RNA–Protein interactions for RNA: ENST00000637538.1

CLCN2-220, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 1,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-220ENST00000637538 C14orf37Q86TY3 774 aa22.63■■□□□ 1.21
CLCN2-220ENST00000637538 MORC1Q86VD1 984 aa22.63■■□□□ 1.21
CLCN2-220ENST00000637538 PNISRQ8TF01 805 aaKnown RBP22.62■■□□□ 1.21
CLCN2-220ENST00000637538 YTHDC1Q96MU7 727 aaKnown RBP22.62■■□□□ 1.21
CLCN2-220ENST00000637538 PMFBP1Q8TBY8 1022 aa22.61■■□□□ 1.21
CLCN2-220ENST00000637538 GGNBP2Q9H3C7 697 aa22.61■■□□□ 1.21
CLCN2-220ENST00000637538 C1orf167Q5SNV9 1468 aa22.61■■□□□ 1.21
CLCN2-220ENST00000637538 MST1RQ04912 1400 aa22.6■■□□□ 1.21
CLCN2-220ENST00000637538 TTC21BQ7Z4L5 1316 aa22.59■■□□□ 1.21
CLCN2-220ENST00000637538 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.59■■□□□ 1.21
CLCN2-220ENST00000637538 PHF8Q9UPP1 1060 aa22.59■■□□□ 1.21
CLCN2-220ENST00000637538 MSH6P52701 1360 aa22.58■■□□□ 1.21
CLCN2-220ENST00000637538 PIP4K2BP78356 416 aa22.57■■□□□ 1.2
CLCN2-220ENST00000637538 NME9Q86XW9 330 aa22.57■■□□□ 1.2
CLCN2-220ENST00000637538 NGDNQ8NEJ9 315 aaKnown RBP22.57■■□□□ 1.2
CLCN2-220ENST00000637538 KIF1AQ12756 1690 aa22.56■■□□□ 1.2
CLCN2-220ENST00000637538 TTC21AQ8NDW8 1320 aa22.55■■□□□ 1.2
CLCN2-220ENST00000637538 SCAF1Q9H7N4 1312 aaKnown RBP22.55■■□□□ 1.2
CLCN2-220ENST00000637538 OVOS2A0A0J9YW53 1432 aa22.55■■□□□ 1.2
CLCN2-220ENST00000637538 OVOS2Q6IE36 1432 aa22.55■■□□□ 1.2
CLCN2-220ENST00000637538 ATF3P18847 181 aa22.54■■□□□ 1.2
CLCN2-220ENST00000637538 USP54Q70EL1 1684 aa22.54■■□□□ 1.2
CLCN2-220ENST00000637538 ESCO1Q5FWF5 840 aa22.53■■□□□ 1.2
CLCN2-220ENST00000637538 CADPS2Q86UW7 1296 aa22.53■■□□□ 1.2
CLCN2-220ENST00000637538 FAM9BQ8IZU0 186 aa22.53■■□□□ 1.2
CLCN2-220ENST00000637538 PIK3C2AO00443 1686 aa22.53■■□□□ 1.2
CLCN2-220ENST00000637538 ORAI2Q96SN7 254 aa22.52■■□□□ 1.2
CLCN2-220ENST00000637538 ZRANB1Q9UGI0 708 aa22.52■■□□□ 1.2
CLCN2-220ENST00000637538 TNNT2P45379 298 aaPredicted RBP22.52■■□□□ 1.19
CLCN2-220ENST00000637538 INSRP06213 1382 aa22.51■■□□□ 1.19
CLCN2-220ENST00000637538 USP31Q70CQ4 1352 aa22.51■■□□□ 1.19
CLCN2-220ENST00000637538 SLAIN2Q9P270 581 aa22.51■■□□□ 1.19
CLCN2-220ENST00000637538 AATKQ6ZMQ8 1374 aa22.5■■□□□ 1.19
CLCN2-220ENST00000637538 MARF1Q9Y4F3 1742 aaKnown RBP22.49■■□□□ 1.19
CLCN2-220ENST00000637538 SMG6Q86US8 1419 aaKnown RBP22.49■■□□□ 1.19
CLCN2-220ENST00000637538 SHPRHQ149N8 1683 aa22.48■■□□□ 1.19
CLCN2-220ENST00000637538 MTHFSP49914 203 aa22.48■■□□□ 1.19
CLCN2-220ENST00000637538 COG3Q96JB2 828 aa22.48■■□□□ 1.19
CLCN2-220ENST00000637538 TRPM3Q9HCF6 1732 aaPredicted RBP22.48■■□□□ 1.19
CLCN2-220ENST00000637538 COL3A1P02461 1466 aaPredicted RBP22.47■■□□□ 1.19
CLCN2-220ENST00000637538 CENPBP07199 599 aaPredicted RBP22.46■■□□□ 1.19
CLCN2-220ENST00000637538 PNPLA6Q8IY17 1366 aa22.45■■□□□ 1.18
CLCN2-220ENST00000637538 HSPA1LP34931 641 aa22.45■■□□□ 1.18
CLCN2-220ENST00000637538 BLMP54132 1417 aaPredicted RBP22.44■■□□□ 1.18
CLCN2-220ENST00000637538 MAP2P11137 1827 aaKnown RBP22.44■■□□□ 1.18
CLCN2-220ENST00000637538 POLKQ9UBT6 870 aa22.43■■□□□ 1.18
CLCN2-220ENST00000637538 FOXO3O43524 673 aa22.42■■□□□ 1.18
CLCN2-220ENST00000637538 PSME1Q06323 249 aa22.42■■□□□ 1.18
CLCN2-220ENST00000637538 FBLN1P23142 703 aa22.4■■□□□ 1.18
CLCN2-220ENST00000637538 HNRNPUQ00839 825 aaKnown RBP eCLIP22.4■■□□□ 1.18
CLCN2-220ENST00000637538 CFAP53Q96M91 514 aa22.4■■□□□ 1.18
CLCN2-220ENST00000637538 ADAMTS8Q9UP79 889 aa22.4■■□□□ 1.18
CLCN2-220ENST00000637538 CDK12Q9NYV4 1490 aaPredicted RBP22.4■■□□□ 1.18
CLCN2-220ENST00000637538 ALS2Q96Q42 1657 aa22.39■■□□□ 1.17
CLCN2-220ENST00000637538 PXDNQ92626 1479 aa22.38■■□□□ 1.17
CLCN2-220ENST00000637538 WDR43Q15061 677 aaKnown RBP eCLIP22.37■■□□□ 1.17
CLCN2-220ENST00000637538 BRINP3Q76B58 766 aa22.37■■□□□ 1.17
CLCN2-220ENST00000637538 KRT28Q7Z3Y7 464 aa22.37■■□□□ 1.17
CLCN2-220ENST00000637538 ABTB2Q8N961 1025 aa22.36■■□□□ 1.17
CLCN2-220ENST00000637538 EMILIN1Q9Y6C2 1016 aa22.36■■□□□ 1.17
CLCN2-220ENST00000637538 PAK3O75914 559 aaPredicted RBP22.36■■□□□ 1.17
CLCN2-220ENST00000637538 NLRP6P59044 892 aa22.36■■□□□ 1.17
CLCN2-220ENST00000637538 PEAK1Q9H792 1746 aa22.35■■□□□ 1.17
CLCN2-220ENST00000637538 SBNO1A3KN83 1393 aa22.35■■□□□ 1.17
CLCN2-220ENST00000637538 NPHP3Q7Z494 1330 aa22.35■■□□□ 1.17
CLCN2-220ENST00000637538 XPCQ01831 940 aaPredicted RBP22.35■■□□□ 1.17
CLCN2-220ENST00000637538 ZBED9Q6R2W3 1325 aa22.34■■□□□ 1.17
CLCN2-220ENST00000637538 SLIT3O75094 1523 aa22.34■■□□□ 1.17
CLCN2-220ENST00000637538 ROBO1Q9Y6N7 1651 aa22.34■■□□□ 1.17
CLCN2-220ENST00000637538 NFAT5O94916 1531 aa22.33■■□□□ 1.17
CLCN2-220ENST00000637538 RRS1Q15050 365 aaKnown RBP22.33■■□□□ 1.17
CLCN2-220ENST00000637538 DDX17Q92841 729 aaKnown RBP22.31■■□□□ 1.16
CLCN2-220ENST00000637538 NHSL1Q5SYE7 1610 aa22.31■■□□□ 1.16
CLCN2-220ENST00000637538 USP19O94966 1318 aa22.31■■□□□ 1.16
CLCN2-220ENST00000637538 NUTM2GQ5VZR2 741 aa22.31■■□□□ 1.16
CLCN2-220ENST00000637538 MAP3K19Q56UN5 1328 aa22.29■■□□□ 1.16
CLCN2-220ENST00000637538 TNS3Q68CZ2 1445 aa22.29■■□□□ 1.16
CLCN2-220ENST00000637538 DIAPH1O60610 1272 aaKnown RBP22.29■■□□□ 1.16
CLCN2-220ENST00000637538 KIF24Q5T7B8 1368 aa22.29■■□□□ 1.16
CLCN2-220ENST00000637538 PHRF1Q9P1Y6 1649 aaKnown RBP22.28■■□□□ 1.16
CLCN2-220ENST00000637538 SOS2Q07890 1332 aaPredicted RBP22.28■■□□□ 1.16
CLCN2-220ENST00000637538 PPM1GO15355 546 aaPredicted RBP22.27■■□□□ 1.16
CLCN2-220ENST00000637538 MED1Q15648 1581 aaPredicted RBP22.27■■□□□ 1.16
CLCN2-220ENST00000637538 IL13P35225 146 aa22.26■■□□□ 1.15
CLCN2-220ENST00000637538 NUDCQ9Y266 331 aa22.26■■□□□ 1.15
CLCN2-220ENST00000637538 SPATA31A3Q5VYP0 1347 aa22.26■■□□□ 1.15
CLCN2-220ENST00000637538 CRYBG1Q9Y4K1 1723 aa22.26■■□□□ 1.15
CLCN2-220ENST00000637538 FLT4P35916 1363 aa22.25■■□□□ 1.15
CLCN2-220ENST00000637538 LTN1O94822 1766 aa22.24■■□□□ 1.15
CLCN2-220ENST00000637538 SOX12O15370 315 aa22.24■■□□□ 1.15
CLCN2-220ENST00000637538 KCNH5Q8NCM2 988 aa22.24■■□□□ 1.15
CLCN2-220ENST00000637538 RTL1A6NKG5 1358 aa22.23■■□□□ 1.15
CLCN2-220ENST00000637538 AHDC1Q5TGY3 1603 aaPredicted RBP22.23■■□□□ 1.15
CLCN2-220ENST00000637538 RGPD1P0DJD0 1748 aa22.23■■□□□ 1.15
CLCN2-220ENST00000637538 ARHGEF10O15013 1369 aa22.23■■□□□ 1.15
CLCN2-220ENST00000637538 U2AF1L5P0DN76 240 aaPredicted RBP22.22■■□□□ 1.15
CLCN2-220ENST00000637538 U2AF1Q01081 240 aaKnown RBP eCLIP22.22■■□□□ 1.15
CLCN2-220ENST00000637538 GCP02774 474 aa22.21■■□□□ 1.15
CLCN2-220ENST00000637538 CCDC146Q8IYE0 955 aa22.21■■□□□ 1.15
CLCN2-220ENST00000637538 EIF4A2Q14240 407 aaKnown RBP22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms