RNA–Protein interactions for RNA: ENST00000637194.1

SYNGAP1-220, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-220ENST00000637194 F12P00748 615 aaPredicted RBP3.94□□□□□ -1.78
SYNGAP1-220ENST00000637194 MYSM1Q5VVJ2 828 aa3.94□□□□□ -1.78
SYNGAP1-220ENST00000637194 BAP1Q92560 729 aa3.94□□□□□ -1.78
SYNGAP1-220ENST00000637194 SLC24A3Q9HC58 644 aa3.94□□□□□ -1.78
SYNGAP1-220ENST00000637194 LILRB3O75022 631 aa3.93□□□□□ -1.78
SYNGAP1-220ENST00000637194 CTHP32929 405 aa3.93□□□□□ -1.78
SYNGAP1-220ENST00000637194 LINC01559Q495D7 138 aa3.93□□□□□ -1.78
SYNGAP1-220ENST00000637194 FAM174AQ8TBP5 190 aa3.93□□□□□ -1.78
SYNGAP1-220ENST00000637194 CABLES1Q8TDN4 633 aa3.93□□□□□ -1.78
SYNGAP1-220ENST00000637194 RSPH6AQ9H0K4 717 aa3.93□□□□□ -1.78
SYNGAP1-220ENST00000637194 LIMD1Q9UGP4 676 aa3.93□□□□□ -1.78
SYNGAP1-220ENST00000637194 CAPN5O15484 640 aaPredicted RBP3.92□□□□□ -1.78
SYNGAP1-220ENST00000637194 WFS1O76024 890 aa3.92□□□□□ -1.78
SYNGAP1-220ENST00000637194 CLK2P49760 499 aaKnown RBP3.92□□□□□ -1.78
SYNGAP1-220ENST00000637194 NFX1Q12986 1120 aaKnown RBP3.92□□□□□ -1.78
SYNGAP1-220ENST00000637194 ARMC2Q8NEN0 867 aa3.92□□□□□ -1.78
SYNGAP1-220ENST00000637194 CDK15Q96Q40 435 aa3.92□□□□□ -1.78
SYNGAP1-220ENST00000637194 NUTM2BA6NNL0 878 aaPredicted RBP3.91□□□□□ -1.78
SYNGAP1-220ENST00000637194 NUTM2EB1AL46 878 aaPredicted RBP3.91□□□□□ -1.78
SYNGAP1-220ENST00000637194 SNRPBP14678 240 aaKnown RBP3.91□□□□□ -1.78
SYNGAP1-220ENST00000637194 QPCTQ16769 361 aa3.91□□□□□ -1.78
SYNGAP1-220ENST00000637194 NUTM2DQ5VT03 806 aaPredicted RBP3.91□□□□□ -1.78
SYNGAP1-220ENST00000637194 TRIM46Q7Z4K8 759 aa3.91□□□□□ -1.78
SYNGAP1-220ENST00000637194 NUTM2AQ8IVF1 878 aaPredicted RBP3.91□□□□□ -1.78
SYNGAP1-220ENST00000637194 HELBQ8NG08 1087 aaPredicted RBP3.91□□□□□ -1.78
SYNGAP1-220ENST00000637194 MAP10Q9P2G4 905 aa3.91□□□□□ -1.78
SYNGAP1-220ENST00000637194 TLL2Q9Y6L7 1015 aa3.91□□□□□ -1.78
SYNGAP1-220ENST00000637194 TERTO14746 1132 aaKnown RBP3.9□□□□□ -1.79
SYNGAP1-220ENST00000637194 PER1O15534 1290 aaPredicted RBP3.9□□□□□ -1.79
SYNGAP1-220ENST00000637194 WIPF1O43516 503 aa3.9□□□□□ -1.79
SYNGAP1-220ENST00000637194 ADH1CP00326 375 aa3.9□□□□□ -1.79
SYNGAP1-220ENST00000637194 NNTQ13423 1086 aa3.9□□□□□ -1.79
SYNGAP1-220ENST00000637194 CSPP1Q1MSJ5 1256 aa3.9□□□□□ -1.79
SYNGAP1-220ENST00000637194 NBPF14Q5TI25 921 aa3.9□□□□□ -1.79
SYNGAP1-220ENST00000637194 BPHLQ86WA6 291 aaPredicted RBP3.9□□□□□ -1.79
SYNGAP1-220ENST00000637194 GPKOWQ92917 476 aaPredicted RBP eCLIP3.9□□□□□ -1.79
SYNGAP1-220ENST00000637194 FOXJ1Q92949 421 aa3.9□□□□□ -1.79
SYNGAP1-220ENST00000637194 C1QTNF2Q9BXJ5 285 aa3.9□□□□□ -1.79
SYNGAP1-220ENST00000637194 TIMP2P16035 220 aa3.89□□□□□ -1.79
SYNGAP1-220ENST00000637194 NR5A1Q13285 461 aa3.89□□□□□ -1.79
SYNGAP1-220ENST00000637194 RTL5Q5HYW3 569 aaPredicted RBP3.89□□□□□ -1.79
SYNGAP1-220ENST00000637194 SH3RF1Q7Z6J0 888 aa3.89□□□□□ -1.79
SYNGAP1-220ENST00000637194 NPAS3Q8IXF0 933 aa3.89□□□□□ -1.79
SYNGAP1-220ENST00000637194 KLF16Q9BXK1 252 aaPredicted RBP3.89□□□□□ -1.79
SYNGAP1-220ENST00000637194 BMP1P13497 986 aa3.88□□□□□ -1.79
SYNGAP1-220ENST00000637194 SKIV2LQ15477 1246 aaKnown RBP3.88□□□□□ -1.79
SYNGAP1-220ENST00000637194 C4orf48Q5BLP8 95 aa3.88□□□□□ -1.79
SYNGAP1-220ENST00000637194 SH3D19Q5HYK7 790 aa3.88□□□□□ -1.79
SYNGAP1-220ENST00000637194 TRMT44Q8IYL2 757 aaKnown RBP3.88□□□□□ -1.79
SYNGAP1-220ENST00000637194 TSC1Q92574 1164 aa3.88□□□□□ -1.79
SYNGAP1-220ENST00000637194 DDRGK1Q96HY6 314 aa3.88□□□□□ -1.79
SYNGAP1-220ENST00000637194 NXF1Q9UBU9 619 aaKnown RBP3.88□□□□□ -1.79
SYNGAP1-220ENST00000637194 MAP4K5Q9Y4K4 846 aa3.88□□□□□ -1.79
SYNGAP1-220ENST00000637194 GRM5P41594 1212 aa3.87□□□□□ -1.79
SYNGAP1-220ENST00000637194 WDR4P57081 412 aaKnown RBP3.87□□□□□ -1.79
SYNGAP1-220ENST00000637194 INSM1Q01101 510 aaPredicted RBP3.87□□□□□ -1.79
SYNGAP1-220ENST00000637194 SCARF1Q14162 830 aa3.87□□□□□ -1.79
SYNGAP1-220ENST00000637194 AGERQ15109 404 aa3.87□□□□□ -1.79
SYNGAP1-220ENST00000637194 PPP2R2DQ66LE6 453 aa3.87□□□□□ -1.79
SYNGAP1-220ENST00000637194 MRPL14Q6P1L8 145 aaKnown RBP3.87□□□□□ -1.79
SYNGAP1-220ENST00000637194 SH3BP5LQ7L8J4 393 aa3.87□□□□□ -1.79
SYNGAP1-220ENST00000637194 SLC16A10Q8TF71 515 aa3.87□□□□□ -1.79
SYNGAP1-220ENST00000637194 BCANQ96GW7 911 aa3.87□□□□□ -1.79
SYNGAP1-220ENST00000637194 ZFP42Q96MM3 310 aa3.87□□□□□ -1.79
SYNGAP1-220ENST00000637194 POLR3EQ9NVU0 708 aa3.87□□□□□ -1.79
SYNGAP1-220ENST00000637194 ZC3H4Q9UPT8 1303 aaKnown RBP3.87□□□□□ -1.79
SYNGAP1-220ENST00000637194 LCE2CQ5TA81 110 aa3.86□□□□□ -1.79
SYNGAP1-220ENST00000637194 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.86□□□□□ -1.79
SYNGAP1-220ENST00000637194 KDM4CQ9H3R0 1056 aa3.86□□□□□ -1.79
SYNGAP1-220ENST00000637194 STK17AQ9UEE5 414 aa3.86□□□□□ -1.79
SYNGAP1-220ENST00000637194 H3BM21 787 aa3.85□□□□□ -1.79
SYNGAP1-220ENST00000637194 ZIC2O95409 532 aaPredicted RBP3.85□□□□□ -1.79
SYNGAP1-220ENST00000637194 NR3C2P08235 984 aa3.85□□□□□ -1.79
SYNGAP1-220ENST00000637194 CTDSPL2Q05D32 466 aa3.85□□□□□ -1.79
SYNGAP1-220ENST00000637194 ARID5BQ14865 1188 aa3.85□□□□□ -1.79
SYNGAP1-220ENST00000637194 PDXDC2PQ6P474 469 aa3.85□□□□□ -1.79
SYNGAP1-220ENST00000637194 IRF7Q92985 503 aa3.85□□□□□ -1.79
SYNGAP1-220ENST00000637194 ITPKCQ96DU7 683 aa3.85□□□□□ -1.79
SYNGAP1-220ENST00000637194 CDV3Q9UKY7 258 aaKnown RBP3.85□□□□□ -1.79
SYNGAP1-220ENST00000637194 ERFEQ4G0M1 354 aa3.84□□□□□ -1.79
SYNGAP1-220ENST00000637194 VASH1Q7L8A9 365 aaPredicted RBP3.84□□□□□ -1.79
SYNGAP1-220ENST00000637194 MEIOBQ8N635 442 aa3.84□□□□□ -1.79
SYNGAP1-220ENST00000637194 PURBQ96QR8 312 aaKnown RBP3.84□□□□□ -1.79
SYNGAP1-220ENST00000637194 FAM117AQ9C073 453 aa3.84□□□□□ -1.79
SYNGAP1-220ENST00000637194 ZFAND3Q9H8U3 227 aa3.84□□□□□ -1.79
SYNGAP1-220ENST00000637194 FKBPLQ9UIM3 349 aa3.84□□□□□ -1.79
SYNGAP1-220ENST00000637194 GPSM3Q9Y4H4 160 aa3.84□□□□□ -1.79
SYNGAP1-220ENST00000637194 EMILIN1Q9Y6C2 1016 aa3.84□□□□□ -1.79
SYNGAP1-220ENST00000637194 MAGEB6P1A0A0J9YX57 407 aa3.83□□□□□ -1.8
SYNGAP1-220ENST00000637194 UPP2O95045 317 aa3.83□□□□□ -1.8
SYNGAP1-220ENST00000637194 VSIG8P0DPA2 414 aa3.83□□□□□ -1.8
SYNGAP1-220ENST00000637194 FSHRP23945 695 aa3.83□□□□□ -1.8
SYNGAP1-220ENST00000637194 CCDC116Q8IYX3 515 aa3.83□□□□□ -1.8
SYNGAP1-220ENST00000637194 PROCA1Q8NCQ7 364 aaPredicted RBP3.83□□□□□ -1.8
SYNGAP1-220ENST00000637194 PNMA1Q8ND90 353 aa3.83□□□□□ -1.8
SYNGAP1-220ENST00000637194 ARHGAP9Q9BRR9 750 aa3.83□□□□□ -1.8
SYNGAP1-220ENST00000637194 GPBP1L1Q9HC44 474 aaPredicted RBP3.83□□□□□ -1.8
SYNGAP1-220ENST00000637194 GOPCQ9HD26 462 aa3.83□□□□□ -1.8
SYNGAP1-220ENST00000637194 PTK2Q05397 1052 aa3.82□□□□□ -1.8
SYNGAP1-220ENST00000637194 NR6A1Q15406 480 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms