RNA–Protein interactions for RNA: ENST00000636767.1

CLN5-215, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,368 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-215ENST00000636767 ITPRIPQ8IWB1 547 aa27.3■■□□□ 1.96
CLN5-215ENST00000636767 SPRYD3Q8NCJ5 442 aa27.3■■□□□ 1.96
CLN5-215ENST00000636767 ATF7IPQ6VMQ6 1270 aa27.3■■□□□ 1.96
CLN5-215ENST00000636767 PRKCSHP14314 528 aaPredicted RBP27.28■■□□□ 1.96
CLN5-215ENST00000636767 VGFO15240 615 aaPredicted RBP27.28■■□□□ 1.96
CLN5-215ENST00000636767 CFAP74Q9C0B2 1584 aa27.27■■□□□ 1.96
CLN5-215ENST00000636767 ANKRD26Q9UPS8 1709 aa27.27■■□□□ 1.96
CLN5-215ENST00000636767 SMC5Q8IY18 1101 aa27.27■■□□□ 1.96
CLN5-215ENST00000636767 MCM4P33991 863 aa27.27■■□□□ 1.96
CLN5-215ENST00000636767 SAFB2Q14151 953 aaKnown RBP eCLIP27.27■■□□□ 1.96
CLN5-215ENST00000636767 GGNBP2Q9H3C7 697 aa27.27■■□□□ 1.96
CLN5-215ENST00000636767 NOB1Q9ULX3 412 aaKnown RBP27.26■■□□□ 1.95
CLN5-215ENST00000636767 IL16Q14005 1332 aa27.26■■□□□ 1.95
CLN5-215ENST00000636767 TMEM57Q8N5G2 664 aa27.24■■□□□ 1.95
CLN5-215ENST00000636767 CHMP5Q9NZZ3 219 aa27.23■■□□□ 1.95
CLN5-215ENST00000636767 ZBTB40Q9NUA8 1239 aa27.22■■□□□ 1.95
CLN5-215ENST00000636767 MED14O60244 1454 aa27.21■■□□□ 1.95
CLN5-215ENST00000636767 SRPK2P78362 688 aaKnown RBP27.21■■□□□ 1.95
CLN5-215ENST00000636767 FSD2A1L4K1 749 aa27.2■■□□□ 1.94
CLN5-215ENST00000636767 CD163L1Q9NR16 1453 aa27.19■■□□□ 1.94
CLN5-215ENST00000636767 KIF16BQ96L93 1317 aa27.19■■□□□ 1.94
CLN5-215ENST00000636767 RIPK4P57078 832 aa27.19■■□□□ 1.94
CLN5-215ENST00000636767 FYB1O15117 783 aa27.19■■□□□ 1.94
CLN5-215ENST00000636767 PTPRMP28827 1452 aa27.17■■□□□ 1.94
CLN5-215ENST00000636767 GOLGA6L3A6NEY3 463 aa27.17■■□□□ 1.94
CLN5-215ENST00000636767 RRAGDQ9NQL2 400 aaPredicted RBP27.17■■□□□ 1.94
CLN5-215ENST00000636767 STK26Q9P289 416 aa27.17■■□□□ 1.94
CLN5-215ENST00000636767 CLTCQ00610 1675 aaKnown RBP27.17■■□□□ 1.94
CLN5-215ENST00000636767 ATAD2Q6PL18 1390 aa27.16■■□□□ 1.94
CLN5-215ENST00000636767 ZNF692Q9BU19 519 aaPredicted RBP27.16■■□□□ 1.94
CLN5-215ENST00000636767 ZFYVE9O95405 1425 aa27.16■■□□□ 1.94
CLN5-215ENST00000636767 XRCC6P12956 609 aaKnown RBP eCLIP27.16■■□□□ 1.94
CLN5-215ENST00000636767 HSCBQ8IWL3 235 aa27.16■■□□□ 1.94
CLN5-215ENST00000636767 NCOA3Q9Y6Q9 1424 aa27.16■■□□□ 1.94
CLN5-215ENST00000636767 NUCB1Q02818 461 aa27.15■■□□□ 1.94
CLN5-215ENST00000636767 RSPH6AQ9H0K4 717 aa27.15■■□□□ 1.94
CLN5-215ENST00000636767 IPO8O15397 1037 aaKnown RBP27.14■■□□□ 1.94
CLN5-215ENST00000636767 ARXQ96QS3 562 aa27.14■■□□□ 1.94
CLN5-215ENST00000636767 GZF1Q9H116 711 aaPredicted RBP27.14■■□□□ 1.94
CLN5-215ENST00000636767 PNPLA6Q8IY17 1366 aa27.14■■□□□ 1.94
CLN5-215ENST00000636767 TERF2IPQ9NYB0 399 aa27.14■■□□□ 1.93
CLN5-215ENST00000636767 DIAPH1O60610 1272 aaKnown RBP27.13■■□□□ 1.93
CLN5-215ENST00000636767 MYO5BQ9ULV0 1848 aa27.13■■□□□ 1.93
CLN5-215ENST00000636767 TRAK2O60296 914 aa27.13■■□□□ 1.93
CLN5-215ENST00000636767 RBM25P49756 843 aaKnown RBP27.13■■□□□ 1.93
CLN5-215ENST00000636767 IDI1Q13907 227 aa27.13■■□□□ 1.93
CLN5-215ENST00000636767 LRRC7Q96NW7 1537 aa27.12■■□□□ 1.93
CLN5-215ENST00000636767 ALDH1L2Q3SY69 923 aa27.12■■□□□ 1.93
CLN5-215ENST00000636767 ARHGAP31Q2M1Z3 1444 aa27.11■■□□□ 1.93
CLN5-215ENST00000636767 CDC42BPGQ6DT37 1551 aa27.11■■□□□ 1.93
CLN5-215ENST00000636767 LNPKQ9C0E8 428 aa27.11■■□□□ 1.93
CLN5-215ENST00000636767 SENP3Q9H4L4 574 aaPredicted RBP27.11■■□□□ 1.93
CLN5-215ENST00000636767 MINK1Q8N4C8 1332 aaPredicted RBP27.11■■□□□ 1.93
CLN5-215ENST00000636767 KIF20BQ96Q89 1820 aa27.1■■□□□ 1.93
CLN5-215ENST00000636767 DDIT3P35638 169 aa27.1■■□□□ 1.93
CLN5-215ENST00000636767 EIF5BO60841 1220 aaKnown RBP27.09■■□□□ 1.93
CLN5-215ENST00000636767 DIP2CQ9Y2E4 1556 aa27.09■■□□□ 1.93
CLN5-215ENST00000636767 CHD1LQ86WJ1 897 aa27.09■■□□□ 1.93
CLN5-215ENST00000636767 PNNQ9H307 717 aaKnown RBP27.09■■□□□ 1.93
CLN5-215ENST00000636767 PANK2Q9BZ23 570 aa27.08■■□□□ 1.93
CLN5-215ENST00000636767 SNX21Q969T3 373 aa27.08■■□□□ 1.93
CLN5-215ENST00000636767 PRAM1Q96QH2 718 aa27.08■■□□□ 1.93
CLN5-215ENST00000636767 DDX11L8A8MPP1 907 aa27.06■■□□□ 1.92
CLN5-215ENST00000636767 FAM135BQ49AJ0 1406 aa27.06■■□□□ 1.92
CLN5-215ENST00000636767 PPIP5K1Q6PFW1 1433 aa27.05■■□□□ 1.92
CLN5-215ENST00000636767 YTHDC2Q9H6S0 1430 aaKnown RBP27.05■■□□□ 1.92
CLN5-215ENST00000636767 NPM1P06748 294 aaKnown RBP eCLIP27.05■■□□□ 1.92
CLN5-215ENST00000636767 TMEM131LA2VDJ0 1609 aa27.05■■□□□ 1.92
CLN5-215ENST00000636767 FCHSD2O94868 740 aa27.05■■□□□ 1.92
CLN5-215ENST00000636767 BRPF1P55201 1214 aaPredicted RBP27.05■■□□□ 1.92
CLN5-215ENST00000636767 BMP2KLQ5H9B9 411 aa27.04■■□□□ 1.92
CLN5-215ENST00000636767 HDGFL2Q7Z4V5 671 aaPredicted RBP27.04■■□□□ 1.92
CLN5-215ENST00000636767 RAPGEF3O95398 923 aa27.03■■□□□ 1.92
CLN5-215ENST00000636767 SLC52A1Q9NWF4 448 aa27.03■■□□□ 1.92
CLN5-215ENST00000636767 PRKAR2BP31323 418 aa27.02■■□□□ 1.92
CLN5-215ENST00000636767 ZNF428Q96B54 188 aa27.02■■□□□ 1.92
CLN5-215ENST00000636767 ARHGEF40Q8TER5 1519 aa27.01■■□□□ 1.91
CLN5-215ENST00000636767 PREX1Q8TCU6 1659 aa27■■□□□ 1.91
CLN5-215ENST00000636767 PIK3R4Q99570 1358 aa27■■□□□ 1.91
CLN5-215ENST00000636767 PTCH1Q13635 1447 aa27■■□□□ 1.91
CLN5-215ENST00000636767 ZBTB7BO15156 539 aaPredicted RBP27■■□□□ 1.91
CLN5-215ENST00000636767 MRE11P49959 708 aa27■■□□□ 1.91
CLN5-215ENST00000636767 KIF2CQ99661 725 aa26.99■■□□□ 1.91
CLN5-215ENST00000636767 NEO1Q92859 1461 aa26.98■■□□□ 1.91
CLN5-215ENST00000636767 CDK19Q9BWU1 502 aa26.98■■□□□ 1.91
CLN5-215ENST00000636767 ANKRD45Q5TZF3 282 aa26.98■■□□□ 1.91
CLN5-215ENST00000636767 MRPL50Q8N5N7 158 aaKnown RBP26.98■■□□□ 1.91
CLN5-215ENST00000636767 TNPO1Q92973 898 aaKnown RBP26.98■■□□□ 1.91
CLN5-215ENST00000636767 GCC1Q96CN9 775 aa26.98■■□□□ 1.91
CLN5-215ENST00000636767 CABP1Q9NZU7 370 aa26.98■■□□□ 1.91
CLN5-215ENST00000636767 CIZ1Q9ULV3 898 aaPredicted RBP26.98■■□□□ 1.91
CLN5-215ENST00000636767 HSP90AB1P08238 724 aaKnown RBP26.97■■□□□ 1.91
CLN5-215ENST00000636767 VAMP4O75379 141 aa26.97■■□□□ 1.91
CLN5-215ENST00000636767 C1orf115Q9H7X2 142 aa26.97■■□□□ 1.91
CLN5-215ENST00000636767 POLKQ9UBT6 870 aa26.95■■□□□ 1.91
CLN5-215ENST00000636767 ALKQ9UM73 1620 aa26.95■■□□□ 1.91
CLN5-215ENST00000636767 FBLN1P23142 703 aa26.95■■□□□ 1.9
CLN5-215ENST00000636767 NFE2L2Q16236 605 aa26.95■■□□□ 1.9
CLN5-215ENST00000636767 ARHGAP45Q92619 1136 aa26.95■■□□□ 1.9
CLN5-215ENST00000636767 THUMPD2Q9BTF0 503 aaKnown RBP26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms