RNA–Protein interactions for RNA: ENST00000637354.1

PTPRD-215, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5

Gene PTPRD, Length 891 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-215ENST00000637354 CLUAP1Q96AJ1 413 aa9.14□□□□□ -0.95
PTPRD-215ENST00000637354 TRIM47Q96LD4 638 aa9.14□□□□□ -0.95
PTPRD-215ENST00000637354 STK17AQ9UEE5 414 aa9.14□□□□□ -0.95
PTPRD-215ENST00000637354 ARID3CA6NKF2 412 aa9.13□□□□□ -0.95
PTPRD-215ENST00000637354 MCM6Q14566 821 aa9.13□□□□□ -0.95
PTPRD-215ENST00000637354 NUTM1Q86Y26 1132 aa9.13□□□□□ -0.95
PTPRD-215ENST00000637354 SPIRE2Q8WWL2 714 aa9.13□□□□□ -0.95
PTPRD-215ENST00000637354 ARID3AQ99856 593 aa9.13□□□□□ -0.95
PTPRD-215ENST00000637354 RIC3Q7Z5B4 369 aa9.12□□□□□ -0.95
PTPRD-215ENST00000637354 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.12□□□□□ -0.95
PTPRD-215ENST00000637354 J3QL48 77 aa9.11□□□□□ -0.95
PTPRD-215ENST00000637354 JUNDP17535 347 aa9.11□□□□□ -0.95
PTPRD-215ENST00000637354 CSPP1Q1MSJ5 1256 aa9.11□□□□□ -0.95
PTPRD-215ENST00000637354 LIMD1Q9UGP4 676 aa9.11□□□□□ -0.95
PTPRD-215ENST00000637354 RC3H1Q5TC82 1133 aaKnown RBP9.1□□□□□ -0.95
PTPRD-215ENST00000637354 CCDC24Q8N4L8 307 aa9.1□□□□□ -0.95
PTPRD-215ENST00000637354 APBB1O00213 710 aa9.09□□□□□ -0.95
PTPRD-215ENST00000637354 RFC5P40937 340 aa9.09□□□□□ -0.95
PTPRD-215ENST00000637354 RETREG3Q86VR2 466 aa9.09□□□□□ -0.95
PTPRD-215ENST00000637354 TERTO14746 1132 aaKnown RBP9.08□□□□□ -0.96
PTPRD-215ENST00000637354 SKOR1P84550 965 aa9.08□□□□□ -0.96
PTPRD-215ENST00000637354 HPS1Q92902 700 aa9.08□□□□□ -0.96
PTPRD-215ENST00000637354 MOXD2PA6NHM9 499 aa9.07□□□□□ -0.96
PTPRD-215ENST00000637354 NDUFV2P19404 249 aa9.07□□□□□ -0.96
PTPRD-215ENST00000637354 FBXO31Q5XUX0 539 aaPredicted RBP9.07□□□□□ -0.96
PTPRD-215ENST00000637354 C1orf115Q9H7X2 142 aa9.07□□□□□ -0.96
PTPRD-215ENST00000637354 A6NJR5 290 aa9.06□□□□□ -0.96
PTPRD-215ENST00000637354 RAD21O60216 631 aa9.06□□□□□ -0.96
PTPRD-215ENST00000637354 SNRPBP14678 240 aaKnown RBP9.06□□□□□ -0.96
PTPRD-215ENST00000637354 RSBN1LQ6PCB5 846 aaPredicted RBP9.06□□□□□ -0.96
PTPRD-215ENST00000637354 HLA-CQ95604 372 aa9.06□□□□□ -0.96
PTPRD-215ENST00000637354 SPTLC1O15269 473 aa9.05□□□□□ -0.96
PTPRD-215ENST00000637354 TRAK2O60296 914 aa9.05□□□□□ -0.96
PTPRD-215ENST00000637354 POM121Q96HA1 1249 aa9.05□□□□□ -0.96
PTPRD-215ENST00000637354 NUDT12Q9BQG2 462 aa9.05□□□□□ -0.96
PTPRD-215ENST00000637354 SNRKQ9NRH2 765 aa9.04□□□□□ -0.96
PTPRD-215ENST00000637354 SPDYE5A6NIY4 337 aa9.03□□□□□ -0.96
PTPRD-215ENST00000637354 ALDH1A1P00352 501 aa9.03□□□□□ -0.96
PTPRD-215ENST00000637354 TMEM259Q4ZIN3 620 aa9.03□□□□□ -0.96
PTPRD-215ENST00000637354 NPAS3Q8IXF0 933 aa9.03□□□□□ -0.96
PTPRD-215ENST00000637354 EHBP1Q8NDI1 1231 aa9.03□□□□□ -0.96
PTPRD-215ENST00000637354 NUTM2BA6NNL0 878 aaPredicted RBP9.02□□□□□ -0.97
PTPRD-215ENST00000637354 NUTM2EB1AL46 878 aaPredicted RBP9.02□□□□□ -0.97
PTPRD-215ENST00000637354 SIAH2O43255 324 aa9.02□□□□□ -0.97
PTPRD-215ENST00000637354 QPCTQ16769 361 aa9.02□□□□□ -0.97
PTPRD-215ENST00000637354 NUTM2DQ5VT03 806 aaPredicted RBP9.02□□□□□ -0.97
PTPRD-215ENST00000637354 PPP2R2DQ66LE6 453 aa9.02□□□□□ -0.97
PTPRD-215ENST00000637354 PROSER2Q86WR7 435 aaPredicted RBP9.02□□□□□ -0.97
PTPRD-215ENST00000637354 NUTM2AQ8IVF1 878 aaPredicted RBP9.02□□□□□ -0.97
PTPRD-215ENST00000637354 BANK1Q8NDB2 785 aa9.02□□□□□ -0.97
PTPRD-215ENST00000637354 SLC16A10Q8TF71 515 aa9.02□□□□□ -0.97
PTPRD-215ENST00000637354 PCDHB15Q9Y5E8 787 aa9.02□□□□□ -0.97
PTPRD-215ENST00000637354 SHROOM4Q9ULL8 1493 aa9.02□□□□□ -0.97
PTPRD-215ENST00000637354 CCNYL3P0C7X3 344 aa9.01□□□□□ -0.97
PTPRD-215ENST00000637354 GUCA2AQ02747 115 aa9.01□□□□□ -0.97
PTPRD-215ENST00000637354 TUSC1Q2TAM9 212 aa9.01□□□□□ -0.97
PTPRD-215ENST00000637354 AP1G2O75843 785 aa9□□□□□ -0.97
PTPRD-215ENST00000637354 FDX1P10109 184 aa9□□□□□ -0.97
PTPRD-215ENST00000637354 PTPRNQ16849 979 aa9□□□□□ -0.97
PTPRD-215ENST00000637354 CABLES1Q8TDN4 633 aa9□□□□□ -0.97
PTPRD-215ENST00000637354 ZNF777Q9ULD5 760 aaPredicted RBP9□□□□□ -0.97
PTPRD-215ENST00000637354 WASF2Q9Y6W5 498 aa9□□□□□ -0.97
PTPRD-215ENST00000637354 FAM181BA6NEQ2 426 aa8.99□□□□□ -0.97
PTPRD-215ENST00000637354 LILRB3O75022 631 aa8.99□□□□□ -0.97
PTPRD-215ENST00000637354 RTL5Q5HYW3 569 aaPredicted RBP8.99□□□□□ -0.97
PTPRD-215ENST00000637354 COG6Q9Y2V7 657 aa8.99□□□□□ -0.97
PTPRD-215ENST00000637354 GJA5P36382 358 aa8.98□□□□□ -0.97
PTPRD-215ENST00000637354 SYMPKQ92797 1274 aaKnown RBP8.98□□□□□ -0.97
PTPRD-215ENST00000637354 NXF1Q9UBU9 619 aaKnown RBP8.98□□□□□ -0.97
PTPRD-215ENST00000637354 EIF4G1Q04637 1599 aaKnown RBP8.98□□□□□ -0.97
PTPRD-215ENST00000637354 C6orf229H3BNL8 230 aa8.97□□□□□ -0.97
PTPRD-215ENST00000637354 CAPN5O15484 640 aaPredicted RBP8.97□□□□□ -0.97
PTPRD-215ENST00000637354 LCE2CQ5TA81 110 aa8.97□□□□□ -0.97
PTPRD-215ENST00000637354 PTCRAQ6ISU1 281 aaPredicted RBP8.97□□□□□ -0.97
PTPRD-215ENST00000637354 MPNDQ8N594 471 aa8.97□□□□□ -0.97
PTPRD-215ENST00000637354 CC2D2AQ9P2K1 1620 aa8.97□□□□□ -0.97
PTPRD-215ENST00000637354 SH3BP2P78314 561 aa8.96□□□□□ -0.98
PTPRD-215ENST00000637354 DESI1Q6ICB0 168 aa8.96□□□□□ -0.98
PTPRD-215ENST00000637354 CCDC82Q8N4S0 544 aa8.96□□□□□ -0.98
PTPRD-215ENST00000637354 MTMR14Q8NCE2 650 aa8.96□□□□□ -0.98
PTPRD-215ENST00000637354 ZBTB3Q9H5J0 574 aa8.96□□□□□ -0.98
PTPRD-215ENST00000637354 HRCP23327 699 aa8.95□□□□□ -0.98
PTPRD-215ENST00000637354 FNBP4Q8N3X1 1017 aaPredicted RBP8.95□□□□□ -0.98
PTPRD-215ENST00000637354 IRF7Q92985 503 aa8.95□□□□□ -0.98
PTPRD-215ENST00000637354 UNC93B1Q9H1C4 597 aa8.95□□□□□ -0.98
PTPRD-215ENST00000637354 GDPD2Q9HCC8 539 aa8.95□□□□□ -0.98
PTPRD-215ENST00000637354 EVA1BQ9NVM1 165 aa8.95□□□□□ -0.98
PTPRD-215ENST00000637354 PCDHGC3Q9UN70 934 aa8.95□□□□□ -0.98
PTPRD-215ENST00000637354 PRPF38BQ5VTL8 546 aaKnown RBP8.94□□□□□ -0.98
PTPRD-215ENST00000637354 TRIM46Q7Z4K8 759 aa8.94□□□□□ -0.98
PTPRD-215ENST00000637354 TSC1Q92574 1164 aa8.94□□□□□ -0.98
PTPRD-215ENST00000637354 ZNF330Q9Y3S2 320 aaPredicted RBP8.94□□□□□ -0.98
PTPRD-215ENST00000637354 USP17L8P0C7I0 530 aa8.93□□□□□ -0.98
PTPRD-215ENST00000637354 VARSP26640 1264 aaKnown RBP8.93□□□□□ -0.98
PTPRD-215ENST00000637354 PRM3Q9NNZ6 103 aa8.93□□□□□ -0.98
PTPRD-215ENST00000637354 BMP1P13497 986 aa8.92□□□□□ -0.98
PTPRD-215ENST00000637354 ABL2P42684 1182 aa8.92□□□□□ -0.98
PTPRD-215ENST00000637354 KCNH2Q12809 1159 aa8.92□□□□□ -0.98
PTPRD-215ENST00000637354 MTMR2Q13614 643 aa8.91□□□□□ -0.98
PTPRD-215ENST00000637354 WWC1Q8IX03 1113 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms