RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 ITPKCQ96DU7 683 aa6.6□□□□□ -1.35
SMARCB1-208ENST00000634926 FAM217BQ9NTX9 383 aaPredicted RBP6.6□□□□□ -1.35
SMARCB1-208ENST00000634926 FDX1P10109 184 aa6.59□□□□□ -1.35
SMARCB1-208ENST00000634926 KCNH2Q12809 1159 aa6.59□□□□□ -1.35
SMARCB1-208ENST00000634926 PTPRNQ16849 979 aa6.59□□□□□ -1.35
SMARCB1-208ENST00000634926 C6orf229H3BNL8 230 aa6.58□□□□□ -1.36
SMARCB1-208ENST00000634926 MAN1A2O60476 641 aa6.58□□□□□ -1.36
SMARCB1-208ENST00000634926 ZIC2O95409 532 aaPredicted RBP6.58□□□□□ -1.36
SMARCB1-208ENST00000634926 NDUFV2P19404 249 aa6.58□□□□□ -1.36
SMARCB1-208ENST00000634926 VARSP26640 1264 aaKnown RBP6.58□□□□□ -1.36
SMARCB1-208ENST00000634926 FOXJ1Q92949 421 aa6.58□□□□□ -1.36
SMARCB1-208ENST00000634926 CNTNAP3BQ96NU0 1288 aa6.58□□□□□ -1.36
SMARCB1-208ENST00000634926 CNTNAP3Q9BZ76 1288 aa6.58□□□□□ -1.36
SMARCB1-208ENST00000634926 DNMT3LQ9UJW3 386 aa6.58□□□□□ -1.36
SMARCB1-208ENST00000634926 GRM5P41594 1212 aa6.57□□□□□ -1.36
SMARCB1-208ENST00000634926 AMER1Q5JTC6 1135 aaPredicted RBP6.57□□□□□ -1.36
SMARCB1-208ENST00000634926 RNFT1Q5M7Z0 435 aa6.57□□□□□ -1.36
SMARCB1-208ENST00000634926 WHAMMQ8TF30 809 aa6.57□□□□□ -1.36
SMARCB1-208ENST00000634926 PLEKHG3A1L390 1219 aa6.56□□□□□ -1.36
SMARCB1-208ENST00000634926 C4orf48Q5BLP8 95 aa6.56□□□□□ -1.36
SMARCB1-208ENST00000634926 ZNF385CQ66K41 422 aaPredicted RBP6.56□□□□□ -1.36
SMARCB1-208ENST00000634926 CCDC102AQ96A19 550 aa6.56□□□□□ -1.36
SMARCB1-208ENST00000634926 CDK15Q96Q40 435 aa6.56□□□□□ -1.36
SMARCB1-208ENST00000634926 SOS2Q07890 1332 aaPredicted RBP6.55□□□□□ -1.36
SMARCB1-208ENST00000634926 PRR7Q8TB68 274 aa6.55□□□□□ -1.36
SMARCB1-208ENST00000634926 MOXD2PA6NHM9 499 aa6.54□□□□□ -1.36
SMARCB1-208ENST00000634926 ARID5BQ14865 1188 aa6.54□□□□□ -1.36
SMARCB1-208ENST00000634926 NUTM1Q86Y26 1132 aa6.54□□□□□ -1.36
SMARCB1-208ENST00000634926 SPIRE2Q8WWL2 714 aa6.54□□□□□ -1.36
SMARCB1-208ENST00000634926 GPCPD1Q9NPB8 672 aa6.54□□□□□ -1.36
SMARCB1-208ENST00000634926 BMP2P12643 396 aa6.53□□□□□ -1.36
SMARCB1-208ENST00000634926 XP32Q5T750 250 aa6.53□□□□□ -1.36
SMARCB1-208ENST00000634926 GPAT2Q6NUI2 795 aa6.53□□□□□ -1.36
SMARCB1-208ENST00000634926 COL25A1Q9BXS0 654 aaPredicted RBP6.53□□□□□ -1.36
SMARCB1-208ENST00000634926 ARHGEF15O94989 841 aa6.52□□□□□ -1.37
SMARCB1-208ENST00000634926 LINC00528Q8N1L1 170 aa6.52□□□□□ -1.37
SMARCB1-208ENST00000634926 MEIOBQ8N635 442 aa6.52□□□□□ -1.37
SMARCB1-208ENST00000634926 MAP10Q9P2G4 905 aa6.52□□□□□ -1.37
SMARCB1-208ENST00000634926 MINK1Q8N4C8 1332 aaPredicted RBP6.51□□□□□ -1.37
SMARCB1-208ENST00000634926 IRS1P35568 1242 aa6.51□□□□□ -1.37
SMARCB1-208ENST00000634926 FAM174AQ8TBP5 190 aa6.51□□□□□ -1.37
SMARCB1-208ENST00000634926 CLCN1P35523 988 aa6.5□□□□□ -1.37
SMARCB1-208ENST00000634926 PTSQ03393 145 aa6.5□□□□□ -1.37
SMARCB1-208ENST00000634926 CFAP99D6REC4 459 aa6.49□□□□□ -1.37
SMARCB1-208ENST00000634926 F12P00748 615 aaPredicted RBP6.49□□□□□ -1.37
SMARCB1-208ENST00000634926 DESI1Q6ICB0 168 aa6.49□□□□□ -1.37
SMARCB1-208ENST00000634926 LYPD8Q6UX82 237 aa6.49□□□□□ -1.37
SMARCB1-208ENST00000634926 FIGNL2A6NMB9 653 aa6.48□□□□□ -1.37
SMARCB1-208ENST00000634926 CTHP32929 405 aa6.48□□□□□ -1.37
SMARCB1-208ENST00000634926 NR5A1Q13285 461 aa6.48□□□□□ -1.37
SMARCB1-208ENST00000634926 PCDHB15Q9Y5E8 787 aa6.48□□□□□ -1.37
SMARCB1-208ENST00000634926 ITGB2P05107 769 aa6.47□□□□□ -1.37
SMARCB1-208ENST00000634926 SSTR3P32745 418 aaPredicted RBP6.47□□□□□ -1.37
SMARCB1-208ENST00000634926 MTMR2Q13614 643 aa6.47□□□□□ -1.37
SMARCB1-208ENST00000634926 SVOPQ8N4V2 548 aa6.47□□□□□ -1.37
SMARCB1-208ENST00000634926 NANOS1Q8WY41 292 aaKnown RBP6.47□□□□□ -1.37
SMARCB1-208ENST00000634926 DNMT3AQ9Y6K1 912 aaPredicted RBP6.47□□□□□ -1.37
SMARCB1-208ENST00000634926 PER1O15534 1290 aaPredicted RBP6.46□□□□□ -1.38
SMARCB1-208ENST00000634926 SLURP2P0DP57 97 aa6.46□□□□□ -1.38
SMARCB1-208ENST00000634926 TTLL8A6PVC2 850 aa6.45□□□□□ -1.38
SMARCB1-208ENST00000634926 RNF225M0QZC1 329 aaPredicted RBP6.45□□□□□ -1.38
SMARCB1-208ENST00000634926 VWA5B2Q8N398 1253 aa6.45□□□□□ -1.38
SMARCB1-208ENST00000634926 CCDC155Q8N6L0 562 aa6.45□□□□□ -1.38
SMARCB1-208ENST00000634926 FSHRP23945 695 aa6.44□□□□□ -1.38
SMARCB1-208ENST00000634926 CBLBQ13191 982 aa6.44□□□□□ -1.38
SMARCB1-208ENST00000634926 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.44□□□□□ -1.38
SMARCB1-208ENST00000634926 C1QTNF2Q9BXJ5 285 aa6.44□□□□□ -1.38
SMARCB1-208ENST00000634926 KRTAP4-8Q9BYQ9 185 aa6.44□□□□□ -1.38
SMARCB1-208ENST00000634926 SLC35F4A4IF30 521 aa6.43□□□□□ -1.38
SMARCB1-208ENST00000634926 SPTLC1O15269 473 aa6.43□□□□□ -1.38
SMARCB1-208ENST00000634926 LYPD4Q6UWN0 246 aa6.43□□□□□ -1.38
SMARCB1-208ENST00000634926 UPP2O95045 317 aa6.42□□□□□ -1.38
SMARCB1-208ENST00000634926 SH3RF1Q7Z6J0 888 aa6.42□□□□□ -1.38
SMARCB1-208ENST00000634926 TSEN34Q9BSV6 310 aaKnown RBP6.42□□□□□ -1.38
SMARCB1-208ENST00000634926 SPDYE5A6NIY4 337 aa6.41□□□□□ -1.38
SMARCB1-208ENST00000634926 IGHA1P01876 353 aa6.41□□□□□ -1.38
SMARCB1-208ENST00000634926 HRCP23327 699 aa6.41□□□□□ -1.38
SMARCB1-208ENST00000634926 AGERQ15109 404 aa6.41□□□□□ -1.38
SMARCB1-208ENST00000634926 RSBN1LQ6PCB5 846 aaPredicted RBP6.41□□□□□ -1.38
SMARCB1-208ENST00000634926 CABLES1Q8TDN4 633 aa6.41□□□□□ -1.38
SMARCB1-208ENST00000634926 SENP3-EIF4A1A0A087X0R7 540 aa6.4□□□□□ -1.38
SMARCB1-208ENST00000634926 ITGA6P23229 1130 aa6.4□□□□□ -1.38
SMARCB1-208ENST00000634926 BPHLQ86WA6 291 aaPredicted RBP6.4□□□□□ -1.38
SMARCB1-208ENST00000634926 TBC1D2Q9BYX2 928 aa6.4□□□□□ -1.38
SMARCB1-208ENST00000634926 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.39□□□□□ -1.39
SMARCB1-208ENST00000634926 SPINT1O43278 529 aa6.39□□□□□ -1.39
SMARCB1-208ENST00000634926 ADAM23O75077 832 aa6.39□□□□□ -1.39
SMARCB1-208ENST00000634926 CTSOP43234 321 aaPredicted RBP6.39□□□□□ -1.39
SMARCB1-208ENST00000634926 GAS6Q14393 721 aa6.39□□□□□ -1.39
SMARCB1-208ENST00000634926 KRI1Q8N9T8 703 aaKnown RBP6.39□□□□□ -1.39
SMARCB1-208ENST00000634926 CUEDC1Q9NWM3 386 aaPredicted RBP6.39□□□□□ -1.39
SMARCB1-208ENST00000634926 KDM2AQ9Y2K7 1162 aa6.39□□□□□ -1.39
SMARCB1-208ENST00000634926 CDC14CA4D256 554 aa6.38□□□□□ -1.39
SMARCB1-208ENST00000634926 ADAMTS2O95450 1211 aa6.38□□□□□ -1.39
SMARCB1-208ENST00000634926 MARSP56192 900 aaKnown RBP6.38□□□□□ -1.39
SMARCB1-208ENST00000634926 PLA2G4EQ3MJ16 856 aa6.38□□□□□ -1.39
SMARCB1-208ENST00000634926 KANK3Q6NY19 840 aa6.38□□□□□ -1.39
SMARCB1-208ENST00000634926 Q6ZVU0 165 aa6.38□□□□□ -1.39
SMARCB1-208ENST00000634926 SH3BP5LQ7L8J4 393 aa6.38□□□□□ -1.39
SMARCB1-208ENST00000634926 AGBL1Q96MI9 1066 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms