RNA–Protein interactions for RNA: ENST00000636845.1

RYR3-223, Transcript of ryanodine receptor 3, human

TSL 5

Gene RYR3, Length 2,973 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RYR3-223	ENST00000636845	KIF16B	Q96L93	1317 aa		6.61	□□□□□ -1.35
RYR3-223	ENST00000636845	VGLL3	A8MV65	326 aa		6.6	□□□□□ -1.35
RYR3-223	ENST00000636845	JARID2	Q92833	1246 aa	Predicted RBP	6.6	□□□□□ -1.35
RYR3-223	ENST00000636845	RBM27	Q9P2N5	1060 aa	Known RBP	6.6	□□□□□ -1.35
RYR3-223	ENST00000636845	CLASP1	Q7Z460	1538 aa		6.6	□□□□□ -1.35
RYR3-223	ENST00000636845	PIK3C2G	O75747	1445 aa		6.6	□□□□□ -1.35
RYR3-223	ENST00000636845	CHAF1A	Q13111	956 aa	Predicted RBP	6.6	□□□□□ -1.35
RYR3-223	ENST00000636845	CLEC17A	Q6ZS10	378 aa		6.6	□□□□□ -1.35
RYR3-223	ENST00000636845	MTMR7	Q9Y216	660 aa		6.6	□□□□□ -1.35
RYR3-223	ENST00000636845	FANCD2	Q9BXW9	1451 aa		6.6	□□□□□ -1.35
RYR3-223	ENST00000636845	FAM177B	A6PVY3	158 aa		6.6	□□□□□ -1.35
RYR3-223	ENST00000636845	ATP2B3	Q16720	1220 aa		6.6	□□□□□ -1.35
RYR3-223	ENST00000636845	LRSAM1	Q6UWE0	723 aa		6.6	□□□□□ -1.35
RYR3-223	ENST00000636845	MPND	Q8N594	471 aa		6.6	□□□□□ -1.35
RYR3-223	ENST00000636845	IPO4	Q8TEX9	1081 aa	Known RBP	6.6	□□□□□ -1.35
RYR3-223	ENST00000636845	SMC4	Q9NTJ3	1288 aa		6.6	□□□□□ -1.35
RYR3-223	ENST00000636845	LMBRD1	Q9NUN5	540 aa		6.6	□□□□□ -1.35
RYR3-223	ENST00000636845	DDX19B	Q9UMR2	479 aa		6.6	□□□□□ -1.35
RYR3-223	ENST00000636845	HDAC1	Q13547	482 aa	Predicted RBP	6.59	□□□□□ -1.35
RYR3-223	ENST00000636845	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	6.59	□□□□□ -1.35
RYR3-223	ENST00000636845	GPRASP1	Q5JY77	1395 aa		6.59	□□□□□ -1.35
RYR3-223	ENST00000636845	RAD21	O60216	631 aa		6.59	□□□□□ -1.35
RYR3-223	ENST00000636845	BRD2	P25440	801 aa	Known RBP	6.59	□□□□□ -1.35
RYR3-223	ENST00000636845	ZNF710	Q8N1W2	664 aa		6.59	□□□□□ -1.35
RYR3-223	ENST00000636845	TMEM51	Q9NW97	253 aa		6.59	□□□□□ -1.35
RYR3-223	ENST00000636845	MAGI2	Q86UL8	1455 aa		6.59	□□□□□ -1.36
RYR3-223	ENST00000636845	NOLC1	Q14978	699 aa	Known RBP eCLIP	6.58	□□□□□ -1.36
RYR3-223	ENST00000636845	PLCD3	Q8N3E9	789 aa		6.58	□□□□□ -1.36
RYR3-223	ENST00000636845	TCP11L2	Q8N4U5	519 aa		6.58	□□□□□ -1.36
RYR3-223	ENST00000636845	KCTD17	Q8N5Z5	321 aa		6.58	□□□□□ -1.36
RYR3-223	ENST00000636845	RUNDC1	Q96C34	613 aa		6.58	□□□□□ -1.36
RYR3-223	ENST00000636845	ABCC2	Q92887	1545 aa		6.58	□□□□□ -1.36
RYR3-223	ENST00000636845	BMP2KL	Q5H9B9	411 aa		6.57	□□□□□ -1.36
RYR3-223	ENST00000636845	TAF7L	Q5H9L4	462 aa		6.57	□□□□□ -1.36
RYR3-223	ENST00000636845	KIF2C	Q99661	725 aa		6.57	□□□□□ -1.36
RYR3-223	ENST00000636845	TSPY26P	Q9H489	355 aa		6.57	□□□□□ -1.36
RYR3-223	ENST00000636845	DIAPH3	Q9NSV4	1193 aa		6.57	□□□□□ -1.36
RYR3-223	ENST00000636845	ATF5	Q9Y2D1	282 aa	Predicted RBP	6.57	□□□□□ -1.36
RYR3-223	ENST00000636845	MBD3	O95983	291 aa		6.57	□□□□□ -1.36
RYR3-223	ENST00000636845	HSP90B1	P14625	803 aa	Known RBP	6.57	□□□□□ -1.36
RYR3-223	ENST00000636845	U2AF2	P26368	475 aa	Known RBP eCLIP	6.57	□□□□□ -1.36
RYR3-223	ENST00000636845	ANKRD45	Q5TZF3	282 aa		6.57	□□□□□ -1.36
RYR3-223	ENST00000636845	CHD1L	Q86WJ1	897 aa		6.57	□□□□□ -1.36
RYR3-223	ENST00000636845	WDR63	Q8IWG1	891 aa		6.57	□□□□□ -1.36
RYR3-223	ENST00000636845	PIBF1	Q8WXW3	757 aa		6.57	□□□□□ -1.36
RYR3-223	ENST00000636845	SYAP1	Q96A49	352 aa	Predicted RBP	6.57	□□□□□ -1.36
RYR3-223	ENST00000636845	ZNF830	Q96NB3	372 aa	Predicted RBP	6.57	□□□□□ -1.36
RYR3-223	ENST00000636845	BCL2L12	Q9HB09	334 aa		6.57	□□□□□ -1.36
RYR3-223	ENST00000636845	TMEM63C	Q9P1W3	806 aa		6.57	□□□□□ -1.36
RYR3-223	ENST00000636845	ASXL1	Q8IXJ9	1541 aa		6.57	□□□□□ -1.36
RYR3-223	ENST00000636845	RABEP1	Q15276	862 aa		6.57	□□□□□ -1.36
RYR3-223	ENST00000636845	GPT2	Q8TD30	523 aa		6.57	□□□□□ -1.36
RYR3-223	ENST00000636845	ADGRL2	O95490	1459 aa		6.56	□□□□□ -1.36
RYR3-223	ENST00000636845	TOPBP1	Q92547	1522 aa		6.56	□□□□□ -1.36
RYR3-223	ENST00000636845	TRIM27	P14373	513 aa		6.56	□□□□□ -1.36
RYR3-223	ENST00000636845	GTF2F1	P35269	517 aa	Known RBP eCLIP	6.56	□□□□□ -1.36
RYR3-223	ENST00000636845	NUCB1	Q02818	461 aa		6.56	□□□□□ -1.36
RYR3-223	ENST00000636845	TBC1D9	Q6ZT07	1266 aa		6.56	□□□□□ -1.36
RYR3-223	ENST00000636845	CWC22	Q9HCG8	908 aa	Known RBP	6.56	□□□□□ -1.36
RYR3-223	ENST00000636845	DNMBP	Q6XZF7	1577 aa		6.56	□□□□□ -1.36
RYR3-223	ENST00000636845	PKP1	Q13835	747 aa		6.56	□□□□□ -1.36
RYR3-223	ENST00000636845	TTC12	Q9H892	705 aa	Predicted RBP	6.56	□□□□□ -1.36
RYR3-223	ENST00000636845	WDR7	Q9Y4E6	1490 aa		6.56	□□□□□ -1.36
RYR3-223	ENST00000636845	FAM135A	Q9P2D6	1515 aa		6.55	□□□□□ -1.36
RYR3-223	ENST00000636845	CCDC66	A2RUB6	948 aa		6.55	□□□□□ -1.36
RYR3-223	ENST00000636845	APBB1	O00213	710 aa		6.55	□□□□□ -1.36
RYR3-223	ENST00000636845	ST18	O60284	1047 aa		6.55	□□□□□ -1.36
RYR3-223	ENST00000636845	PHF14	O94880	888 aa		6.55	□□□□□ -1.36
RYR3-223	ENST00000636845	KCNJ4	P48050	445 aa		6.55	□□□□□ -1.36
RYR3-223	ENST00000636845	ATF7IP	Q6VMQ6	1270 aa		6.55	□□□□□ -1.36
RYR3-223	ENST00000636845	C17orf53	Q8N3J3	647 aa	Predicted RBP	6.55	□□□□□ -1.36
RYR3-223	ENST00000636845	KDM5D	Q9BY66	1539 aa		6.55	□□□□□ -1.36
RYR3-223	ENST00000636845	C9orf84	Q5VXU9	1444 aa		6.55	□□□□□ -1.36
RYR3-223	ENST00000636845	PRG4	Q92954	1404 aa	Predicted RBP	6.55	□□□□□ -1.36
RYR3-223	ENST00000636845	CDC45	O75419	566 aa		6.55	□□□□□ -1.36
RYR3-223	ENST00000636845	FEZ1	Q99689	392 aa		6.55	□□□□□ -1.36
RYR3-223	ENST00000636845	WDR62	O43379	1518 aa		6.55	□□□□□ -1.36
RYR3-223	ENST00000636845	MORC1	Q86VD1	984 aa		6.54	□□□□□ -1.36
RYR3-223	ENST00000636845	USP25	Q9UHP3	1055 aa		6.54	□□□□□ -1.36
RYR3-223	ENST00000636845	TRPM1	Q7Z4N2	1603 aa		6.54	□□□□□ -1.36
RYR3-223	ENST00000636845	PLXNC1	O60486	1568 aa		6.54	□□□□□ -1.36
RYR3-223	ENST00000636845	CEP170	Q5SW79	1584 aa		6.54	□□□□□ -1.36
RYR3-223	ENST00000636845	PRDM2	Q13029	1718 aa		6.54	□□□□□ -1.36
RYR3-223	ENST00000636845	NPC1L1	Q9UHC9	1359 aa		6.54	□□□□□ -1.36
RYR3-223	ENST00000636845	IPO8	O15397	1037 aa	Known RBP	6.54	□□□□□ -1.36
RYR3-223	ENST00000636845	TMEM57	Q8N5G2	664 aa		6.54	□□□□□ -1.36
RYR3-223	ENST00000636845	PRDM15	P57071	1507 aa	Predicted RBP	6.54	□□□□□ -1.36
RYR3-223	ENST00000636845	SPDYE2B	A6NHP3	402 aa		6.54	□□□□□ -1.36
RYR3-223	ENST00000636845	SPDYE6	P0CI01	402 aa		6.54	□□□□□ -1.36
RYR3-223	ENST00000636845	CLCN6	P51797	869 aa		6.54	□□□□□ -1.36
RYR3-223	ENST00000636845	FKBP5	Q13451	457 aa	Predicted RBP	6.54	□□□□□ -1.36
RYR3-223	ENST00000636845	SPDYE2	Q495Y8	402 aa		6.54	□□□□□ -1.36
RYR3-223	ENST00000636845	ZGPAT	Q8N5A5	531 aa	Known RBP	6.54	□□□□□ -1.36
RYR3-223	ENST00000636845	FAM184A	Q8NB25	1140 aa		6.54	□□□□□ -1.36
RYR3-223	ENST00000636845	TSR2	Q969E8	191 aa	Known RBP	6.54	□□□□□ -1.36
RYR3-223	ENST00000636845	CFAP53	Q96M91	514 aa		6.54	□□□□□ -1.36
RYR3-223	ENST00000636845	OGFR	Q9NZT2	677 aa		6.54	□□□□□ -1.36
RYR3-223	ENST00000636845	A2M	P01023	1474 aa		6.53	□□□□□ -1.36
RYR3-223	ENST00000636845	TRO	Q12816	1431 aa	Predicted RBP	6.53	□□□□□ -1.36
RYR3-223	ENST00000636845	ECM2	O94769	699 aa	Predicted RBP	6.53	□□□□□ -1.36

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