RNA–Protein interactions for RNA: ENST00000635904.1

CACNB4-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 5

Gene CACNB4, Length 2,444 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-217ENST00000635904 PRKRIP1Q9H875 184 aaPredicted RBP11.11□□□□□ -0.63
CACNB4-217ENST00000635904 NHSL1Q5SYE7 1610 aa11.11□□□□□ -0.63
CACNB4-217ENST00000635904 PXDNQ92626 1479 aa11.11□□□□□ -0.63
CACNB4-217ENST00000635904 TTC21BQ7Z4L5 1316 aa11.11□□□□□ -0.63
CACNB4-217ENST00000635904 FYB1O15117 783 aa11.1□□□□□ -0.63
CACNB4-217ENST00000635904 CC2D1BQ5T0F9 858 aaKnown RBP11.1□□□□□ -0.63
CACNB4-217ENST00000635904 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.1□□□□□ -0.63
CACNB4-217ENST00000635904 DDX17Q92841 729 aaKnown RBP11.1□□□□□ -0.63
CACNB4-217ENST00000635904 NSD2O96028 1365 aa11.1□□□□□ -0.63
CACNB4-217ENST00000635904 BRD4O60885 1362 aaPredicted RBP11.1□□□□□ -0.63
CACNB4-217ENST00000635904 MARF1Q9Y4F3 1742 aaKnown RBP11.1□□□□□ -0.63
CACNB4-217ENST00000635904 XPCQ01831 940 aaPredicted RBP11.09□□□□□ -0.63
CACNB4-217ENST00000635904 CNGB1Q14028 1251 aaPredicted RBP11.09□□□□□ -0.63
CACNB4-217ENST00000635904 NME9Q86XW9 330 aa11.09□□□□□ -0.63
CACNB4-217ENST00000635904 NPHP3Q7Z494 1330 aa11.09□□□□□ -0.63
CACNB4-217ENST00000635904 ANP32CO43423 234 aa11.09□□□□□ -0.63
CACNB4-217ENST00000635904 PSME1Q06323 249 aa11.09□□□□□ -0.63
CACNB4-217ENST00000635904 PELP1Q8IZL8 1130 aaKnown RBP11.09□□□□□ -0.63
CACNB4-217ENST00000635904 MIER1Q8N108 512 aa11.09□□□□□ -0.63
CACNB4-217ENST00000635904 USP54Q70EL1 1684 aa11.09□□□□□ -0.63
CACNB4-217ENST00000635904 TTC21AQ8NDW8 1320 aa11.09□□□□□ -0.63
CACNB4-217ENST00000635904 OVOS2A0A0J9YW53 1432 aa11.08□□□□□ -0.64
CACNB4-217ENST00000635904 OVOS2Q6IE36 1432 aa11.08□□□□□ -0.64
CACNB4-217ENST00000635904 GGNBP2Q9H3C7 697 aa11.08□□□□□ -0.64
CACNB4-217ENST00000635904 ALS2Q96Q42 1657 aa11.08□□□□□ -0.64
CACNB4-217ENST00000635904 TOM1O60784 492 aa11.08□□□□□ -0.64
CACNB4-217ENST00000635904 KRT28Q7Z3Y7 464 aa11.07□□□□□ -0.64
CACNB4-217ENST00000635904 ZRANB1Q9UGI0 708 aa11.07□□□□□ -0.64
CACNB4-217ENST00000635904 AHDC1Q5TGY3 1603 aaPredicted RBP11.07□□□□□ -0.64
CACNB4-217ENST00000635904 SOS2Q07890 1332 aaPredicted RBP11.07□□□□□ -0.64
CACNB4-217ENST00000635904 USP31Q70CQ4 1352 aa11.07□□□□□ -0.64
CACNB4-217ENST00000635904 RALBP1Q15311 655 aa11.06□□□□□ -0.64
CACNB4-217ENST00000635904 SBNO1A3KN83 1393 aa11.06□□□□□ -0.64
CACNB4-217ENST00000635904 UBAP1LF5GYI3 381 aa11.06□□□□□ -0.64
CACNB4-217ENST00000635904 TNS3Q68CZ2 1445 aa11.06□□□□□ -0.64
CACNB4-217ENST00000635904 PAK3O75914 559 aaPredicted RBP11.05□□□□□ -0.64
CACNB4-217ENST00000635904 ABTB2Q8N961 1025 aa11.05□□□□□ -0.64
CACNB4-217ENST00000635904 MORC1Q86VD1 984 aa11.04□□□□□ -0.64
CACNB4-217ENST00000635904 PIP4K2BP78356 416 aa11.04□□□□□ -0.64
CACNB4-217ENST00000635904 SPATA31A3Q5VYP0 1347 aa11.03□□□□□ -0.64
CACNB4-217ENST00000635904 MYBBP1AQ9BQG0 1328 aaKnown RBP11.03□□□□□ -0.64
CACNB4-217ENST00000635904 COL16A1Q07092 1604 aaPredicted RBP11.03□□□□□ -0.64
CACNB4-217ENST00000635904 COG3Q96JB2 828 aa11.03□□□□□ -0.64
CACNB4-217ENST00000635904 PPP2R1AP30153 589 aa11.03□□□□□ -0.64
CACNB4-217ENST00000635904 TNNT2P45379 298 aaPredicted RBP11.03□□□□□ -0.64
CACNB4-217ENST00000635904 NLRP6P59044 892 aa11.03□□□□□ -0.64
CACNB4-217ENST00000635904 NUTM2GQ5VZR2 741 aa11.03□□□□□ -0.64
CACNB4-217ENST00000635904 CRYBG1Q9Y4K1 1723 aa11.03□□□□□ -0.64
CACNB4-217ENST00000635904 PHLPP1O60346 1717 aa11.02□□□□□ -0.65
CACNB4-217ENST00000635904 SLIT3O75094 1523 aa11.02□□□□□ -0.65
CACNB4-217ENST00000635904 MED1Q15648 1581 aaPredicted RBP11.02□□□□□ -0.65
CACNB4-217ENST00000635904 MAP2P11137 1827 aaKnown RBP11.02□□□□□ -0.65
CACNB4-217ENST00000635904 FBLN1P23142 703 aa11.01□□□□□ -0.65
CACNB4-217ENST00000635904 USP19O94966 1318 aa11.01□□□□□ -0.65
CACNB4-217ENST00000635904 NFAT5O94916 1531 aa11.01□□□□□ -0.65
CACNB4-217ENST00000635904 CCDC184Q52MB2 194 aa11.01□□□□□ -0.65
CACNB4-217ENST00000635904 ARHGEF10O15013 1369 aa11.01□□□□□ -0.65
CACNB4-217ENST00000635904 AATKQ6ZMQ8 1374 aa11.01□□□□□ -0.65
CACNB4-217ENST00000635904 NLRP13Q86W25 1043 aa11□□□□□ -0.65
CACNB4-217ENST00000635904 PHRF1Q9P1Y6 1649 aaKnown RBP11□□□□□ -0.65
CACNB4-217ENST00000635904 CCER2I3L3R5 266 aa11□□□□□ -0.65
CACNB4-217ENST00000635904 LMOD2Q6P5Q4 547 aa11□□□□□ -0.65
CACNB4-217ENST00000635904 SMG6Q86US8 1419 aaKnown RBP11□□□□□ -0.65
CACNB4-217ENST00000635904 ABCA3Q99758 1704 aa10.99□□□□□ -0.65
CACNB4-217ENST00000635904 POLKQ9UBT6 870 aa10.98□□□□□ -0.65
CACNB4-217ENST00000635904 PEAK1Q9H792 1746 aa10.98□□□□□ -0.65
CACNB4-217ENST00000635904 COL22A1Q8NFW1 1626 aaPredicted RBP10.98□□□□□ -0.65
CACNB4-217ENST00000635904 LTN1O94822 1766 aa10.98□□□□□ -0.65
CACNB4-217ENST00000635904 SOX12O15370 315 aa10.98□□□□□ -0.65
CACNB4-217ENST00000635904 GTF3C3Q9Y5Q9 886 aa10.98□□□□□ -0.65
CACNB4-217ENST00000635904 MTHFSP49914 203 aa10.97□□□□□ -0.65
CACNB4-217ENST00000635904 RRS1Q15050 365 aaKnown RBP10.97□□□□□ -0.65
CACNB4-217ENST00000635904 LRRC59Q96AG4 307 aaKnown RBP10.97□□□□□ -0.65
CACNB4-217ENST00000635904 EMILIN1Q9Y6C2 1016 aa10.97□□□□□ -0.65
CACNB4-217ENST00000635904 PNPLA6Q8IY17 1366 aa10.97□□□□□ -0.65
CACNB4-217ENST00000635904 GCP02774 474 aa10.97□□□□□ -0.65
CACNB4-217ENST00000635904 CABLES1Q8TDN4 633 aa10.97□□□□□ -0.65
CACNB4-217ENST00000635904 COL3A1P02461 1466 aaPredicted RBP10.97□□□□□ -0.65
CACNB4-217ENST00000635904 CDK12Q9NYV4 1490 aaPredicted RBP10.97□□□□□ -0.65
CACNB4-217ENST00000635904 MAP3K19Q56UN5 1328 aa10.96□□□□□ -0.65
CACNB4-217ENST00000635904 PLEKHG5O94827 1062 aa10.96□□□□□ -0.66
CACNB4-217ENST00000635904 KCNH5Q8NCM2 988 aa10.96□□□□□ -0.66
CACNB4-217ENST00000635904 MRS2Q9HD23 443 aa10.96□□□□□ -0.66
CACNB4-217ENST00000635904 SHPRHQ149N8 1683 aa10.95□□□□□ -0.66
CACNB4-217ENST00000635904 INSRP06213 1382 aa10.95□□□□□ -0.66
CACNB4-217ENST00000635904 ARHGEF25Q86VW2 580 aa10.94□□□□□ -0.66
CACNB4-217ENST00000635904 PPM1GO15355 546 aaPredicted RBP10.93□□□□□ -0.66
CACNB4-217ENST00000635904 CPDO75976 1380 aa10.93□□□□□ -0.66
CACNB4-217ENST00000635904 FLT4P35916 1363 aa10.93□□□□□ -0.66
CACNB4-217ENST00000635904 KIF24Q5T7B8 1368 aa10.93□□□□□ -0.66
CACNB4-217ENST00000635904 COL18A1P39060 1754 aa10.93□□□□□ -0.66
CACNB4-217ENST00000635904 RTL1A6NKG5 1358 aa10.93□□□□□ -0.66
CACNB4-217ENST00000635904 HSPA1LP34931 641 aa10.93□□□□□ -0.66
CACNB4-217ENST00000635904 PNISRQ8TF01 805 aaKnown RBP10.93□□□□□ -0.66
CACNB4-217ENST00000635904 KIAA0232Q92628 1395 aa10.92□□□□□ -0.66
CACNB4-217ENST00000635904 JCADQ9P266 1359 aa10.92□□□□□ -0.66
CACNB4-217ENST00000635904 HOXC9P31274 260 aa10.92□□□□□ -0.66
CACNB4-217ENST00000635904 ZC3H6P61129 1189 aaKnown RBP10.92□□□□□ -0.66
CACNB4-217ENST00000635904 HSP90AB2PQ58FF8 381 aa10.92□□□□□ -0.66
CACNB4-217ENST00000635904 RGPD5Q99666 1765 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms