RNA–Protein interactions for RNA: ENST00000635996.1

EFHC1-213, Transcript of EF-hand domain containing 1, humanhuman

TSL 5 BASIC

Gene EFHC1, Length 2,548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-213ENST00000635996 USP6P35125 1406 aa12.45□□□□□ -0.42
EFHC1-213ENST00000635996 TTC21BQ7Z4L5 1316 aa12.44□□□□□ -0.42
EFHC1-213ENST00000635996 PAK3O75914 559 aaPredicted RBP12.44□□□□□ -0.42
EFHC1-213ENST00000635996 POLR3AO14802 1390 aaPredicted RBP12.44□□□□□ -0.42
EFHC1-213ENST00000635996 NCOA3Q9Y6Q9 1424 aa12.44□□□□□ -0.42
EFHC1-213ENST00000635996 FOXO3O43524 673 aa12.44□□□□□ -0.42
EFHC1-213ENST00000635996 CADPS2Q86UW7 1296 aa12.44□□□□□ -0.42
EFHC1-213ENST00000635996 FBLN1P23142 703 aa12.43□□□□□ -0.42
EFHC1-213ENST00000635996 XPCQ01831 940 aaPredicted RBP12.43□□□□□ -0.42
EFHC1-213ENST00000635996 PSME1Q06323 249 aa12.43□□□□□ -0.42
EFHC1-213ENST00000635996 C1orf167Q5SNV9 1468 aa12.43□□□□□ -0.42
EFHC1-213ENST00000635996 ANKRD26Q9UPS8 1709 aa12.43□□□□□ -0.42
EFHC1-213ENST00000635996 NRKQ7Z2Y5 1582 aa12.42□□□□□ -0.42
EFHC1-213ENST00000635996 MST1RQ04912 1400 aa12.42□□□□□ -0.42
EFHC1-213ENST00000635996 NUTM2GQ5VZR2 741 aa12.42□□□□□ -0.42
EFHC1-213ENST00000635996 PNISRQ8TF01 805 aaKnown RBP12.42□□□□□ -0.42
EFHC1-213ENST00000635996 COG3Q96JB2 828 aa12.42□□□□□ -0.42
EFHC1-213ENST00000635996 DCCP43146 1447 aa12.41□□□□□ -0.42
EFHC1-213ENST00000635996 SOX12O15370 315 aa12.41□□□□□ -0.42
EFHC1-213ENST00000635996 MTHFSP49914 203 aa12.41□□□□□ -0.42
EFHC1-213ENST00000635996 SENP3-EIF4A1A0A087X0R7 540 aa12.4□□□□□ -0.42
EFHC1-213ENST00000635996 DDX17Q92841 729 aaKnown RBP12.4□□□□□ -0.42
EFHC1-213ENST00000635996 PPM1GO15355 546 aaPredicted RBP12.4□□□□□ -0.42
EFHC1-213ENST00000635996 PLEKHG5O94827 1062 aa12.4□□□□□ -0.42
EFHC1-213ENST00000635996 SSH2Q76I76 1423 aa12.39□□□□□ -0.43
EFHC1-213ENST00000635996 ABTB2Q8N961 1025 aa12.39□□□□□ -0.43
EFHC1-213ENST00000635996 LMOD2Q6P5Q4 547 aa12.39□□□□□ -0.43
EFHC1-213ENST00000635996 TTC21AQ8NDW8 1320 aa12.39□□□□□ -0.43
EFHC1-213ENST00000635996 MAP2P11137 1827 aaKnown RBP12.38□□□□□ -0.43
EFHC1-213ENST00000635996 NLRP6P59044 892 aa12.38□□□□□ -0.43
EFHC1-213ENST00000635996 HNRNPUQ00839 825 aaKnown RBP eCLIP12.38□□□□□ -0.43
EFHC1-213ENST00000635996 SLAIN2Q9P270 581 aa12.38□□□□□ -0.43
EFHC1-213ENST00000635996 PIK3C2AO00443 1686 aa12.37□□□□□ -0.43
EFHC1-213ENST00000635996 KRT28Q7Z3Y7 464 aa12.37□□□□□ -0.43
EFHC1-213ENST00000635996 RRS1Q15050 365 aaKnown RBP12.37□□□□□ -0.43
EFHC1-213ENST00000635996 KIF1AQ12756 1690 aa12.37□□□□□ -0.43
EFHC1-213ENST00000635996 WDR43Q15061 677 aaKnown RBP eCLIP12.36□□□□□ -0.43
EFHC1-213ENST00000635996 LTBP4Q8N2S1 1624 aa12.36□□□□□ -0.43
EFHC1-213ENST00000635996 EMILIN1Q9Y6C2 1016 aa12.36□□□□□ -0.43
EFHC1-213ENST00000635996 BRINP3Q76B58 766 aa12.35□□□□□ -0.43
EFHC1-213ENST00000635996 CFAP53Q96M91 514 aa12.35□□□□□ -0.43
EFHC1-213ENST00000635996 POLKQ9UBT6 870 aa12.35□□□□□ -0.43
EFHC1-213ENST00000635996 ADAMTS8Q9UP79 889 aa12.35□□□□□ -0.43
EFHC1-213ENST00000635996 OVOS2A0A0J9YW53 1432 aa12.35□□□□□ -0.43
EFHC1-213ENST00000635996 OVOS2Q6IE36 1432 aa12.35□□□□□ -0.43
EFHC1-213ENST00000635996 SCAF1Q9H7N4 1312 aaKnown RBP12.33□□□□□ -0.44
EFHC1-213ENST00000635996 NPHP3Q7Z494 1330 aa12.33□□□□□ -0.44
EFHC1-213ENST00000635996 CENPBP07199 599 aaPredicted RBP12.33□□□□□ -0.44
EFHC1-213ENST00000635996 USP31Q70CQ4 1352 aa12.32□□□□□ -0.44
EFHC1-213ENST00000635996 TRPM3Q9HCF6 1732 aaPredicted RBP12.32□□□□□ -0.44
EFHC1-213ENST00000635996 MARF1Q9Y4F3 1742 aaKnown RBP12.32□□□□□ -0.44
EFHC1-213ENST00000635996 SALL2Q9Y467 1007 aaPredicted RBP12.32□□□□□ -0.44
EFHC1-213ENST00000635996 AATKQ6ZMQ8 1374 aa12.31□□□□□ -0.44
EFHC1-213ENST00000635996 SHPRHQ149N8 1683 aa12.31□□□□□ -0.44
EFHC1-213ENST00000635996 ZBTB7CA1YPR0 619 aa12.31□□□□□ -0.44
EFHC1-213ENST00000635996 U2SURPO15042 1029 aaKnown RBP12.31□□□□□ -0.44
EFHC1-213ENST00000635996 CCDC146Q8IYE0 955 aa12.31□□□□□ -0.44
EFHC1-213ENST00000635996 DIAPH1O60610 1272 aaKnown RBP12.3□□□□□ -0.44
EFHC1-213ENST00000635996 U2AF1L5P0DN76 240 aaPredicted RBP12.29□□□□□ -0.44
EFHC1-213ENST00000635996 U2AF1Q01081 240 aaKnown RBP eCLIP12.29□□□□□ -0.44
EFHC1-213ENST00000635996 MAP3K19Q56UN5 1328 aa12.29□□□□□ -0.44
EFHC1-213ENST00000635996 PXDNQ92626 1479 aa12.28□□□□□ -0.44
EFHC1-213ENST00000635996 AMPHP49418 695 aa12.28□□□□□ -0.44
EFHC1-213ENST00000635996 NUDCQ9Y266 331 aa12.28□□□□□ -0.44
EFHC1-213ENST00000635996 COL3A1P02461 1466 aaPredicted RBP12.28□□□□□ -0.44
EFHC1-213ENST00000635996 PNPLA6Q8IY17 1366 aa12.28□□□□□ -0.44
EFHC1-213ENST00000635996 HSP90AB2PQ58FF8 381 aa12.28□□□□□ -0.44
EFHC1-213ENST00000635996 ALS2Q96Q42 1657 aa12.27□□□□□ -0.44
EFHC1-213ENST00000635996 PEAK1Q9H792 1746 aa12.27□□□□□ -0.44
EFHC1-213ENST00000635996 PIP4K2BP78356 416 aa12.27□□□□□ -0.45
EFHC1-213ENST00000635996 CABLES1Q8TDN4 633 aa12.27□□□□□ -0.45
EFHC1-213ENST00000635996 CDK12Q9NYV4 1490 aaPredicted RBP12.27□□□□□ -0.45
EFHC1-213ENST00000635996 USP54Q70EL1 1684 aa12.27□□□□□ -0.45
EFHC1-213ENST00000635996 SMG6Q86US8 1419 aaKnown RBP12.27□□□□□ -0.45
EFHC1-213ENST00000635996 ROBO1Q9Y6N7 1651 aa12.27□□□□□ -0.45
EFHC1-213ENST00000635996 TNS3Q68CZ2 1445 aa12.26□□□□□ -0.45
EFHC1-213ENST00000635996 GCP02774 474 aa12.26□□□□□ -0.45
EFHC1-213ENST00000635996 LTN1O94822 1766 aa12.26□□□□□ -0.45
EFHC1-213ENST00000635996 SPATA31A3Q5VYP0 1347 aa12.26□□□□□ -0.45
EFHC1-213ENST00000635996 SBNO1A3KN83 1393 aa12.26□□□□□ -0.45
EFHC1-213ENST00000635996 BLMP54132 1417 aaPredicted RBP12.26□□□□□ -0.45
EFHC1-213ENST00000635996 KCNH5Q8NCM2 988 aa12.26□□□□□ -0.45
EFHC1-213ENST00000635996 SOS2Q07890 1332 aaPredicted RBP12.25□□□□□ -0.45
EFHC1-213ENST00000635996 ZC3H6P61129 1189 aaKnown RBP12.25□□□□□ -0.45
EFHC1-213ENST00000635996 HMOX1P09601 288 aa12.24□□□□□ -0.45
EFHC1-213ENST00000635996 IL13P35225 146 aa12.24□□□□□ -0.45
EFHC1-213ENST00000635996 LTV1Q96GA3 475 aaPredicted RBP12.24□□□□□ -0.45
EFHC1-213ENST00000635996 ZBED9Q6R2W3 1325 aa12.24□□□□□ -0.45
EFHC1-213ENST00000635996 INSRP06213 1382 aa12.24□□□□□ -0.45
EFHC1-213ENST00000635996 FLT4P35916 1363 aa12.24□□□□□ -0.45
EFHC1-213ENST00000635996 NHSL1Q5SYE7 1610 aa12.24□□□□□ -0.45
EFHC1-213ENST00000635996 UBAP1LF5GYI3 381 aa12.24□□□□□ -0.45
EFHC1-213ENST00000635996 APAF1O14727 1248 aa12.24□□□□□ -0.45
EFHC1-213ENST00000635996 TOM1O60784 492 aa12.24□□□□□ -0.45
EFHC1-213ENST00000635996 EIF4A2Q14240 407 aaKnown RBP12.24□□□□□ -0.45
EFHC1-213ENST00000635996 NFAT5O94916 1531 aa12.23□□□□□ -0.45
EFHC1-213ENST00000635996 MED1Q15648 1581 aaPredicted RBP12.23□□□□□ -0.45
EFHC1-213ENST00000635996 USP19O94966 1318 aa12.23□□□□□ -0.45
EFHC1-213ENST00000635996 HOXC9P31274 260 aa12.23□□□□□ -0.45
EFHC1-213ENST00000635996 NEUROD2Q15784 382 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms