RNA–Protein interactions for RNA: ENST00000636945.2

SCN8A-212, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 3,578 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-212ENST00000636945 PPRC1Q5VV67 1664 aaKnown RBP9.7□□□□□ -0.86
SCN8A-212ENST00000636945 ZC3H13Q5T200 1668 aaKnown RBP9.69□□□□□ -0.86
SCN8A-212ENST00000636945 NOS1P29475 1434 aa9.69□□□□□ -0.86
SCN8A-212ENST00000636945 CANXP27824 592 aaKnown RBP9.69□□□□□ -0.86
SCN8A-212ENST00000636945 EFCAB2Q5VUJ9 269 aa9.69□□□□□ -0.86
SCN8A-212ENST00000636945 IFT172Q9UG01 1749 aa9.69□□□□□ -0.86
SCN8A-212ENST00000636945 MYOM2P54296 1465 aa9.69□□□□□ -0.86
SCN8A-212ENST00000636945 DEPDC5O75140 1603 aa9.69□□□□□ -0.86
SCN8A-212ENST00000636945 SLC24A1O60721 1099 aa9.69□□□□□ -0.86
SCN8A-212ENST00000636945 RBM10P98175 930 aaKnown RBP9.69□□□□□ -0.86
SCN8A-212ENST00000636945 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.68□□□□□ -0.86
SCN8A-212ENST00000636945 NUCB1Q02818 461 aa9.68□□□□□ -0.86
SCN8A-212ENST00000636945 CD2BP2O95400 341 aaKnown RBP9.68□□□□□ -0.86
SCN8A-212ENST00000636945 HSP90AB1P08238 724 aaKnown RBP9.68□□□□□ -0.86
SCN8A-212ENST00000636945 KIF16BQ96L93 1317 aa9.68□□□□□ -0.86
SCN8A-212ENST00000636945 MED14O60244 1454 aa9.68□□□□□ -0.86
SCN8A-212ENST00000636945 NEO1Q92859 1461 aa9.68□□□□□ -0.86
SCN8A-212ENST00000636945 NRXN1Q9ULB1 1477 aa9.67□□□□□ -0.86
SCN8A-212ENST00000636945 BMP2KLQ5H9B9 411 aa9.67□□□□□ -0.86
SCN8A-212ENST00000636945 PLCH2O75038 1416 aa9.67□□□□□ -0.86
SCN8A-212ENST00000636945 K7ELQ4 463 aaPredicted RBP9.67□□□□□ -0.86
SCN8A-212ENST00000636945 BAG4O95429 457 aaKnown RBP9.67□□□□□ -0.86
SCN8A-212ENST00000636945 MSNP26038 577 aaKnown RBP9.67□□□□□ -0.86
SCN8A-212ENST00000636945 ZKSCAN2Q63HK3 967 aa9.67□□□□□ -0.86
SCN8A-212ENST00000636945 DZIP1LQ8IYY4 767 aaKnown RBP9.67□□□□□ -0.86
SCN8A-212ENST00000636945 ZKSCAN5Q9Y2L8 839 aa9.67□□□□□ -0.86
SCN8A-212ENST00000636945 DMTNQ08495 405 aa9.67□□□□□ -0.86
SCN8A-212ENST00000636945 TCP11L2Q8N4U5 519 aa9.67□□□□□ -0.86
SCN8A-212ENST00000636945 ZBTB40Q9NUA8 1239 aa9.67□□□□□ -0.86
SCN8A-212ENST00000636945 VWDEQ8N2E2 1590 aa9.66□□□□□ -0.86
SCN8A-212ENST00000636945 FANCAO15360 1455 aa9.66□□□□□ -0.86
SCN8A-212ENST00000636945 PLEKHG5O94827 1062 aa9.66□□□□□ -0.86
SCN8A-212ENST00000636945 RAPGEF3O95398 923 aa9.66□□□□□ -0.86
SCN8A-212ENST00000636945 CSPP1Q1MSJ5 1256 aa9.66□□□□□ -0.86
SCN8A-212ENST00000636945 ARAP3Q8WWN8 1544 aa9.65□□□□□ -0.86
SCN8A-212ENST00000636945 UQCRHLA0A096LP55 91 aa9.65□□□□□ -0.86
SCN8A-212ENST00000636945 UQCRHP07919 91 aa9.65□□□□□ -0.86
SCN8A-212ENST00000636945 ZSCAN20P17040 1043 aaPredicted RBP9.65□□□□□ -0.86
SCN8A-212ENST00000636945 SSFA2P28290 1259 aa9.65□□□□□ -0.86
SCN8A-212ENST00000636945 LMBRD1Q9NUN5 540 aa9.65□□□□□ -0.86
SCN8A-212ENST00000636945 SETBP1Q9Y6X0 1596 aa9.65□□□□□ -0.86
SCN8A-212ENST00000636945 RBSNQ9H1K0 784 aa9.65□□□□□ -0.87
SCN8A-212ENST00000636945 DDX19BQ9UMR2 479 aa9.65□□□□□ -0.87
SCN8A-212ENST00000636945 R3HCC1Q9Y3T6 440 aaKnown RBP9.65□□□□□ -0.87
SCN8A-212ENST00000636945 TRIM27P14373 513 aa9.64□□□□□ -0.87
SCN8A-212ENST00000636945 ZSCAN23Q3MJ62 389 aa9.64□□□□□ -0.87
SCN8A-212ENST00000636945 SASS6Q6UVJ0 657 aa9.64□□□□□ -0.87
SCN8A-212ENST00000636945 GAS2L2Q8NHY3 880 aa9.64□□□□□ -0.87
SCN8A-212ENST00000636945 TET3O43151 1660 aa9.64□□□□□ -0.87
SCN8A-212ENST00000636945 GTF2F1P35269 517 aaKnown RBP eCLIP9.64□□□□□ -0.87
SCN8A-212ENST00000636945 CCDC94Q9BW85 323 aaPredicted RBP9.64□□□□□ -0.87
SCN8A-212ENST00000636945 FAM13BQ9NYF5 915 aa9.63□□□□□ -0.87
SCN8A-212ENST00000636945 ANP32BQ92688 251 aaKnown RBP9.63□□□□□ -0.87
SCN8A-212ENST00000636945 ABCC11Q96J66 1382 aa9.62□□□□□ -0.87
SCN8A-212ENST00000636945 PIK3R4Q99570 1358 aa9.62□□□□□ -0.87
SCN8A-212ENST00000636945 GOLGA6L22H0YM25 854 aa9.62□□□□□ -0.87
SCN8A-212ENST00000636945 BRPF1P55201 1214 aaPredicted RBP9.62□□□□□ -0.87
SCN8A-212ENST00000636945 BCL2L13Q9BXK5 485 aa9.62□□□□□ -0.87
SCN8A-212ENST00000636945 DDX49Q9Y6V7 483 aaKnown RBP9.62□□□□□ -0.87
SCN8A-212ENST00000636945 ARHGAP5Q13017 1502 aa9.62□□□□□ -0.87
SCN8A-212ENST00000636945 XPCQ01831 940 aaPredicted RBP9.62□□□□□ -0.87
SCN8A-212ENST00000636945 ATF7IPQ6VMQ6 1270 aa9.62□□□□□ -0.87
SCN8A-212ENST00000636945 CHD1LQ86WJ1 897 aa9.62□□□□□ -0.87
SCN8A-212ENST00000636945 IL16Q14005 1332 aa9.61□□□□□ -0.87
SCN8A-212ENST00000636945 COL3A1P02461 1466 aaPredicted RBP9.61□□□□□ -0.87
SCN8A-212ENST00000636945 MYRIPQ8NFW9 859 aa9.61□□□□□ -0.87
SCN8A-212ENST00000636945 PRIM1P49642 420 aaKnown RBP9.6□□□□□ -0.87
SCN8A-212ENST00000636945 FGD1P98174 961 aa9.6□□□□□ -0.87
SCN8A-212ENST00000636945 NSD3Q9BZ95 1437 aa9.6□□□□□ -0.87
SCN8A-212ENST00000636945 PPIP5K1Q6PFW1 1433 aa9.6□□□□□ -0.87
SCN8A-212ENST00000636945 TRAPPC8Q9Y2L5 1435 aa9.6□□□□□ -0.87
SCN8A-212ENST00000636945 NUCB2P80303 420 aa9.6□□□□□ -0.87
SCN8A-212ENST00000636945 AEBP2Q6ZN18 517 aaPredicted RBP9.6□□□□□ -0.87
SCN8A-212ENST00000636945 CCDC39Q9UFE4 941 aa9.6□□□□□ -0.87
SCN8A-212ENST00000636945 LRSAM1Q6UWE0 723 aa9.59□□□□□ -0.87
SCN8A-212ENST00000636945 TBC1D9Q6ZT07 1266 aa9.59□□□□□ -0.87
SCN8A-212ENST00000636945 FTSJ3Q8IY81 847 aaKnown RBP9.59□□□□□ -0.87
SCN8A-212ENST00000636945 ZNF710Q8N1W2 664 aa9.59□□□□□ -0.87
SCN8A-212ENST00000636945 GPT2Q8TD30 523 aa9.59□□□□□ -0.87
SCN8A-212ENST00000636945 PLEKHF1Q96S99 279 aa9.59□□□□□ -0.87
SCN8A-212ENST00000636945 RRP7AQ9Y3A4 280 aaKnown RBP9.59□□□□□ -0.87
SCN8A-212ENST00000636945 SSH1Q8WYL5 1049 aa9.59□□□□□ -0.87
SCN8A-212ENST00000636945 GTPBP4Q9BZE4 634 aaKnown RBP9.59□□□□□ -0.87
SCN8A-212ENST00000636945 RBM42Q9BTD8 480 aaKnown RBP9.59□□□□□ -0.87
SCN8A-212ENST00000636945 ABCC1P33527 1531 aa9.59□□□□□ -0.87
SCN8A-212ENST00000636945 NSD2O96028 1365 aa9.58□□□□□ -0.88
SCN8A-212ENST00000636945 TMEM57Q8N5G2 664 aa9.58□□□□□ -0.88
SCN8A-212ENST00000636945 QRICH2Q9H0J4 1663 aa9.58□□□□□ -0.88
SCN8A-212ENST00000636945 KIF20AO95235 890 aa9.58□□□□□ -0.88
SCN8A-212ENST00000636945 AFAP1Q8N556 730 aa9.58□□□□□ -0.88
SCN8A-212ENST00000636945 CWC22Q9HCG8 908 aaKnown RBP9.58□□□□□ -0.88
SCN8A-212ENST00000636945 ZDHHC9Q9Y397 364 aa9.58□□□□□ -0.88
SCN8A-212ENST00000636945 HMGN5P82970 282 aaKnown RBP9.58□□□□□ -0.88
SCN8A-212ENST00000636945 GCC1Q96CN9 775 aa9.58□□□□□ -0.88
SCN8A-212ENST00000636945 PRIMPOLQ96LW4 560 aa9.58□□□□□ -0.88
SCN8A-212ENST00000636945 ADGRB1O14514 1584 aa9.57□□□□□ -0.88
SCN8A-212ENST00000636945 RABEP1Q15276 862 aa9.57□□□□□ -0.88
SCN8A-212ENST00000636945 CAVIN1Q6NZI2 390 aaKnown RBP9.57□□□□□ -0.88
SCN8A-212ENST00000636945 TRIM35Q9UPQ4 493 aa9.57□□□□□ -0.88
SCN8A-212ENST00000636945 PTCH1Q13635 1447 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms