RNA–Protein interactions for RNA: ENST00000635392.1

SMARCA2-240, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 291 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-240ENST00000635392 PTPRNQ16849 979 aa11.1□□□□□ -0.63
SMARCA2-240ENST00000635392 IFFO2Q5TF58 517 aa11.1□□□□□ -0.63
SMARCA2-240ENST00000635392 PBXIP1Q96AQ6 731 aa11.1□□□□□ -0.63
SMARCA2-240ENST00000635392 MAP10Q9P2G4 905 aa11.1□□□□□ -0.63
SMARCA2-240ENST00000635392 FBXO45P0C2W1 286 aa11.09□□□□□ -0.63
SMARCA2-240ENST00000635392 NR1H3Q13133 447 aa11.09□□□□□ -0.63
SMARCA2-240ENST00000635392 MSS51Q4VC12 460 aa11.09□□□□□ -0.63
SMARCA2-240ENST00000635392 FKBPLQ9UIM3 349 aa11.09□□□□□ -0.63
SMARCA2-240ENST00000635392 DXOO77932 396 aaKnown RBP11.08□□□□□ -0.64
SMARCA2-240ENST00000635392 TFIP11Q9UBB9 837 aaKnown RBP11.08□□□□□ -0.64
SMARCA2-240ENST00000635392 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.07□□□□□ -0.64
SMARCA2-240ENST00000635392 A0A0G2JS52 829 aa11.07□□□□□ -0.64
SMARCA2-240ENST00000635392 RFX1P22670 979 aa11.07□□□□□ -0.64
SMARCA2-240ENST00000635392 MMP16P51512 607 aa11.07□□□□□ -0.64
SMARCA2-240ENST00000635392 RGS20O76081 388 aa11.06□□□□□ -0.64
SMARCA2-240ENST00000635392 PNMA1Q8ND90 353 aa11.06□□□□□ -0.64
SMARCA2-240ENST00000635392 EVA1BQ9NVM1 165 aa11.06□□□□□ -0.64
SMARCA2-240ENST00000635392 ZC3H4Q9UPT8 1303 aaKnown RBP11.06□□□□□ -0.64
SMARCA2-240ENST00000635392 ZBBXA8MT70 800 aa11.05□□□□□ -0.64
SMARCA2-240ENST00000635392 SEMA3FQ13275 785 aa11.05□□□□□ -0.64
SMARCA2-240ENST00000635392 ACIN1Q9UKV3 1341 aaKnown RBP11.05□□□□□ -0.64
SMARCA2-240ENST00000635392 EIF4G2P78344 907 aaKnown RBP eCLIP11.04□□□□□ -0.64
SMARCA2-240ENST00000635392 TBC1D9Q6ZT07 1266 aa11.04□□□□□ -0.64
SMARCA2-240ENST00000635392 SPSB2Q99619 263 aa11.04□□□□□ -0.64
SMARCA2-240ENST00000635392 MAFBQ9Y5Q3 323 aaPredicted RBP11.04□□□□□ -0.64
SMARCA2-240ENST00000635392 COPS2P61201 443 aa11.03□□□□□ -0.64
SMARCA2-240ENST00000635392 OCSTAMPQ9BR26 566 aa11.03□□□□□ -0.64
SMARCA2-240ENST00000635392 PRDM9Q9NQV7 894 aa11.03□□□□□ -0.64
SMARCA2-240ENST00000635392 CCNYL3P0C7X3 344 aa11.02□□□□□ -0.65
SMARCA2-240ENST00000635392 LMOD1P29536 600 aaPredicted RBP11.02□□□□□ -0.65
SMARCA2-240ENST00000635392 KCNH2Q12809 1159 aa11.02□□□□□ -0.65
SMARCA2-240ENST00000635392 IRX2Q9BZI1 471 aaPredicted RBP11.02□□□□□ -0.65
SMARCA2-240ENST00000635392 ZBTB7CA1YPR0 619 aa11.01□□□□□ -0.65
SMARCA2-240ENST00000635392 KCTD17Q8N5Z5 321 aa11.01□□□□□ -0.65
SMARCA2-240ENST00000635392 NUDT12Q9BQG2 462 aa11□□□□□ -0.65
SMARCA2-240ENST00000635392 PIK3CDO00329 1044 aa10.99□□□□□ -0.65
SMARCA2-240ENST00000635392 ATP9BO43861 1147 aa10.99□□□□□ -0.65
SMARCA2-240ENST00000635392 ZPR1O75312 459 aa10.99□□□□□ -0.65
SMARCA2-240ENST00000635392 CTHP32929 405 aa10.99□□□□□ -0.65
SMARCA2-240ENST00000635392 PDXDC2PQ6P474 469 aa10.99□□□□□ -0.65
SMARCA2-240ENST00000635392 GPSM3Q9Y4H4 160 aa10.99□□□□□ -0.65
SMARCA2-240ENST00000635392 TLL1O43897 1013 aa10.98□□□□□ -0.65
SMARCA2-240ENST00000635392 KANK4Q5T7N3 995 aaPredicted RBP10.98□□□□□ -0.65
SMARCA2-240ENST00000635392 NYAP1Q6ZVC0 841 aa10.98□□□□□ -0.65
SMARCA2-240ENST00000635392 ATG7O95352 703 aa10.97□□□□□ -0.65
SMARCA2-240ENST00000635392 ADH1BP00325 375 aa10.97□□□□□ -0.65
SMARCA2-240ENST00000635392 TJAP1Q5JTD0 557 aa10.97□□□□□ -0.65
SMARCA2-240ENST00000635392 PTCRAQ6ISU1 281 aaPredicted RBP10.97□□□□□ -0.65
SMARCA2-240ENST00000635392 NFATC2IPQ8NCF5 419 aa10.97□□□□□ -0.65
SMARCA2-240ENST00000635392 MTRQ99707 1265 aa10.97□□□□□ -0.65
SMARCA2-240ENST00000635392 GPKOWQ92917 476 aaPredicted RBP eCLIP10.96□□□□□ -0.65
SMARCA2-240ENST00000635392 USTQ9Y2C2 406 aa10.96□□□□□ -0.65
SMARCA2-240ENST00000635392 CDCA8Q53HL2 280 aa10.95□□□□□ -0.66
SMARCA2-240ENST00000635392 PHTF2Q8N3S3 785 aa10.95□□□□□ -0.66
SMARCA2-240ENST00000635392 ARMC2Q8NEN0 867 aa10.95□□□□□ -0.66
SMARCA2-240ENST00000635392 FAM174AQ8TBP5 190 aa10.95□□□□□ -0.66
SMARCA2-240ENST00000635392 PDE4CQ08493 712 aa10.94□□□□□ -0.66
SMARCA2-240ENST00000635392 ZNF516Q92618 1163 aa10.94□□□□□ -0.66
SMARCA2-240ENST00000635392 CEP126Q9P2H0 1117 aa10.94□□□□□ -0.66
SMARCA2-240ENST00000635392 CARNS1A5YM72 827 aa10.93□□□□□ -0.66
SMARCA2-240ENST00000635392 PTK2Q05397 1052 aa10.93□□□□□ -0.66
SMARCA2-240ENST00000635392 AEBP1Q8IUX7 1158 aa10.93□□□□□ -0.66
SMARCA2-240ENST00000635392 TMEM88BA6NKF7 163 aa10.92□□□□□ -0.66
SMARCA2-240ENST00000635392 SH3BP5LQ7L8J4 393 aa10.92□□□□□ -0.66
SMARCA2-240ENST00000635392 CHIC2Q9UKJ5 165 aa10.92□□□□□ -0.66
SMARCA2-240ENST00000635392 ITGBL1O95965 494 aaPredicted RBP10.91□□□□□ -0.66
SMARCA2-240ENST00000635392 CSB-PGBD3P0DP91 1061 aa10.91□□□□□ -0.66
SMARCA2-240ENST00000635392 PLEKHM2Q8IWE5 1019 aa10.91□□□□□ -0.66
SMARCA2-240ENST00000635392 UNC93B1Q9H1C4 597 aa10.91□□□□□ -0.66
SMARCA2-240ENST00000635392 NBPF14Q5TI25 921 aa10.9□□□□□ -0.66
SMARCA2-240ENST00000635392 IL21Q9HBE4 155 aa10.9□□□□□ -0.66
SMARCA2-240ENST00000635392 MCCD1P59942 119 aaPredicted RBP10.89□□□□□ -0.67
SMARCA2-240ENST00000635392 ADAM32Q8TC27 787 aa10.89□□□□□ -0.67
SMARCA2-240ENST00000635392 VRTNQ9H8Y1 702 aa10.89□□□□□ -0.67
SMARCA2-240ENST00000635392 USP17L3A6NCW0 530 aa10.88□□□□□ -0.67
SMARCA2-240ENST00000635392 USP17L4A6NCW7 530 aa10.88□□□□□ -0.67
SMARCA2-240ENST00000635392 USP17L5A8MUK1 530 aa10.88□□□□□ -0.67
SMARCA2-240ENST00000635392 BRD1O95696 1058 aa10.88□□□□□ -0.67
SMARCA2-240ENST00000635392 SKIP12755 728 aa10.88□□□□□ -0.67
SMARCA2-240ENST00000635392 ELOAQ14241 798 aaKnown RBP10.88□□□□□ -0.67
SMARCA2-240ENST00000635392 USP17L2Q6R6M4 530 aa10.88□□□□□ -0.67
SMARCA2-240ENST00000635392 USP17L1Q7RTZ2 530 aa10.88□□□□□ -0.67
SMARCA2-240ENST00000635392 SH3RF1Q7Z6J0 888 aa10.88□□□□□ -0.67
SMARCA2-240ENST00000635392 SLC6A16Q9GZN6 736 aa10.88□□□□□ -0.67
SMARCA2-240ENST00000635392 NKX2-3Q8TAU0 364 aa10.87□□□□□ -0.67
SMARCA2-240ENST00000635392 ARHGAP9Q9BRR9 750 aa10.86□□□□□ -0.67
SMARCA2-240ENST00000635392 PCDHB9Q9Y5E1 797 aa10.86□□□□□ -0.67
SMARCA2-240ENST00000635392 TSGA10IPQ3SY00 556 aa10.85□□□□□ -0.67
SMARCA2-240ENST00000635392 CCDC24Q8N4L8 307 aa10.85□□□□□ -0.67
SMARCA2-240ENST00000635392 ZMIZ1Q9ULJ6 1067 aa10.85□□□□□ -0.67
SMARCA2-240ENST00000635392 DEPDC4Q8N2C3 294 aa10.84□□□□□ -0.67
SMARCA2-240ENST00000635392 S1PR4O95977 384 aa10.83□□□□□ -0.68
SMARCA2-240ENST00000635392 C4orf48Q5BLP8 95 aa10.83□□□□□ -0.68
SMARCA2-240ENST00000635392 TRAF7Q6Q0C0 670 aa10.83□□□□□ -0.68
SMARCA2-240ENST00000635392 BAP1Q92560 729 aa10.83□□□□□ -0.68
SMARCA2-240ENST00000635392 ZNF592Q92610 1267 aa10.83□□□□□ -0.68
SMARCA2-240ENST00000635392 KCNA1Q09470 495 aa10.82□□□□□ -0.68
SMARCA2-240ENST00000635392 SLFNL1Q499Z3 407 aa10.82□□□□□ -0.68
SMARCA2-240ENST00000635392 RNF135Q8IUD6 432 aa10.82□□□□□ -0.68
SMARCA2-240ENST00000635392 PLPP7Q8NBV4 271 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms