 0.71
CACNA1A-258ENST00000638029 CCDC181Q5TID7 509 aa19.47■□□□□ 0.71
CACNA1A-258ENST00000638029 E9PSI1 815 aa19.47■□□□□ 0.71
CACNA1A-258ENST00000638029 SSBP05455 408 aaKnown RBP eCLIP19.46■□□□□ 0.71
CACNA1A-258ENST00000638029 TRMT1LQ7Z2T5 733 aaKnown RBP19.46■□□□□ 0.71
CACNA1A-258ENST00000638029 COMMD10Q9Y6G5 202 aa19.46■□□□□ 0.71
CACNA1A-258ENST00000638029 SDF4Q9BRK5 362 aa19.46■□□□□ 0.71
CACNA1A-258ENST00000638029 ERLIN2O94905 339 aa19.46■□□□□ 0.71
CACNA1A-258ENST00000638029 DEF6Q9H4E7 631 aa19.46■□□□□ 0.71
CACNA1A-258ENST00000638029 ANAPC15P60006 121 aa19.46■□□□□ 0.7
CACNA1A-258ENST00000638029 MPNDQ8N594 471 aa19.46■□□□□ 0.7
CACNA1A-258ENST00000638029 VGFO15240 615 aaPredicted RBP19.45■□□□□ 0.7
CACNA1A-258ENST00000638029 CHMP5Q9NZZ3 219 aa19.45■□□□□ 0.7
CACNA1A-258ENST00000638029 TBC1D2BQ9UPU7 963 aa19.45■□□□□ 0.7
CACNA1A-258ENST00000638029 TDRD9Q8NDG6 1382 aaKnown RBP19.44■□□□□ 0.7
CACNA1A-258ENST00000638029 GRIPAP1Q4V328 841 aa19.44■□□□□ 0.7
CACNA1A-258ENST00000638029 TTC39AQ5SRH9 613 aa19.44■□□□□ 0.7
CACNA1A-258ENST00000638029 SART3Q15020 963 aaKnown RBP19.44■□□□□ 0.7
CACNA1A-258ENST00000638029 CECR2Q9BXF3 1484 aa19.44■□□□□ 0.7
CACNA1A-258ENST00000638029 TXLNAP40222 546 aa19.43■□□□□ 0.7
CACNA1A-258ENST00000638029 ST20-MTHFSA0A0A6YYL1 179 aa19.43■□□□□ 0.7
CACNA1A-258ENST00000638029 TRIM21P19474 475 aaKnown RBP19.43■□□□□ 0.7
CACNA1A-258ENST00000638029 ZNF526Q8TF50 670 aaPredicted RBP19.43■□□□□ 0.7
CACNA1A-258ENST00000638029 ERC1Q8IUD2 1116 aa19.42■□□□□ 0.7
CACNA1A-258ENST00000638029 EZRP15311 586 aaKnown RBP19.42■□□□□ 0.7
CACNA1A-258ENST00000638029 COG6Q9Y2V7 657 aa19.42■□□□□ 0.7
CACNA1A-258ENST00000638029 CRBNQ96SW2 442 aa19.42■□□□□ 0.7
CACNA1A-258ENST00000638029 VTI1AQ96AJ9 217 aa19.41■□□□□ 0.7
CACNA1A-258ENST00000638029 DESP17661 470 aa19.41■□□□□ 0.7
CACNA1A-258ENST00000638029 LIG1P18858 919 aa19.41■□□□□ 0.7
CACNA1A-258ENST00000638029 WDHD1O75717 1129 aaPredicted RBP19.4■□□□□ 0.7
CACNA1A-258ENST00000638029 NUP133Q8WUM0 1156 aa19.4■□□□□ 0.7
CACNA1A-258ENST00000638029 CCDC112Q8NEF3 446 aa19.4■□□□□ 0.7
CACNA1A-258ENST00000638029 ZMYND15Q9H091 742 aa19.4■□□□□ 0.7
CACNA1A-258ENST00000638029 RIPK4P57078 832 aa19.4■□□□□ 0.7
CACNA1A-258ENST00000638029 NAT10Q9H0A0 1025 aaKnown RBP19.4■□□□□ 0.7
CACNA1A-258ENST00000638029 DDX19BQ9UMR2 479 aa19.4■□□□□ 0.7
CACNA1A-258ENST00000638029 ESCO1Q5FWF5 840 aa19.4■□□□□ 0.7
CACNA1A-258ENST00000638029 ERICH4A6NGS2 130 aa19.39■□□□□ 0.7
CACNA1A-258ENST00000638029 CCDC113Q9H0I3 377 aa19.39■□□□□ 0.7
CACNA1A-258ENST00000638029 SMARCE1Q969G3 411 aa19.39■□□□□ 0.69
CACNA1A-258ENST00000638029 LRRFIP2Q9Y608 721 aaKnown RBP19.39■□□□□ 0.69
CACNA1A-258ENST00000638029 CEP63Q96MT8 703 aa19.39■□□□□ 0.69
CACNA1A-258ENST00000638029 STK3Q13188 491 aa19.39■□□□□ 0.69
CACNA1A-258ENST00000638029 CCDC88BA6NC98 1476 aa19.39■□□□□ 0.69
CACNA1A-258ENST00000638029 DIAPH1O60610 1272 aaKnown RBP19.38■□□□□ 0.69
CACNA1A-258ENST00000638029 TRIM5Q9C035 493 aa19.38■□□□□ 0.69
CACNA1A-258ENST00000638029 MYL6BP14649 208 aa19.38■□□□□ 0.69
CACNA1A-258ENST00000638029 AEBP1Q8IUX7 1158 aa19.38■□□□□ 0.69
CACNA1A-258ENST00000638029 KIAA0754O94854 1291 aa19.38■□□□□ 0.69
CACNA1A-258ENST00000638029 ERC2O15083 957 aa19.38■□□□□ 0.69
CACNA1A-258ENST00000638029 TICAM2Q86XR7 235 aa19.38■□□□□ 0.69
CACNA1A-258ENST00000638029 HOMER2Q9NSB8 354 aa19.38■□□□□ 0.69
CACNA1A-258ENST00000638029 MRPS9P82933 396 aaKnown RBP19.37■□□□□ 0.69
CACNA1A-258ENST00000638029 FILIP1LQ4L180 1135 aa19.37■□□□□ 0.69
CACNA1A-258ENST00000638029 ERCC4Q92889 916 aaPredicted RBP19.36■□□□□ 0.69
CACNA1A-258ENST00000638029 DDX23Q9BUQ8 820 aaKnown RBP19.36■□□□□ 0.69
CACNA1A-258ENST00000638029 FHOD3Q2V2M9 1422 aa19.36■□□□□ 0.69
CACNA1A-258ENST00000638029 MAP4K4O95819 1239 aaPredicted RBP19.36■□□□□ 0.69
CACNA1A-258ENST00000638029 INTS3Q68E01 1043 aaKnown RBP19.36■□□□□ 0.69
CACNA1A-258ENST00000638029 ABTB2Q8N961 1025 aa19.36■□□□□ 0.69
CACNA1A-258ENST00000638029 MAP3K9P80192 1104 aa19.36■□□□□ 0.69
CACNA1A-258ENST00000638029 SIL1Q9H173 461 aa19.36■□□□□ 0.69
CACNA1A-258ENST00000638029 NFKBIBQ15653 356 aa19.36■□□□□ 0.69
CACNA1A-258ENST00000638029 C16orf71Q8IYS4 520 aaPredicted RBP19.36■□□□□ 0.69
CACNA1A-258ENST00000638029 FSD1Q9BTV5 496 aa19.34■□□□□ 0.69
CACNA1A-258ENST00000638029 PDE4AP27815 886 aa19.34■□□□□ 0.69
CACNA1A-258ENST00000638029 RRP1P56182 461 aaKnown RBP19.34■□□□□ 0.69
CACNA1A-258ENST00000638029 TOM1L2Q6ZVM7 507 aa19.34■□□□□ 0.69
CACNA1A-258ENST00000638029 NINLQ9Y2I6 1382 aa19.33■□□□□ 0.69
CACNA1A-258ENST00000638029 WWC3Q9ULE0 1092 aa19.33■□□□□ 0.69
CACNA1A-258ENST00000638029 SERPINC1P01008 464 aa19.33■□□□□ 0.68
CACNA1A-258ENST00000638029 UBE4AQ14139 1066 aa19.33■□□□□ 0.68
CACNA1A-258ENST00000638029 NASPP49321 788 aaPredicted RBP19.33■□□□□ 0.68
CACNA1A-258ENST00000638029 GNL3LQ9NVN8 582 aaKnown RBP19.33■□□□□ 0.68
CACNA1A-258ENST00000638029 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.32■□□□□ 0.68
CACNA1A-258ENST00000638029 ZNF354CQ86Y25 554 aa19.32■□□□□ 0.68
CACNA1A-258ENST00000638029 CCDC85AQ96PX6 553 aaPredicted RBP19.32■□□□□ 0.68
CACNA1A-258ENST00000638029 STAC3Q96MF2 364 aa19.32■□□□□ 0.68
CACNA1A-258ENST00000638029 GOPCQ9HD26 462 aa19.31■□□□□ 0.68
CACNA1A-258ENST00000638029 APAF1O14727 1248 aa19.31■□□□□ 0.68
CACNA1A-258ENST00000638029 MPHOSPH8Q99549 860 aa19.31■□□□□ 0.68
CACNA1A-258ENST00000638029 TNNT1P13805 278 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms