RNA–Protein interactions for RNA: ENST00000634925.1

SMARCA2-230, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 1,582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-230ENST00000634925 PSME1Q06323 249 aa15.24■□□□□ 0.03
SMARCA2-230ENST00000634925 MIER1Q8N108 512 aa15.24■□□□□ 0.03
SMARCA2-230ENST00000634925 PRKRIP1Q9H875 184 aaPredicted RBP15.24■□□□□ 0.03
SMARCA2-230ENST00000634925 TRPM3Q9HCF6 1732 aaPredicted RBP15.24■□□□□ 0.03
SMARCA2-230ENST00000634925 NPC1L1Q9UHC9 1359 aa15.24■□□□□ 0.03
SMARCA2-230ENST00000634925 FYB1O15117 783 aa15.24■□□□□ 0.03
SMARCA2-230ENST00000634925 NME9Q86XW9 330 aa15.23■□□□□ 0.03
SMARCA2-230ENST00000634925 PIK3C2AO00443 1686 aa15.22■□□□□ 0.03
SMARCA2-230ENST00000634925 KRT28Q7Z3Y7 464 aa15.22■□□□□ 0.03
SMARCA2-230ENST00000634925 GGNBP2Q9H3C7 697 aa15.22■□□□□ 0.03
SMARCA2-230ENST00000634925 NHSL1Q5SYE7 1610 aa15.22■□□□□ 0.03
SMARCA2-230ENST00000634925 TOM1O60784 492 aa15.21■□□□□ 0.03
SMARCA2-230ENST00000634925 ZRANB1Q9UGI0 708 aa15.21■□□□□ 0.03
SMARCA2-230ENST00000634925 PARD3Q8TEW0 1356 aa15.21■□□□□ 0.03
SMARCA2-230ENST00000634925 NPHP3Q7Z494 1330 aa15.21■□□□□ 0.02
SMARCA2-230ENST00000634925 MARF1Q9Y4F3 1742 aaKnown RBP15.2■□□□□ 0.02
SMARCA2-230ENST00000634925 UBAP1LF5GYI3 381 aa15.2■□□□□ 0.02
SMARCA2-230ENST00000634925 PAK3O75914 559 aaPredicted RBP15.2■□□□□ 0.02
SMARCA2-230ENST00000634925 NSD2O96028 1365 aa15.2■□□□□ 0.02
SMARCA2-230ENST00000634925 PXDNQ92626 1479 aa15.2■□□□□ 0.02
SMARCA2-230ENST00000634925 TTC21AQ8NDW8 1320 aa15.2■□□□□ 0.02
SMARCA2-230ENST00000634925 BRD4O60885 1362 aaPredicted RBP15.19■□□□□ 0.02
SMARCA2-230ENST00000634925 ALS2Q96Q42 1657 aa15.19■□□□□ 0.02
SMARCA2-230ENST00000634925 PIP4K2BP78356 416 aa15.18■□□□□ 0.02
SMARCA2-230ENST00000634925 RALBP1Q15311 655 aa15.18■□□□□ 0.02
SMARCA2-230ENST00000634925 MAP2P11137 1827 aaKnown RBP15.17■□□□□ 0.02
SMARCA2-230ENST00000634925 USP54Q70EL1 1684 aa15.17■□□□□ 0.02
SMARCA2-230ENST00000634925 NUTM2GQ5VZR2 741 aa15.17■□□□□ 0.02
SMARCA2-230ENST00000634925 MORC1Q86VD1 984 aa15.17■□□□□ 0.02
SMARCA2-230ENST00000634925 ABTB2Q8N961 1025 aa15.17■□□□□ 0.02
SMARCA2-230ENST00000634925 SOS2Q07890 1332 aaPredicted RBP15.17■□□□□ 0.02
SMARCA2-230ENST00000634925 OVOS2A0A0J9YW53 1432 aa15.16■□□□□ 0.02
SMARCA2-230ENST00000634925 OVOS2Q6IE36 1432 aa15.16■□□□□ 0.02
SMARCA2-230ENST00000634925 SBNO1A3KN83 1393 aa15.16■□□□□ 0.02
SMARCA2-230ENST00000634925 AHDC1Q5TGY3 1603 aaPredicted RBP15.16■□□□□ 0.02
SMARCA2-230ENST00000634925 TNNT2P45379 298 aaPredicted RBP15.15■□□□□ 0.02
SMARCA2-230ENST00000634925 SCAF1Q9H7N4 1312 aaKnown RBP15.15■□□□□ 0.02
SMARCA2-230ENST00000634925 USP31Q70CQ4 1352 aa15.15■□□□□ 0.02
SMARCA2-230ENST00000634925 NLRP6P59044 892 aa15.15■□□□□ 0.02
SMARCA2-230ENST00000634925 COG3Q96JB2 828 aa15.15■□□□□ 0.02
SMARCA2-230ENST00000634925 PHLPP1O60346 1717 aa15.14■□□□□ 0.01
SMARCA2-230ENST00000634925 FBLN1P23142 703 aa15.14■□□□□ 0.01
SMARCA2-230ENST00000634925 TNS3Q68CZ2 1445 aa15.14■□□□□ 0.01
SMARCA2-230ENST00000634925 LMOD2Q6P5Q4 547 aa15.14■□□□□ 0.01
SMARCA2-230ENST00000634925 SPATA31A3Q5VYP0 1347 aa15.14■□□□□ 0.01
SMARCA2-230ENST00000634925 MYBBP1AQ9BQG0 1328 aaKnown RBP15.14■□□□□ 0.01
SMARCA2-230ENST00000634925 PPP2R1AP30153 589 aa15.13■□□□□ 0.01
SMARCA2-230ENST00000634925 CCDC184Q52MB2 194 aa15.12■□□□□ 0.01
SMARCA2-230ENST00000634925 NLRP13Q86W25 1043 aa15.11■□□□□ 0.01
SMARCA2-230ENST00000634925 COL16A1Q07092 1604 aaPredicted RBP15.1■□□□□ 0.01
SMARCA2-230ENST00000634925 CRYBG1Q9Y4K1 1723 aa15.1■□□□□ 0.01
SMARCA2-230ENST00000634925 MED1Q15648 1581 aaPredicted RBP15.1■□□□□ 0.01
SMARCA2-230ENST00000634925 SOX12O15370 315 aa15.1■□□□□ 0.01
SMARCA2-230ENST00000634925 PLEKHG5O94827 1062 aa15.1■□□□□ 0.01
SMARCA2-230ENST00000634925 CCER2I3L3R5 266 aa15.09■□□□□ 0.01
SMARCA2-230ENST00000634925 USP19O94966 1318 aa15.08■□□□□ 0
SMARCA2-230ENST00000634925 ARHGEF10O15013 1369 aa15.08■□□□□ 0
SMARCA2-230ENST00000634925 SLIT3O75094 1523 aa15.08■□□□□ 0
SMARCA2-230ENST00000634925 PHRF1Q9P1Y6 1649 aaKnown RBP15.08■□□□□ 0
SMARCA2-230ENST00000634925 LTN1O94822 1766 aa15.08■□□□□ 0
SMARCA2-230ENST00000634925 RRS1Q15050 365 aaKnown RBP15.07■□□□□ 0
SMARCA2-230ENST00000634925 POLKQ9UBT6 870 aa15.07■□□□□ 0
SMARCA2-230ENST00000634925 AATKQ6ZMQ8 1374 aa15.07■□□□□ 0
SMARCA2-230ENST00000634925 ABCA3Q99758 1704 aa15.07■□□□□ 0
SMARCA2-230ENST00000634925 NFAT5O94916 1531 aa15.07■□□□□ 0
SMARCA2-230ENST00000634925 MTHFSP49914 203 aa15.07■□□□□ 0
SMARCA2-230ENST00000634925 CABLES1Q8TDN4 633 aa15.07■□□□□ 0
SMARCA2-230ENST00000634925 LRRC59Q96AG4 307 aaKnown RBP15.07■□□□□ 0
SMARCA2-230ENST00000634925 PEAK1Q9H792 1746 aa15.06■□□□□ 0
SMARCA2-230ENST00000634925 EMILIN1Q9Y6C2 1016 aa15.06■□□□□ 0
SMARCA2-230ENST00000634925 GCP02774 474 aa15.05■□□□□ -0
SMARCA2-230ENST00000634925 MRS2Q9HD23 443 aa15.05■□□□□ -0
SMARCA2-230ENST00000634925 COL22A1Q8NFW1 1626 aaPredicted RBP15.03■□□□□ -0
SMARCA2-230ENST00000634925 MAP3K19Q56UN5 1328 aa15.03■□□□□ -0
SMARCA2-230ENST00000634925 PPM1GO15355 546 aaPredicted RBP15.03■□□□□ -0
SMARCA2-230ENST00000634925 KCNH5Q8NCM2 988 aa15.03■□□□□ -0
SMARCA2-230ENST00000634925 SMG6Q86US8 1419 aaKnown RBP15.03■□□□□ -0
SMARCA2-230ENST00000634925 PNPLA6Q8IY17 1366 aa15.03■□□□□ -0
SMARCA2-230ENST00000634925 RGPD5Q99666 1765 aa15.02□□□□□ -0.01
SMARCA2-230ENST00000634925 SHPRHQ149N8 1683 aa15□□□□□ -0.01
SMARCA2-230ENST00000634925 COL3A1P02461 1466 aaPredicted RBP15□□□□□ -0.01
SMARCA2-230ENST00000634925 CDK12Q9NYV4 1490 aaPredicted RBP15□□□□□ -0.01
SMARCA2-230ENST00000634925 HSPA1LP34931 641 aa15□□□□□ -0.01
SMARCA2-230ENST00000634925 ZC3H6P61129 1189 aaKnown RBP15□□□□□ -0.01
SMARCA2-230ENST00000634925 ARHGEF25Q86VW2 580 aa15□□□□□ -0.01
SMARCA2-230ENST00000634925 ZBTB7CA1YPR0 619 aa14.99□□□□□ -0.01
SMARCA2-230ENST00000634925 COL18A1P39060 1754 aa14.99□□□□□ -0.01
SMARCA2-230ENST00000634925 AMPHP49418 695 aa14.98□□□□□ -0.01
SMARCA2-230ENST00000634925 HSP90AB2PQ58FF8 381 aa14.98□□□□□ -0.01
SMARCA2-230ENST00000634925 PNISRQ8TF01 805 aaKnown RBP14.98□□□□□ -0.01
SMARCA2-230ENST00000634925 CFAP53Q96M91 514 aa14.98□□□□□ -0.01
SMARCA2-230ENST00000634925 INSRP06213 1382 aa14.98□□□□□ -0.01
SMARCA2-230ENST00000634925 FLT4P35916 1363 aa14.98□□□□□ -0.01
SMARCA2-230ENST00000634925 HOXC9P31274 260 aa14.97□□□□□ -0.01
SMARCA2-230ENST00000634925 HAP1P54257 671 aaPredicted RBP14.97□□□□□ -0.01
SMARCA2-230ENST00000634925 FAM9BQ8IZU0 186 aa14.97□□□□□ -0.01
SMARCA2-230ENST00000634925 KIAA0232Q92628 1395 aa14.97□□□□□ -0.01
SMARCA2-230ENST00000634925 KIF24Q5T7B8 1368 aa14.96□□□□□ -0.01
SMARCA2-230ENST00000634925 JCADQ9P266 1359 aa14.96□□□□□ -0.01
SMARCA2-230ENST00000634925 IP6K1Q92551 441 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms