RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 RBM25P49756 843 aaKnown RBP19.53■□□□□ 0.72
CACNA1A-235ENST00000637004 SMC5Q8IY18 1101 aa19.53■□□□□ 0.72
CACNA1A-235ENST00000637004 TNPO1Q92973 898 aaKnown RBP19.52■□□□□ 0.71
CACNA1A-235ENST00000637004 CFAP53Q96M91 514 aa19.51■□□□□ 0.71
CACNA1A-235ENST00000637004 DDX19BQ9UMR2 479 aa19.51■□□□□ 0.71
CACNA1A-235ENST00000637004 SHPRHQ149N8 1683 aa19.5■□□□□ 0.71
CACNA1A-235ENST00000637004 SBNO2Q9Y2G9 1366 aa19.5■□□□□ 0.71
CACNA1A-235ENST00000637004 HSP90AB1P08238 724 aaKnown RBP19.49■□□□□ 0.71
CACNA1A-235ENST00000637004 CLTCL1P53675 1640 aa19.49■□□□□ 0.71
CACNA1A-235ENST00000637004 RAB3GAP1Q15042 981 aa19.48■□□□□ 0.71
CACNA1A-235ENST00000637004 CFAP70Q5T0N1 1121 aa19.48■□□□□ 0.71
CACNA1A-235ENST00000637004 FBXO31Q5XUX0 539 aaPredicted RBP19.48■□□□□ 0.71
CACNA1A-235ENST00000637004 NSD3Q9BZ95 1437 aa19.48■□□□□ 0.71
CACNA1A-235ENST00000637004 GAS2L3Q86XJ1 694 aa19.47■□□□□ 0.71
CACNA1A-235ENST00000637004 CCDC173Q0VFZ6 552 aa19.47■□□□□ 0.71
CACNA1A-235ENST00000637004 TNNT2P45379 298 aaPredicted RBP19.47■□□□□ 0.71
CACNA1A-235ENST00000637004 PDCL3Q9H2J4 239 aa19.46■□□□□ 0.71
CACNA1A-235ENST00000637004 SMC4Q9NTJ3 1288 aa19.46■□□□□ 0.71
CACNA1A-235ENST00000637004 NEURL4Q96JN8 1562 aa19.46■□□□□ 0.71
CACNA1A-235ENST00000637004 ANP32BQ92688 251 aaKnown RBP19.46■□□□□ 0.71
CACNA1A-235ENST00000637004 ITPRIPQ8IWB1 547 aa19.45■□□□□ 0.7
CACNA1A-235ENST00000637004 MYOM2P54296 1465 aa19.45■□□□□ 0.7
CACNA1A-235ENST00000637004 TRIM27P14373 513 aa19.44■□□□□ 0.7
CACNA1A-235ENST00000637004 MTHFSP49914 203 aa19.44■□□□□ 0.7
CACNA1A-235ENST00000637004 GOLGA6L22H0YM25 854 aa19.44■□□□□ 0.7
CACNA1A-235ENST00000637004 SENP3Q9H4L4 574 aaPredicted RBP19.43■□□□□ 0.7
CACNA1A-235ENST00000637004 ATF7IPQ6VMQ6 1270 aa19.43■□□□□ 0.7
CACNA1A-235ENST00000637004 PPP1R9BQ96SB3 815 aa19.43■□□□□ 0.7
CACNA1A-235ENST00000637004 ZSCAN30Q86W11 494 aa19.42■□□□□ 0.7
CACNA1A-235ENST00000637004 NUCB1Q02818 461 aa19.41■□□□□ 0.7
CACNA1A-235ENST00000637004 NASPP49321 788 aaPredicted RBP19.41■□□□□ 0.7
CACNA1A-235ENST00000637004 KIAA1211Q6ZU35 1233 aa19.4■□□□□ 0.7
CACNA1A-235ENST00000637004 IBTKQ9P2D0 1353 aaPredicted RBP19.4■□□□□ 0.7
CACNA1A-235ENST00000637004 ADGRF5Q8IZF2 1346 aa19.4■□□□□ 0.7
CACNA1A-235ENST00000637004 U2AF1L5P0DN76 240 aaPredicted RBP19.4■□□□□ 0.7
CACNA1A-235ENST00000637004 U2AF1Q01081 240 aaKnown RBP eCLIP19.4■□□□□ 0.7
CACNA1A-235ENST00000637004 MYO3AQ8NEV4 1616 aa19.4■□□□□ 0.7
CACNA1A-235ENST00000637004 TET3O43151 1660 aa19.39■□□□□ 0.69
CACNA1A-235ENST00000637004 BMP2KLQ5H9B9 411 aa19.39■□□□□ 0.69
CACNA1A-235ENST00000637004 ZBTB40Q9NUA8 1239 aa19.39■□□□□ 0.69
CACNA1A-235ENST00000637004 CFAP65Q6ZU64 1925 aaKnown RBP19.39■□□□□ 0.69
CACNA1A-235ENST00000637004 TERF1P54274 439 aa19.38■□□□□ 0.69
CACNA1A-235ENST00000637004 EXOSC9Q06265 439 aaKnown RBP19.38■□□□□ 0.69
CACNA1A-235ENST00000637004 SSH1Q8WYL5 1049 aa19.38■□□□□ 0.69
CACNA1A-235ENST00000637004 K7ELQ4 463 aaPredicted RBP19.38■□□□□ 0.69
CACNA1A-235ENST00000637004 IPO8O15397 1037 aaKnown RBP19.38■□□□□ 0.69
CACNA1A-235ENST00000637004 SLC12A5Q9H2X9 1139 aa19.38■□□□□ 0.69
CACNA1A-235ENST00000637004 OFD1O75665 1012 aa19.38■□□□□ 0.69
CACNA1A-235ENST00000637004 MSNP26038 577 aaKnown RBP19.38■□□□□ 0.69
CACNA1A-235ENST00000637004 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.38■□□□□ 0.69
CACNA1A-235ENST00000637004 CLEC17AQ6ZS10 378 aa19.38■□□□□ 0.69
CACNA1A-235ENST00000637004 TSR2Q969E8 191 aaKnown RBP19.38■□□□□ 0.69
CACNA1A-235ENST00000637004 KIF16BQ96L93 1317 aa19.37■□□□□ 0.69
CACNA1A-235ENST00000637004 KLHL40Q2TBA0 621 aa19.37■□□□□ 0.69
CACNA1A-235ENST00000637004 CHD1LQ86WJ1 897 aa19.37■□□□□ 0.69
CACNA1A-235ENST00000637004 TMEM57Q8N5G2 664 aa19.36■□□□□ 0.69
CACNA1A-235ENST00000637004 LNPKQ9C0E8 428 aa19.36■□□□□ 0.69
CACNA1A-235ENST00000637004 NOB1Q9ULX3 412 aaKnown RBP19.36■□□□□ 0.69
CACNA1A-235ENST00000637004 ADGRB2O60241 1585 aa19.35■□□□□ 0.69
CACNA1A-235ENST00000637004 USP32Q8NFA0 1604 aa19.35■□□□□ 0.69
CACNA1A-235ENST00000637004 KIF2CQ99661 725 aa19.35■□□□□ 0.69
CACNA1A-235ENST00000637004 ABCC11Q96J66 1382 aa19.35■□□□□ 0.69
CACNA1A-235ENST00000637004 DEPDC5O75140 1603 aa19.34■□□□□ 0.69
CACNA1A-235ENST00000637004 HS1BP3Q53T59 392 aa19.34■□□□□ 0.69
CACNA1A-235ENST00000637004 DDX49Q9Y6V7 483 aaKnown RBP19.34■□□□□ 0.69
CACNA1A-235ENST00000637004 IL16Q14005 1332 aa19.34■□□□□ 0.69
CACNA1A-235ENST00000637004 NSD2O96028 1365 aa19.34■□□□□ 0.69
CACNA1A-235ENST00000637004 AGLP35573 1532 aa19.33■□□□□ 0.68
CACNA1A-235ENST00000637004 NOS1P29475 1434 aa19.32■□□□□ 0.68
CACNA1A-235ENST00000637004 MAP7D2Q96T17 732 aa19.32■□□□□ 0.68
CACNA1A-235ENST00000637004 NRXN1Q9ULB1 1477 aa19.32■□□□□ 0.68
CACNA1A-235ENST00000637004 CHGAP10645 457 aaKnown RBP19.31■□□□□ 0.68
CACNA1A-235ENST00000637004 MROH1Q8NDA8 1641 aa19.31■□□□□ 0.68
CACNA1A-235ENST00000637004 SSFA2P28290 1259 aa19.31■□□□□ 0.68
CACNA1A-235ENST00000637004 TMPOP42166 694 aaKnown RBP19.31■□□□□ 0.68
CACNA1A-235ENST00000637004 CHMP4BQ9H444 224 aaKnown RBP19.31■□□□□ 0.68
CACNA1A-235ENST00000637004 FOXD4L1Q9NU39 408 aa19.31■□□□□ 0.68
CACNA1A-235ENST00000637004 A0A0U1RQG5 324 aaPredicted RBP19.3■□□□□ 0.68
CACNA1A-235ENST00000637004 GCC1Q96CN9 775 aa19.3■□□□□ 0.68
CACNA1A-235ENST00000637004 SETBP1Q9Y6X0 1596 aa19.3■□□□□ 0.68
CACNA1A-235ENST00000637004 BAG4O95429 457 aaKnown RBP19.3■□□□□ 0.68
CACNA1A-235ENST00000637004 ZNF445P59923 1031 aa19.3■□□□□ 0.68
CACNA1A-235ENST00000637004 VWDEQ8N2E2 1590 aa19.3■□□□□ 0.68
CACNA1A-235ENST00000637004 CD2BP2O95400 341 aaKnown RBP19.29■□□□□ 0.68
CACNA1A-235ENST00000637004 FGD1P98174 961 aa19.29■□□□□ 0.68
CACNA1A-235ENST00000637004 TRAK1Q9UPV9 953 aa19.29■□□□□ 0.68
CACNA1A-235ENST00000637004 REREQ9P2R6 1566 aa19.29■□□□□ 0.68
CACNA1A-235ENST00000637004 CLTCQ00610 1675 aaKnown RBP19.29■□□□□ 0.68
CACNA1A-235ENST00000637004 RIMS1Q86UR5 1692 aaKnown RBP19.28■□□□□ 0.68
CACNA1A-235ENST00000637004 ARHGAP31Q2M1Z3 1444 aa19.28■□□□□ 0.68
CACNA1A-235ENST00000637004 ALDH1L2Q3SY69 923 aa19.28■□□□□ 0.68
CACNA1A-235ENST00000637004 GAS2L2Q8NHY3 880 aa19.28■□□□□ 0.68
CACNA1A-235ENST00000637004 PUS7Q96PZ0 661 aaKnown RBP19.28■□□□□ 0.68
CACNA1A-235ENST00000637004 TRIM35Q9UPQ4 493 aa19.28■□□□□ 0.68
CACNA1A-235ENST00000637004 AEBP2Q6ZN18 517 aaPredicted RBP19.28■□□□□ 0.68
CACNA1A-235ENST00000637004 TBC1D9Q6ZT07 1266 aa19.28■□□□□ 0.68
CACNA1A-235ENST00000637004 CALD1Q05682 793 aaKnown RBP19.27■□□□□ 0.68
CACNA1A-235ENST00000637004 PLEKHF1Q96S99 279 aa19.27■□□□□ 0.68
CACNA1A-235ENST00000637004 ABCC3O15438 1527 aa19.27■□□□□ 0.68
CACNA1A-235ENST00000637004 PTPRMP28827 1452 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms