RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 CCDC9Q9Y3X0 531 aaKnown RBP27.09■■□□□ 1.93
CLN6-221ENST00000637494 TOPAZ1Q8N9V7 1692 aa27.08■■□□□ 1.93
CLN6-221ENST00000637494 PLEKHG3A1L390 1219 aa27.08■■□□□ 1.93
CLN6-221ENST00000637494 POLR3AO14802 1390 aaPredicted RBP27.08■■□□□ 1.93
CLN6-221ENST00000637494 PLCH1Q4KWH8 1693 aa27.08■■□□□ 1.92
CLN6-221ENST00000637494 NWD2Q9ULI1 1742 aa27.07■■□□□ 1.92
CLN6-221ENST00000637494 NBPF8Q3BBV2 869 aa27.07■■□□□ 1.92
CLN6-221ENST00000637494 TONSLQ96HA7 1378 aa27.07■■□□□ 1.92
CLN6-221ENST00000637494 VPS72Q15906 364 aa27.06■■□□□ 1.92
CLN6-221ENST00000637494 RALGAPBQ86X10 1494 aa27.06■■□□□ 1.92
CLN6-221ENST00000637494 FAM83GA6ND36 823 aa27.05■■□□□ 1.92
CLN6-221ENST00000637494 CABP2Q9NPB3 220 aa27.05■■□□□ 1.92
CLN6-221ENST00000637494 PPIP5K1Q6PFW1 1433 aa27.05■■□□□ 1.92
CLN6-221ENST00000637494 EVC2Q86UK5 1308 aa27.04■■□□□ 1.92
CLN6-221ENST00000637494 COL14A1Q05707 1796 aaKnown RBP27.02■■□□□ 1.92
CLN6-221ENST00000637494 PRDM11Q9NQV5 511 aa27.01■■□□□ 1.91
CLN6-221ENST00000637494 BTG4Q9NY30 223 aa27.01■■□□□ 1.91
CLN6-221ENST00000637494 GLI3P10071 1580 aa27■■□□□ 1.91
CLN6-221ENST00000637494 ABTB2Q8N961 1025 aa26.99■■□□□ 1.91
CLN6-221ENST00000637494 NUTM2GQ5VZR2 741 aa26.98■■□□□ 1.91
CLN6-221ENST00000637494 BRD4O60885 1362 aaPredicted RBP26.97■■□□□ 1.91
CLN6-221ENST00000637494 CRYBG1Q9Y4K1 1723 aa26.96■■□□□ 1.91
CLN6-221ENST00000637494 CARD11Q9BXL7 1154 aa26.96■■□□□ 1.91
CLN6-221ENST00000637494 CABP1Q9NZU7 370 aa26.96■■□□□ 1.91
CLN6-221ENST00000637494 A0A0G2JS52 829 aa26.95■■□□□ 1.9
CLN6-221ENST00000637494 MYT1Q01538 1121 aa26.95■■□□□ 1.9
CLN6-221ENST00000637494 SEPT12Q8IYM1 358 aa26.95■■□□□ 1.9
CLN6-221ENST00000637494 NLRP13Q86W25 1043 aa26.94■■□□□ 1.9
CLN6-221ENST00000637494 PHRF1Q9P1Y6 1649 aaKnown RBP26.94■■□□□ 1.9
CLN6-221ENST00000637494 CCDC125Q86Z20 511 aa26.93■■□□□ 1.9
CLN6-221ENST00000637494 KIAA0232Q92628 1395 aa26.93■■□□□ 1.9
CLN6-221ENST00000637494 NRAPQ86VF7 1730 aa26.92■■□□□ 1.9
CLN6-221ENST00000637494 ZC3H6P61129 1189 aaKnown RBP26.91■■□□□ 1.9
CLN6-221ENST00000637494 ONECUT3O60422 494 aaPredicted RBP26.9■■□□□ 1.9
CLN6-221ENST00000637494 USP6P35125 1406 aa26.89■■□□□ 1.89
CLN6-221ENST00000637494 CHRNA2Q15822 529 aa26.88■■□□□ 1.89
CLN6-221ENST00000637494 ZNF692Q9BU19 519 aaPredicted RBP26.88■■□□□ 1.89
CLN6-221ENST00000637494 FAM98CQ17RN3 349 aaKnown RBP26.87■■□□□ 1.89
CLN6-221ENST00000637494 EVA1CP58658 441 aa26.86■■□□□ 1.89
CLN6-221ENST00000637494 KRT27Q7Z3Y8 459 aa26.86■■□□□ 1.89
CLN6-221ENST00000637494 STRN4Q9NRL3 753 aa26.86■■□□□ 1.89
CLN6-221ENST00000637494 USP19O94966 1318 aa26.86■■□□□ 1.89
CLN6-221ENST00000637494 SPATA31A5Q5VU36 1347 aa26.86■■□□□ 1.89
CLN6-221ENST00000637494 SPATA31A7Q8IWB4 1347 aa26.86■■□□□ 1.89
CLN6-221ENST00000637494 SBNO2Q9Y2G9 1366 aa26.85■■□□□ 1.89
CLN6-221ENST00000637494 NLRP6P59044 892 aa26.85■■□□□ 1.89
CLN6-221ENST00000637494 BRWD3Q6RI45 1802 aa26.84■■□□□ 1.89
CLN6-221ENST00000637494 SF3B2Q13435 895 aaKnown RBP26.84■■□□□ 1.89
CLN6-221ENST00000637494 NRKQ7Z2Y5 1582 aa26.84■■□□□ 1.89
CLN6-221ENST00000637494 GCP02774 474 aa26.83■■□□□ 1.89
CLN6-221ENST00000637494 CPDO75976 1380 aa26.83■■□□□ 1.88
CLN6-221ENST00000637494 BLMP54132 1417 aaPredicted RBP26.81■■□□□ 1.88
CLN6-221ENST00000637494 ZBTB7CA1YPR0 619 aa26.78■■□□□ 1.88
CLN6-221ENST00000637494 SPATA31A1Q5TZJ5 1347 aa26.78■■□□□ 1.88
CLN6-221ENST00000637494 TTC21AQ8NDW8 1320 aa26.78■■□□□ 1.88
CLN6-221ENST00000637494 KTN1Q86UP2 1357 aaKnown RBP26.77■■□□□ 1.88
CLN6-221ENST00000637494 TTC21BQ7Z4L5 1316 aa26.77■■□□□ 1.88
CLN6-221ENST00000637494 SSH2Q76I76 1423 aa26.76■■□□□ 1.87
CLN6-221ENST00000637494 SLC24A1O60721 1099 aa26.76■■□□□ 1.87
CLN6-221ENST00000637494 AKAP12Q02952 1782 aa26.76■■□□□ 1.87
CLN6-221ENST00000637494 TMC1Q8TDI8 760 aa26.75■■□□□ 1.87
CLN6-221ENST00000637494 USP35Q9P2H5 1018 aa26.74■■□□□ 1.87
CLN6-221ENST00000637494 CPSF1Q10570 1443 aaKnown RBP26.73■■□□□ 1.87
CLN6-221ENST00000637494 HDGFL2Q7Z4V5 671 aaPredicted RBP26.73■■□□□ 1.87
CLN6-221ENST00000637494 KCNH5Q8NCM2 988 aa26.73■■□□□ 1.87
CLN6-221ENST00000637494 SLIT3O75094 1523 aa26.73■■□□□ 1.87
CLN6-221ENST00000637494 PIK3C2AO00443 1686 aa26.73■■□□□ 1.87
CLN6-221ENST00000637494 CAMTA1Q9Y6Y1 1673 aa26.73■■□□□ 1.87
CLN6-221ENST00000637494 ZRANB1Q9UGI0 708 aa26.72■■□□□ 1.87
CLN6-221ENST00000637494 LMO7Q8WWI1 1683 aa26.71■■□□□ 1.87
CLN6-221ENST00000637494 PUS7Q96PZ0 661 aaKnown RBP26.71■■□□□ 1.87
CLN6-221ENST00000637494 THSD7AQ9UPZ6 1657 aa26.7■■□□□ 1.87
CLN6-221ENST00000637494 LARP1Q6PKG0 1096 aaKnown RBP26.7■■□□□ 1.86
CLN6-221ENST00000637494 AATKQ6ZMQ8 1374 aa26.7■■□□□ 1.86
CLN6-221ENST00000637494 BARGINQ6ZT62 677 aa26.69■■□□□ 1.86
CLN6-221ENST00000637494 TCP11L2Q8N4U5 519 aa26.69■■□□□ 1.86
CLN6-221ENST00000637494 PCGF6Q9BYE7 350 aa26.69■■□□□ 1.86
CLN6-221ENST00000637494 TERF2IPQ9NYB0 399 aa26.69■■□□□ 1.86
CLN6-221ENST00000637494 EP400Q96L91 3159 aa26.68■■□□□ 1.86
CLN6-221ENST00000637494 THRAP3Q9Y2W1 955 aaKnown RBP26.68■■□□□ 1.86
CLN6-221ENST00000637494 ST20-MTHFSA0A0A6YYL1 179 aa26.67■■□□□ 1.86
CLN6-221ENST00000637494 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.67■■□□□ 1.86
CLN6-221ENST00000637494 CLSPNQ9HAW4 1339 aa26.66■■□□□ 1.86
CLN6-221ENST00000637494 MON2Q7Z3U7 1717 aa26.66■■□□□ 1.86
CLN6-221ENST00000637494 SOX12O15370 315 aa26.66■■□□□ 1.86
CLN6-221ENST00000637494 BAG6P46379 1132 aa26.66■■□□□ 1.86
CLN6-221ENST00000637494 TIMELESSQ9UNS1 1208 aa26.66■■□□□ 1.86
CLN6-221ENST00000637494 COL5A2P05997 1499 aaPredicted RBP26.66■■□□□ 1.86
CLN6-221ENST00000637494 PDE3BQ13370 1112 aa26.65■■□□□ 1.86
CLN6-221ENST00000637494 SLC12A5Q9H2X9 1139 aa26.65■■□□□ 1.86
CLN6-221ENST00000637494 DEFB132Q7Z7B7 95 aa26.64■■□□□ 1.86
CLN6-221ENST00000637494 CRB1P82279 1406 aa26.64■■□□□ 1.85
CLN6-221ENST00000637494 NINLQ9Y2I6 1382 aa26.63■■□□□ 1.85
CLN6-221ENST00000637494 FAM182BQ5T319 152 aa26.63■■□□□ 1.85
CLN6-221ENST00000637494 FAM196AQ6ZSG2 479 aa26.62■■□□□ 1.85
CLN6-221ENST00000637494 TOM1L2Q6ZVM7 507 aa26.62■■□□□ 1.85
CLN6-221ENST00000637494 ARHGEF25Q86VW2 580 aa26.61■■□□□ 1.85
CLN6-221ENST00000637494 TESK2Q96S53 571 aa26.61■■□□□ 1.85
CLN6-221ENST00000637494 EDC4Q6P2E9 1401 aaKnown RBP26.61■■□□□ 1.85
CLN6-221ENST00000637494 CD163L1Q9NR16 1453 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms