RNA–Protein interactions for RNA: ENST00000635397.1

SMARCA2-241, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 4

Gene SMARCA2, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-241ENST00000635397 PRDM9Q9NQV7 894 aa9.94□□□□□ -0.82
SMARCA2-241ENST00000635397 POTEMA6NI47 508 aa9.93□□□□□ -0.82
SMARCA2-241ENST00000635397 ZBBXA8MT70 800 aa9.93□□□□□ -0.82
SMARCA2-241ENST00000635397 PPP1R15AO75807 674 aaPredicted RBP9.93□□□□□ -0.82
SMARCA2-241ENST00000635397 ADH1BP00325 375 aa9.93□□□□□ -0.82
SMARCA2-241ENST00000635397 RFX1P22670 979 aa9.93□□□□□ -0.82
SMARCA2-241ENST00000635397 EVA1BQ9NVM1 165 aa9.93□□□□□ -0.82
SMARCA2-241ENST00000635397 FBXO45P0C2W1 286 aa9.92□□□□□ -0.82
SMARCA2-241ENST00000635397 KCNH2Q12809 1159 aa9.92□□□□□ -0.82
SMARCA2-241ENST00000635397 PPP1R12CQ9BZL4 782 aa9.92□□□□□ -0.82
SMARCA2-241ENST00000635397 ACIN1Q9UKV3 1341 aaKnown RBP9.91□□□□□ -0.82
SMARCA2-241ENST00000635397 CDAN1Q8IWY9 1227 aa9.91□□□□□ -0.82
SMARCA2-241ENST00000635397 ARMC2Q8NEN0 867 aa9.91□□□□□ -0.82
SMARCA2-241ENST00000635397 CFAP70Q5T0N1 1121 aa9.9□□□□□ -0.82
SMARCA2-241ENST00000635397 IL21Q9HBE4 155 aa9.9□□□□□ -0.82
SMARCA2-241ENST00000635397 PALM3A6NDB9 673 aaPredicted RBP9.89□□□□□ -0.83
SMARCA2-241ENST00000635397 CCDC24Q8N4L8 307 aa9.89□□□□□ -0.83
SMARCA2-241ENST00000635397 PBXIP1Q96AQ6 731 aa9.89□□□□□ -0.83
SMARCA2-241ENST00000635397 UCN2Q96RP3 112 aa9.89□□□□□ -0.83
SMARCA2-241ENST00000635397 TFIP11Q9UBB9 837 aaKnown RBP9.89□□□□□ -0.83
SMARCA2-241ENST00000635397 LMOD1P29536 600 aaPredicted RBP9.88□□□□□ -0.83
SMARCA2-241ENST00000635397 TRIM26Q12899 539 aaPredicted RBP9.88□□□□□ -0.83
SMARCA2-241ENST00000635397 TJAP1Q5JTD0 557 aa9.88□□□□□ -0.83
SMARCA2-241ENST00000635397 POTEGQ6S5H5 508 aa9.88□□□□□ -0.83
SMARCA2-241ENST00000635397 RETREG2Q8NC44 543 aa9.88□□□□□ -0.83
SMARCA2-241ENST00000635397 ZNF516Q92618 1163 aa9.88□□□□□ -0.83
SMARCA2-241ENST00000635397 SLC6A16Q9GZN6 736 aa9.88□□□□□ -0.83
SMARCA2-241ENST00000635397 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.87□□□□□ -0.83
SMARCA2-241ENST00000635397 PTK2Q05397 1052 aa9.87□□□□□ -0.83
SMARCA2-241ENST00000635397 NBPF14Q5TI25 921 aa9.87□□□□□ -0.83
SMARCA2-241ENST00000635397 PDXDC2PQ6P474 469 aa9.87□□□□□ -0.83
SMARCA2-241ENST00000635397 GPKOWQ92917 476 aaPredicted RBP eCLIP9.87□□□□□ -0.83
SMARCA2-241ENST00000635397 GPSM3Q9Y4H4 160 aa9.86□□□□□ -0.83
SMARCA2-241ENST00000635397 TRAIPQ9BWF2 469 aa9.85□□□□□ -0.83
SMARCA2-241ENST00000635397 MYT1LQ9UL68 1186 aa9.85□□□□□ -0.83
SMARCA2-241ENST00000635397 TBC1D9Q6ZT07 1266 aa9.84□□□□□ -0.83
SMARCA2-241ENST00000635397 UNC93B1Q9H1C4 597 aa9.84□□□□□ -0.83
SMARCA2-241ENST00000635397 PODXL2Q9NZ53 605 aa9.84□□□□□ -0.83
SMARCA2-241ENST00000635397 PTCRAQ6ISU1 281 aaPredicted RBP9.83□□□□□ -0.84
SMARCA2-241ENST00000635397 MAFBQ9Y5Q3 323 aaPredicted RBP9.83□□□□□ -0.84
SMARCA2-241ENST00000635397 ATP9BO43861 1147 aa9.82□□□□□ -0.84
SMARCA2-241ENST00000635397 SRPK2P78362 688 aaKnown RBP9.82□□□□□ -0.84
SMARCA2-241ENST00000635397 NKX2-3Q8TAU0 364 aa9.82□□□□□ -0.84
SMARCA2-241ENST00000635397 ZNF592Q92610 1267 aa9.82□□□□□ -0.84
SMARCA2-241ENST00000635397 ARHGAP9Q9BRR9 750 aa9.82□□□□□ -0.84
SMARCA2-241ENST00000635397 PCDHB9Q9Y5E1 797 aa9.82□□□□□ -0.84
SMARCA2-241ENST00000635397 S1PR4O95977 384 aa9.81□□□□□ -0.84
SMARCA2-241ENST00000635397 PDE4CQ08493 712 aa9.81□□□□□ -0.84
SMARCA2-241ENST00000635397 OCSTAMPQ9BR26 566 aa9.81□□□□□ -0.84
SMARCA2-241ENST00000635397 ZBTB7CA1YPR0 619 aa9.8□□□□□ -0.84
SMARCA2-241ENST00000635397 PIK3CDO00329 1044 aa9.8□□□□□ -0.84
SMARCA2-241ENST00000635397 MCCD1P59942 119 aaPredicted RBP9.8□□□□□ -0.84
SMARCA2-241ENST00000635397 CDCA8Q53HL2 280 aa9.8□□□□□ -0.84
SMARCA2-241ENST00000635397 ZBTB33Q86T24 672 aa9.8□□□□□ -0.84
SMARCA2-241ENST00000635397 CSB-PGBD3P0DP91 1061 aa9.79□□□□□ -0.84
SMARCA2-241ENST00000635397 SKIP12755 728 aa9.79□□□□□ -0.84
SMARCA2-241ENST00000635397 ADAM32Q8TC27 787 aa9.79□□□□□ -0.84
SMARCA2-241ENST00000635397 FCF1Q9Y324 198 aaKnown RBP9.79□□□□□ -0.84
SMARCA2-241ENST00000635397 SH3BP5LQ7L8J4 393 aa9.78□□□□□ -0.84
SMARCA2-241ENST00000635397 NFATC2IPQ8NCF5 419 aa9.78□□□□□ -0.84
SMARCA2-241ENST00000635397 CEP126Q9P2H0 1117 aa9.78□□□□□ -0.84
SMARCA2-241ENST00000635397 LINC01559Q495D7 138 aa9.77□□□□□ -0.85
SMARCA2-241ENST00000635397 SLFNL1Q499Z3 407 aa9.77□□□□□ -0.85
SMARCA2-241ENST00000635397 KCTD17Q8N5Z5 321 aa9.77□□□□□ -0.85
SMARCA2-241ENST00000635397 BAP1Q92560 729 aa9.77□□□□□ -0.85
SMARCA2-241ENST00000635397 MAGEB6P1A0A0J9YX57 407 aa9.76□□□□□ -0.85
SMARCA2-241ENST00000635397 AGERQ15109 404 aa9.76□□□□□ -0.85
SMARCA2-241ENST00000635397 RNF135Q8IUD6 432 aa9.76□□□□□ -0.85
SMARCA2-241ENST00000635397 AEBP1Q8IUX7 1158 aa9.76□□□□□ -0.85
SMARCA2-241ENST00000635397 CARD14Q9BXL6 1004 aa9.76□□□□□ -0.85
SMARCA2-241ENST00000635397 VRTNQ9H8Y1 702 aa9.76□□□□□ -0.85
SMARCA2-241ENST00000635397 USP17L5A8MUK1 530 aa9.75□□□□□ -0.85
SMARCA2-241ENST00000635397 ATG7O95352 703 aa9.75□□□□□ -0.85
SMARCA2-241ENST00000635397 DZIP3Q86Y13 1208 aaKnown RBP9.75□□□□□ -0.85
SMARCA2-241ENST00000635397 FAM174AQ8TBP5 190 aa9.75□□□□□ -0.85
SMARCA2-241ENST00000635397 USTQ9Y2C2 406 aa9.75□□□□□ -0.85
SMARCA2-241ENST00000635397 USP17L3A6NCW0 530 aa9.74□□□□□ -0.85
SMARCA2-241ENST00000635397 USP17L4A6NCW7 530 aa9.74□□□□□ -0.85
SMARCA2-241ENST00000635397 KCNC4Q03721 635 aa9.74□□□□□ -0.85
SMARCA2-241ENST00000635397 USP17L2Q6R6M4 530 aa9.74□□□□□ -0.85
SMARCA2-241ENST00000635397 USP17L1Q7RTZ2 530 aa9.74□□□□□ -0.85
SMARCA2-241ENST00000635397 BPHLQ86WA6 291 aaPredicted RBP9.74□□□□□ -0.85
SMARCA2-241ENST00000635397 HCSTQ9UBK5 93 aa9.74□□□□□ -0.85
SMARCA2-241ENST00000635397 PPEF1O14829 653 aaPredicted RBP9.73□□□□□ -0.85
SMARCA2-241ENST00000635397 KANK4Q5T7N3 995 aaPredicted RBP9.73□□□□□ -0.85
SMARCA2-241ENST00000635397 SH3RF1Q7Z6J0 888 aa9.73□□□□□ -0.85
SMARCA2-241ENST00000635397 PLEKHM2Q8IWE5 1019 aa9.73□□□□□ -0.85
SMARCA2-241ENST00000635397 DEPDC4Q8N2C3 294 aa9.73□□□□□ -0.85
SMARCA2-241ENST00000635397 ZNF511Q8NB15 262 aa9.73□□□□□ -0.85
SMARCA2-241ENST00000635397 FOXJ1Q92949 421 aa9.73□□□□□ -0.85
SMARCA2-241ENST00000635397 PHTF2Q8N3S3 785 aa9.72□□□□□ -0.85
SMARCA2-241ENST00000635397 PLPP7Q8NBV4 271 aa9.71□□□□□ -0.86
SMARCA2-241ENST00000635397 RNF166Q96A37 237 aaPredicted RBP9.71□□□□□ -0.86
SMARCA2-241ENST00000635397 ZBTB24O43167 697 aaPredicted RBP9.7□□□□□ -0.86
SMARCA2-241ENST00000635397 NCOA4Q13772 614 aa9.7□□□□□ -0.86
SMARCA2-241ENST00000635397 ERFEQ4G0M1 354 aa9.7□□□□□ -0.86
SMARCA2-241ENST00000635397 CARNS1A5YM72 827 aa9.69□□□□□ -0.86
SMARCA2-241ENST00000635397 ITGBL1O95965 494 aaPredicted RBP9.69□□□□□ -0.86
SMARCA2-241ENST00000635397 GGCXP38435 758 aa9.69□□□□□ -0.86
SMARCA2-241ENST00000635397 C4orf48Q5BLP8 95 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms