RNA–Protein interactions for RNA: ENST00000635659.1

SMARCA2-244, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-244ENST00000635659 KCNH8Q96L42 1107 aa11.32□□□□□ -0.6
SMARCA2-244ENST00000635659 KCNK17Q96T54 332 aa11.32□□□□□ -0.6
SMARCA2-244ENST00000635659 KIAA1468Q9P260 1216 aa11.32□□□□□ -0.6
SMARCA2-244ENST00000635659 MTMR7Q9Y216 660 aa11.32□□□□□ -0.6
SMARCA2-244ENST00000635659 IGF1RP08069 1367 aa11.31□□□□□ -0.6
SMARCA2-244ENST00000635659 PALM3A6NDB9 673 aaPredicted RBP11.31□□□□□ -0.6
SMARCA2-244ENST00000635659 GRIPAP1Q4V328 841 aa11.31□□□□□ -0.6
SMARCA2-244ENST00000635659 TSC1Q92574 1164 aa11.31□□□□□ -0.6
SMARCA2-244ENST00000635659 ZBED2Q9BTP6 218 aa11.31□□□□□ -0.6
SMARCA2-244ENST00000635659 HOXB1P14653 301 aaPredicted RBP11.29□□□□□ -0.6
SMARCA2-244ENST00000635659 UCN2Q96RP3 112 aa11.29□□□□□ -0.6
SMARCA2-244ENST00000635659 C6orf229H3BNL8 230 aa11.28□□□□□ -0.6
SMARCA2-244ENST00000635659 SLC4A3P48751 1232 aa11.28□□□□□ -0.6
SMARCA2-244ENST00000635659 MAMSTRQ6ZN01 415 aa11.28□□□□□ -0.6
SMARCA2-244ENST00000635659 LMOD1P29536 600 aaPredicted RBP11.27□□□□□ -0.61
SMARCA2-244ENST00000635659 EPS8L1Q8TE68 723 aa11.27□□□□□ -0.61
SMARCA2-244ENST00000635659 SCUBE2Q9NQ36 999 aa11.27□□□□□ -0.61
SMARCA2-244ENST00000635659 RABGEF1Q9UJ41 708 aa11.27□□□□□ -0.61
SMARCA2-244ENST00000635659 KIAA0586Q9BVV6 1533 aa11.26□□□□□ -0.61
SMARCA2-244ENST00000635659 FUT2Q10981 343 aa11.26□□□□□ -0.61
SMARCA2-244ENST00000635659 SLF2Q8IX21 1173 aa11.26□□□□□ -0.61
SMARCA2-244ENST00000635659 PRR7Q8TB68 274 aa11.26□□□□□ -0.61
SMARCA2-244ENST00000635659 PRG4Q92954 1404 aaPredicted RBP11.26□□□□□ -0.61
SMARCA2-244ENST00000635659 ATG7O95352 703 aa11.25□□□□□ -0.61
SMARCA2-244ENST00000635659 HDGFP51858 240 aaKnown RBP11.25□□□□□ -0.61
SMARCA2-244ENST00000635659 TFIP11Q9UBB9 837 aaKnown RBP11.25□□□□□ -0.61
SMARCA2-244ENST00000635659 CTTNBP2Q8WZ74 1663 aa11.24□□□□□ -0.61
SMARCA2-244ENST00000635659 KIF13AQ9H1H9 1805 aa11.24□□□□□ -0.61
SMARCA2-244ENST00000635659 IQGAP2Q13576 1575 aa11.24□□□□□ -0.61
SMARCA2-244ENST00000635659 SNPHO15079 494 aa11.23□□□□□ -0.61
SMARCA2-244ENST00000635659 SEMA3FQ13275 785 aa11.23□□□□□ -0.61
SMARCA2-244ENST00000635659 PNMA1Q8ND90 353 aa11.23□□□□□ -0.61
SMARCA2-244ENST00000635659 SLC4A5Q9BY07 1137 aa11.23□□□□□ -0.61
SMARCA2-244ENST00000635659 MAFBQ9Y5Q3 323 aaPredicted RBP11.23□□□□□ -0.61
SMARCA2-244ENST00000635659 ADCY10Q96PN6 1610 aa11.23□□□□□ -0.61
SMARCA2-244ENST00000635659 CFHP08603 1231 aa11.22□□□□□ -0.61
SMARCA2-244ENST00000635659 ATP6V1AP38606 617 aa11.22□□□□□ -0.61
SMARCA2-244ENST00000635659 NR6A1Q15406 480 aa11.22□□□□□ -0.61
SMARCA2-244ENST00000635659 CARMIL1Q5VZK9 1371 aa11.22□□□□□ -0.61
SMARCA2-244ENST00000635659 SEPT9Q9UHD8 586 aaPredicted RBP11.22□□□□□ -0.61
SMARCA2-244ENST00000635659 FAM98CQ17RN3 349 aaKnown RBP11.21□□□□□ -0.61
SMARCA2-244ENST00000635659 TMEM88BA6NKF7 163 aa11.2□□□□□ -0.62
SMARCA2-244ENST00000635659 EIF4G2P78344 907 aaKnown RBP eCLIP11.2□□□□□ -0.62
SMARCA2-244ENST00000635659 FOXD4L5Q5VV16 416 aaPredicted RBP11.2□□□□□ -0.62
SMARCA2-244ENST00000635659 RETREG3Q86VR2 466 aa11.2□□□□□ -0.62
SMARCA2-244ENST00000635659 FOXD4L4Q8WXT5 416 aaPredicted RBP11.2□□□□□ -0.62
SMARCA2-244ENST00000635659 VRTNQ9H8Y1 702 aa11.2□□□□□ -0.62
SMARCA2-244ENST00000635659 CARNS1A5YM72 827 aa11.19□□□□□ -0.62
SMARCA2-244ENST00000635659 DESI1Q6ICB0 168 aa11.19□□□□□ -0.62
SMARCA2-244ENST00000635659 SYMPKQ92797 1274 aaKnown RBP11.19□□□□□ -0.62
SMARCA2-244ENST00000635659 IVNS1ABPQ9Y6Y0 642 aa11.19□□□□□ -0.62
SMARCA2-244ENST00000635659 RAPGEF2Q9Y4G8 1499 aa11.19□□□□□ -0.62
SMARCA2-244ENST00000635659 PER1O15534 1290 aaPredicted RBP11.18□□□□□ -0.62
SMARCA2-244ENST00000635659 ATP9BO43861 1147 aa11.18□□□□□ -0.62
SMARCA2-244ENST00000635659 PSEN2P49810 448 aa11.18□□□□□ -0.62
SMARCA2-244ENST00000635659 TBC1D9Q6ZT07 1266 aa11.17□□□□□ -0.62
SMARCA2-244ENST00000635659 UGGT2Q9NYU1 1516 aa11.17□□□□□ -0.62
SMARCA2-244ENST00000635659 KIAA0556O60303 1618 aa11.17□□□□□ -0.62
SMARCA2-244ENST00000635659 MAPKBP1O60336 1514 aa11.16□□□□□ -0.62
SMARCA2-244ENST00000635659 DISP1Q96F81 1524 aa11.16□□□□□ -0.62
SMARCA2-244ENST00000635659 KMT5BQ4FZB7 885 aa11.16□□□□□ -0.62
SMARCA2-244ENST00000635659 SAMD7Q7Z3H4 446 aa11.16□□□□□ -0.62
SMARCA2-244ENST00000635659 PRXQ9BXM0 1461 aa11.16□□□□□ -0.62
SMARCA2-244ENST00000635659 ARHGAP33O14559 1287 aa11.15□□□□□ -0.62
SMARCA2-244ENST00000635659 NR1H3Q13133 447 aa11.15□□□□□ -0.62
SMARCA2-244ENST00000635659 CDCA8Q53HL2 280 aa11.15□□□□□ -0.62
SMARCA2-244ENST00000635659 SND1Q7KZF4 910 aaKnown RBP eCLIP11.15□□□□□ -0.62
SMARCA2-244ENST00000635659 RBM25P49756 843 aaKnown RBP11.14□□□□□ -0.63
SMARCA2-244ENST00000635659 CCDC27Q2M243 656 aa11.14□□□□□ -0.63
SMARCA2-244ENST00000635659 B4GALNT3Q6L9W6 998 aa11.14□□□□□ -0.63
SMARCA2-244ENST00000635659 LAPTM4BQ86VI4 370 aa11.14□□□□□ -0.63
SMARCA2-244ENST00000635659 DIP2BQ9P265 1576 aa11.14□□□□□ -0.63
SMARCA2-244ENST00000635659 POTEMA6NI47 508 aa11.13□□□□□ -0.63
SMARCA2-244ENST00000635659 ELOAQ14241 798 aaKnown RBP11.13□□□□□ -0.63
SMARCA2-244ENST00000635659 Q3C1V9 767 aa11.13□□□□□ -0.63
SMARCA2-244ENST00000635659 MORN1Q5T089 497 aa11.13□□□□□ -0.63
SMARCA2-244ENST00000635659 LYPD8Q6UX82 237 aa11.12□□□□□ -0.63
SMARCA2-244ENST00000635659 NFATC2IPQ8NCF5 419 aa11.12□□□□□ -0.63
SMARCA2-244ENST00000635659 GNEQ9Y223 722 aaKnown RBP11.12□□□□□ -0.63
SMARCA2-244ENST00000635659 KANK4Q5T7N3 995 aaPredicted RBP11.11□□□□□ -0.63
SMARCA2-244ENST00000635659 ZNF428Q96B54 188 aa11.11□□□□□ -0.63
SMARCA2-244ENST00000635659 AMOTL2Q9Y2J4 779 aa11.11□□□□□ -0.63
SMARCA2-244ENST00000635659 RNF40O75150 1001 aa11.1□□□□□ -0.63
SMARCA2-244ENST00000635659 ZBBXA8MT70 800 aa11.09□□□□□ -0.63
SMARCA2-244ENST00000635659 ACTN4O43707 911 aaKnown RBP11.09□□□□□ -0.63
SMARCA2-244ENST00000635659 FBXO45P0C2W1 286 aa11.09□□□□□ -0.63
SMARCA2-244ENST00000635659 DMRTA1Q5VZB9 504 aa11.09□□□□□ -0.63
SMARCA2-244ENST00000635659 POTEGQ6S5H5 508 aa11.09□□□□□ -0.63
SMARCA2-244ENST00000635659 POTEEQ6S8J3 1075 aa11.09□□□□□ -0.63
SMARCA2-244ENST00000635659 NBPF3Q9H094 633 aa11.09□□□□□ -0.63
SMARCA2-244ENST00000635659 VPS9D1Q9Y2B5 631 aa11.09□□□□□ -0.63
SMARCA2-244ENST00000635659 SLC27A5Q9Y2P5 690 aa11.09□□□□□ -0.63
SMARCA2-244ENST00000635659 ABCC2Q92887 1545 aa11.09□□□□□ -0.63
SMARCA2-244ENST00000635659 CARMIL2Q6F5E8 1435 aa11.09□□□□□ -0.63
SMARCA2-244ENST00000635659 ABCC10Q5T3U5 1492 aa11.08□□□□□ -0.64
SMARCA2-244ENST00000635659 TNIKQ9UKE5 1360 aa11.08□□□□□ -0.64
SMARCA2-244ENST00000635659 ZC3H4Q9UPT8 1303 aaKnown RBP11.08□□□□□ -0.64
SMARCA2-244ENST00000635659 UHRF1BP1LA0JNW5 1464 aa11.07□□□□□ -0.64
SMARCA2-244ENST00000635659 PBX2P40425 430 aa11.07□□□□□ -0.64
SMARCA2-244ENST00000635659 FKBPLQ9UIM3 349 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms