RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 RNF223E7ERA6 249 aa-0.02□□□□□ -2.41
CDKL5-210ENST00000636046 FARP2O94887 1054 aaPredicted RBP-0.02□□□□□ -2.41
CDKL5-210ENST00000636046 BMP1P13497 986 aa-0.02□□□□□ -2.41
CDKL5-210ENST00000636046 PEAR1Q5VY43 1037 aaPredicted RBP-0.02□□□□□ -2.41
CDKL5-210ENST00000636046 ILDR2Q71H61 639 aa-0.02□□□□□ -2.41
CDKL5-210ENST00000636046 C1QL4Q86Z23 238 aa-0.02□□□□□ -2.41
CDKL5-210ENST00000636046 MPNDQ8N594 471 aa-0.02□□□□□ -2.41
CDKL5-210ENST00000636046 TRIM52Q96A61 297 aa-0.02□□□□□ -2.41
CDKL5-210ENST00000636046 TRERF1Q96PN7 1200 aa-0.02□□□□□ -2.41
CDKL5-210ENST00000636046 SLC4A5Q9BY07 1137 aa-0.02□□□□□ -2.41
CDKL5-210ENST00000636046 MKL2Q9ULH7 1088 aa-0.02□□□□□ -2.41
CDKL5-210ENST00000636046 BOLA1Q9Y3E2 137 aa-0.02□□□□□ -2.41
CDKL5-210ENST00000636046 PCDHB13Q9Y5F0 798 aa-0.02□□□□□ -2.41
CDKL5-210ENST00000636046 MUC16Q8WXI7 14507 aa-0.02□□□□□ -2.41
CDKL5-210ENST00000636046 FBN3Q75N90 2809 aa-0.03□□□□□ -2.41
CDKL5-210ENST00000636046 ANKRD33BA6NCL7 494 aa-0.03□□□□□ -2.41
CDKL5-210ENST00000636046 SOBPA7XYQ1 873 aa-0.03□□□□□ -2.41
CDKL5-210ENST00000636046 IKBKBO14920 756 aa-0.03□□□□□ -2.41
CDKL5-210ENST00000636046 WNT11O96014 354 aa-0.03□□□□□ -2.41
CDKL5-210ENST00000636046 SLPIP03973 132 aa-0.03□□□□□ -2.41
CDKL5-210ENST00000636046 H2AFB1P0C5Y9 115 aa-0.03□□□□□ -2.41
CDKL5-210ENST00000636046 H2AFB2P0C5Z0 115 aa-0.03□□□□□ -2.41
CDKL5-210ENST00000636046 IL12RB1P42701 662 aa-0.03□□□□□ -2.41
CDKL5-210ENST00000636046 SNRPNP63162 240 aaKnown RBP-0.03□□□□□ -2.41
CDKL5-210ENST00000636046 RING1Q06587 406 aa-0.03□□□□□ -2.41
CDKL5-210ENST00000636046 SKOR2Q2VWA4 1001 aaPredicted RBP-0.03□□□□□ -2.41
CDKL5-210ENST00000636046 TIGD5Q53EQ6 642 aa-0.03□□□□□ -2.41
CDKL5-210ENST00000636046 EPHA10Q5JZY3 1008 aa-0.03□□□□□ -2.41
CDKL5-210ENST00000636046 ZNF362Q5T0B9 420 aaPredicted RBP-0.03□□□□□ -2.41
CDKL5-210ENST00000636046 PPP4R3CPQ6ZMV5 832 aa-0.03□□□□□ -2.41
CDKL5-210ENST00000636046 TRIM46Q7Z4K8 759 aa-0.03□□□□□ -2.41
CDKL5-210ENST00000636046 CILP2Q8IUL8 1156 aa-0.03□□□□□ -2.41
CDKL5-210ENST00000636046 SCUBE1Q8IWY4 988 aa-0.03□□□□□ -2.41
CDKL5-210ENST00000636046 WASF1Q92558 559 aa-0.03□□□□□ -2.41
CDKL5-210ENST00000636046 EDAQ92838 391 aa-0.03□□□□□ -2.41
CDKL5-210ENST00000636046 SLC38A3Q99624 504 aa-0.03□□□□□ -2.41
CDKL5-210ENST00000636046 SGIP1Q9BQI5 828 aa-0.03□□□□□ -2.41
CDKL5-210ENST00000636046 SCAND2PQ9GZW5 306 aaPredicted RBP-0.03□□□□□ -2.41
CDKL5-210ENST00000636046 BCL2L12Q9HB09 334 aa-0.03□□□□□ -2.41
CDKL5-210ENST00000636046 C11orf21Q9P2W6 132 aa-0.03□□□□□ -2.41
CDKL5-210ENST00000636046 TSR3Q9UJK0 312 aaKnown RBP-0.03□□□□□ -2.41
CDKL5-210ENST00000636046 ZBTB32Q9Y2Y4 487 aaPredicted RBP-0.03□□□□□ -2.41
CDKL5-210ENST00000636046 ANKRD17O75179 2603 aaKnown RBP-0.03□□□□□ -2.41
CDKL5-210ENST00000636046 BCRP11274 1271 aa-0.04□□□□□ -2.42
CDKL5-210ENST00000636046 TNFRSF1AP19438 455 aa-0.04□□□□□ -2.42
CDKL5-210ENST00000636046 GDF5P43026 501 aa-0.04□□□□□ -2.42
CDKL5-210ENST00000636046 MNX1P50219 401 aaPredicted RBP-0.04□□□□□ -2.42
CDKL5-210ENST00000636046 SRSF11Q05519 484 aaKnown RBP-0.04□□□□□ -2.42
CDKL5-210ENST00000636046 IFNL1Q8IU54 200 aa-0.04□□□□□ -2.42
CDKL5-210ENST00000636046 ZFPM1Q8IX07 1006 aa-0.04□□□□□ -2.42
CDKL5-210ENST00000636046 ANKLE1Q8NAG6 615 aa-0.04□□□□□ -2.42
CDKL5-210ENST00000636046 ZBTB8BQ8NAP8 495 aaPredicted RBP-0.04□□□□□ -2.42
CDKL5-210ENST00000636046 HPS1Q92902 700 aa-0.04□□□□□ -2.42
CDKL5-210ENST00000636046 VOPP1Q96AW1 172 aa-0.04□□□□□ -2.42
CDKL5-210ENST00000636046 ZFP42Q96MM3 310 aa-0.04□□□□□ -2.42
CDKL5-210ENST00000636046 SUV39H2Q9H5I1 410 aa-0.04□□□□□ -2.42
CDKL5-210ENST00000636046 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP-0.04□□□□□ -2.42
CDKL5-210ENST00000636046 TESQ9UGI8 421 aaKnown RBP-0.04□□□□□ -2.42
CDKL5-210ENST00000636046 HPS5Q9UPZ3 1129 aa-0.04□□□□□ -2.42
CDKL5-210ENST00000636046 MEGF11A6BM72 1044 aa-0.05□□□□□ -2.42
CDKL5-210ENST00000636046 SUSD5O60279 629 aa-0.05□□□□□ -2.42
CDKL5-210ENST00000636046 THBS1P07996 1170 aa-0.05□□□□□ -2.42
CDKL5-210ENST00000636046 CELA3BP08861 270 aa-0.05□□□□□ -2.42
CDKL5-210ENST00000636046 JUNBP17275 347 aaPredicted RBP-0.05□□□□□ -2.42
CDKL5-210ENST00000636046 MKRN3Q13064 507 aaKnown RBP-0.05□□□□□ -2.42
CDKL5-210ENST00000636046 SMN1Q16637 294 aaKnown RBP-0.05□□□□□ -2.42
CDKL5-210ENST00000636046 KRT71Q3SY84 523 aa-0.05□□□□□ -2.42
CDKL5-210ENST00000636046 PPP4R3BQ5MIZ7 849 aa-0.05□□□□□ -2.42
CDKL5-210ENST00000636046 MSL1Q68DK7 614 aa-0.05□□□□□ -2.42
CDKL5-210ENST00000636046 SH3RF1Q7Z6J0 888 aa-0.05□□□□□ -2.42
CDKL5-210ENST00000636046 NANOS1Q8WY41 292 aaKnown RBP-0.05□□□□□ -2.42
CDKL5-210ENST00000636046 GPR20Q99678 358 aa-0.05□□□□□ -2.42
CDKL5-210ENST00000636046 A0A0G2JLL6 359 aaPredicted RBP-0.06□□□□□ -2.42
CDKL5-210ENST00000636046 J3QL48 77 aa-0.06□□□□□ -2.42
CDKL5-210ENST00000636046 PIK3R2O00459 728 aa-0.06□□□□□ -2.42
CDKL5-210ENST00000636046 CYR61O00622 381 aa-0.06□□□□□ -2.42
CDKL5-210ENST00000636046 ADAMTS4O75173 837 aa-0.06□□□□□ -2.42
CDKL5-210ENST00000636046 FUT4P22083 530 aa-0.06□□□□□ -2.42
CDKL5-210ENST00000636046 GRNP28799 593 aaKnown RBP-0.06□□□□□ -2.42
CDKL5-210ENST00000636046 SSBP2P81877 361 aaPredicted RBP-0.06□□□□□ -2.42
CDKL5-210ENST00000636046 FBLN2P98095 1184 aa-0.06□□□□□ -2.42
CDKL5-210ENST00000636046 GOLGA2Q08379 1002 aa-0.06□□□□□ -2.42
CDKL5-210ENST00000636046 NFIXQ14938 502 aa-0.06□□□□□ -2.42
CDKL5-210ENST00000636046 SPATS1Q496A3 300 aa-0.06□□□□□ -2.42
CDKL5-210ENST00000636046 MPRIPQ6WCQ1 1025 aa-0.06□□□□□ -2.42
CDKL5-210ENST00000636046 AMIGO3Q86WK7 504 aa-0.06□□□□□ -2.42
CDKL5-210ENST00000636046 ANKLE2Q86XL3 938 aa-0.06□□□□□ -2.42
CDKL5-210ENST00000636046 SNIP1Q8TAD8 396 aaKnown RBP-0.06□□□□□ -2.42
CDKL5-210ENST00000636046 SHISA4Q96DD7 197 aa-0.06□□□□□ -2.42
CDKL5-210ENST00000636046 WBP1Q96G27 269 aa-0.06□□□□□ -2.42
CDKL5-210ENST00000636046 CRAMP1Q96RY5 1269 aa-0.06□□□□□ -2.42
CDKL5-210ENST00000636046 RRAGCQ9HB90 399 aa-0.06□□□□□ -2.42
CDKL5-210ENST00000636046 TENM3Q9P273 2699 aa-0.06□□□□□ -2.42
CDKL5-210ENST00000636046 CNTNAP4Q9C0A0 1308 aa-0.07□□□□□ -2.42
CDKL5-210ENST00000636046 KIAA1324LA8MWY0 1029 aaPredicted RBP-0.07□□□□□ -2.42
CDKL5-210ENST00000636046 GNB5O14775 395 aa-0.07□□□□□ -2.42
CDKL5-210ENST00000636046 PPEF1O14829 653 aaPredicted RBP-0.07□□□□□ -2.42
CDKL5-210ENST00000636046 MAN1A2O60476 641 aa-0.07□□□□□ -2.42
CDKL5-210ENST00000636046 MED26O95402 600 aa-0.07□□□□□ -2.42
CDKL5-210ENST00000636046 SLC4A2P04920 1241 aa-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms