RNA–Protein interactions for RNA: ENST00000634760.1

SMARCA2-227, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 5,847 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-227ENST00000634760 SNAPC4Q5SXM2 1469 aa25.27■■□□□ 1.64
SMARCA2-227ENST00000634760 CCDC141Q6ZP82 1450 aa25.27■■□□□ 1.64
SMARCA2-227ENST00000634760 CUL7Q14999 1698 aa25.27■■□□□ 1.64
SMARCA2-227ENST00000634760 ACBD3Q9H3P7 528 aa25.27■■□□□ 1.64
SMARCA2-227ENST00000634760 ARGLU1Q9NWB6 273 aaPredicted RBP25.27■■□□□ 1.64
SMARCA2-227ENST00000634760 EXOSC9Q06265 439 aaKnown RBP25.27■■□□□ 1.64
SMARCA2-227ENST00000634760 ANO8Q9HCE9 1232 aaPredicted RBP25.27■■□□□ 1.64
SMARCA2-227ENST00000634760 AFAP1Q8N556 730 aa25.26■■□□□ 1.63
SMARCA2-227ENST00000634760 DHX8Q14562 1220 aaKnown RBP25.26■■□□□ 1.63
SMARCA2-227ENST00000634760 PRAM1Q96QH2 718 aa25.26■■□□□ 1.63
SMARCA2-227ENST00000634760 PDZRN3Q9UPQ7 1066 aa25.26■■□□□ 1.63
SMARCA2-227ENST00000634760 NFKBIBQ15653 356 aa25.25■■□□□ 1.63
SMARCA2-227ENST00000634760 CWC22Q9HCG8 908 aaKnown RBP25.25■■□□□ 1.63
SMARCA2-227ENST00000634760 AIMP1Q12904 312 aaKnown RBP25.25■■□□□ 1.63
SMARCA2-227ENST00000634760 ABTB2Q8N961 1025 aa25.25■■□□□ 1.63
SMARCA2-227ENST00000634760 ZNF428Q96B54 188 aa25.25■■□□□ 1.63
SMARCA2-227ENST00000634760 FAM43AQ8N2R8 423 aa25.23■■□□□ 1.63
SMARCA2-227ENST00000634760 SURF6O75683 361 aaKnown RBP25.23■■□□□ 1.63
SMARCA2-227ENST00000634760 SLC3A2P08195 630 aaKnown RBP25.23■■□□□ 1.63
SMARCA2-227ENST00000634760 ZNF396Q96N95 335 aaPredicted RBP25.23■■□□□ 1.63
SMARCA2-227ENST00000634760 PRM3Q9NNZ6 103 aa25.23■■□□□ 1.63
SMARCA2-227ENST00000634760 CCP110O43303 1012 aa25.23■■□□□ 1.63
SMARCA2-227ENST00000634760 RAD21O60216 631 aa25.22■■□□□ 1.63
SMARCA2-227ENST00000634760 PDE4CQ08493 712 aa25.22■■□□□ 1.63
SMARCA2-227ENST00000634760 CDK19Q9BWU1 502 aa25.22■■□□□ 1.63
SMARCA2-227ENST00000634760 CDR1P51861 262 aa25.22■■□□□ 1.63
SMARCA2-227ENST00000634760 CCDC43Q96MW1 224 aaKnown RBP25.22■■□□□ 1.63
SMARCA2-227ENST00000634760 NOB1Q9ULX3 412 aaKnown RBP25.22■■□□□ 1.63
SMARCA2-227ENST00000634760 SRCIN1Q9C0H9 1055 aa25.22■■□□□ 1.63
SMARCA2-227ENST00000634760 TXNDC2Q86VQ3 553 aa25.22■■□□□ 1.63
SMARCA2-227ENST00000634760 RTEL1-TNFRSF6BF6WH68 1400 aa25.21■■□□□ 1.63
SMARCA2-227ENST00000634760 ANKRD1Q15327 319 aa25.21■■□□□ 1.63
SMARCA2-227ENST00000634760 CC2D2AQ9P2K1 1620 aa25.21■■□□□ 1.63
SMARCA2-227ENST00000634760 AEBP1Q8IUX7 1158 aa25.21■■□□□ 1.63
SMARCA2-227ENST00000634760 TATP17735 454 aaPredicted RBP25.2■■□□□ 1.63
SMARCA2-227ENST00000634760 THEMISQ8N1K5 641 aaPredicted RBP25.2■■□□□ 1.63
SMARCA2-227ENST00000634760 NASPP49321 788 aaPredicted RBP25.2■■□□□ 1.62
SMARCA2-227ENST00000634760 FBXW7Q969H0 707 aa25.2■■□□□ 1.62
SMARCA2-227ENST00000634760 KIAA0586Q9BVV6 1533 aa25.2■■□□□ 1.62
SMARCA2-227ENST00000634760 AK7Q96M32 723 aa25.19■■□□□ 1.62
SMARCA2-227ENST00000634760 MAP3K1Q13233 1512 aa25.19■■□□□ 1.62
SMARCA2-227ENST00000634760 MTERF4Q7Z6M4 381 aaKnown RBP25.18■■□□□ 1.62
SMARCA2-227ENST00000634760 EPRSP07814 1512 aaKnown RBP25.18■■□□□ 1.62
SMARCA2-227ENST00000634760 CDCA7LQ96GN5 454 aa25.18■■□□□ 1.62
SMARCA2-227ENST00000634760 MNS1Q8NEH6 495 aa25.18■■□□□ 1.62
SMARCA2-227ENST00000634760 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.18■■□□□ 1.627e-7■■■■■ 31.5
SMARCA2-227ENST00000634760 PIP4K2AP48426 406 aaPredicted RBP25.17■■□□□ 1.62
SMARCA2-227ENST00000634760 TSPY26PQ9H489 355 aa25.17■■□□□ 1.62
SMARCA2-227ENST00000634760 IFT57Q9NWB7 429 aa25.17■■□□□ 1.62
SMARCA2-227ENST00000634760 IQGAP2Q13576 1575 aa25.17■■□□□ 1.62
SMARCA2-227ENST00000634760 CCDC27Q2M243 656 aa25.17■■□□□ 1.62
SMARCA2-227ENST00000634760 CCDC158Q5M9N0 1113 aa25.17■■□□□ 1.62
SMARCA2-227ENST00000634760 NBPF1Q3BBV0 1214 aa25.17■■□□□ 1.62
SMARCA2-227ENST00000634760 POGZQ7Z3K3 1410 aa25.16■■□□□ 1.62
SMARCA2-227ENST00000634760 LRRCC1Q9C099 1032 aa25.16■■□□□ 1.62
SMARCA2-227ENST00000634760 ESCO1Q5FWF5 840 aa25.16■■□□□ 1.62
SMARCA2-227ENST00000634760 TRAK2O60296 914 aa25.15■■□□□ 1.62
SMARCA2-227ENST00000634760 MVPQ14764 893 aaKnown RBP25.15■■□□□ 1.62
SMARCA2-227ENST00000634760 GNL3LQ9NVN8 582 aaKnown RBP25.15■■□□□ 1.62
SMARCA2-227ENST00000634760 SPG7Q9UQ90 795 aa25.15■■□□□ 1.62
SMARCA2-227ENST00000634760 ZNF771Q7L3S4 317 aaPredicted RBP25.15■■□□□ 1.62
SMARCA2-227ENST00000634760 AMER1Q5JTC6 1135 aaPredicted RBP25.15■■□□□ 1.62
SMARCA2-227ENST00000634760 ABCA10Q8WWZ4 1543 aa25.14■■□□□ 1.62
SMARCA2-227ENST00000634760 TTC39AQ5SRH9 613 aa25.14■■□□□ 1.62
SMARCA2-227ENST00000634760 PDIA4P13667 645 aaKnown RBP25.14■■□□□ 1.62
SMARCA2-227ENST00000634760 NBPF8Q3BBV2 869 aa25.14■■□□□ 1.62
SMARCA2-227ENST00000634760 RUFY1Q96T51 708 aa25.14■■□□□ 1.61
SMARCA2-227ENST00000634760 NUTM2GQ5VZR2 741 aa25.13■■□□□ 1.61
SMARCA2-227ENST00000634760 SDF4Q9BRK5 362 aa25.13■■□□□ 1.61
SMARCA2-227ENST00000634760 KIF14Q15058 1648 aa25.13■■□□□ 1.61
SMARCA2-227ENST00000634760 ATF7IPQ6VMQ6 1270 aa25.13■■□□□ 1.61
SMARCA2-227ENST00000634760 KINO60870 393 aaKnown RBP25.13■■□□□ 1.61
SMARCA2-227ENST00000634760 CCDC173Q0VFZ6 552 aa25.13■■□□□ 1.61
SMARCA2-227ENST00000634760 ZSCAN25Q6NSZ9 544 aa25.12■■□□□ 1.61
SMARCA2-227ENST00000634760 FCHSD2O94868 740 aa25.12■■□□□ 1.61
SMARCA2-227ENST00000634760 NEK4P51957 841 aa25.12■■□□□ 1.61
SMARCA2-227ENST00000634760 DNAJC2Q99543 621 aaKnown RBP25.12■■□□□ 1.61
SMARCA2-227ENST00000634760 SLC4A2P04920 1241 aa25.11■■□□□ 1.61
SMARCA2-227ENST00000634760 ERCC4Q92889 916 aaPredicted RBP25.11■■□□□ 1.61
SMARCA2-227ENST00000634760 PTPN23Q9H3S7 1636 aa25.11■■□□□ 1.61
SMARCA2-227ENST00000634760 HDGFL1Q5TGJ6 251 aa25.11■■□□□ 1.61
SMARCA2-227ENST00000634760 JMYQ8N9B5 988 aa25.11■■□□□ 1.61
SMARCA2-227ENST00000634760 CYP46A1Q9Y6A2 500 aa25.11■■□□□ 1.61
SMARCA2-227ENST00000634760 NESP48681 1621 aa25.11■■□□□ 1.61
SMARCA2-227ENST00000634760 TXLNAP40222 546 aa25.11■■□□□ 1.61
SMARCA2-227ENST00000634760 MAP7D2Q96T17 732 aa25.11■■□□□ 1.61
SMARCA2-227ENST00000634760 PCF11O94913 1555 aaKnown RBP25.1■■□□□ 1.61
SMARCA2-227ENST00000634760 FOSBP53539 338 aa25.1■■□□□ 1.61
SMARCA2-227ENST00000634760 SMARCE1Q969G3 411 aa25.1■■□□□ 1.61
SMARCA2-227ENST00000634760 EPS15P42566 896 aa25.1■■□□□ 1.61
SMARCA2-227ENST00000634760 FILIP1LQ4L180 1135 aa25.1■■□□□ 1.61
SMARCA2-227ENST00000634760 CABP1Q9NZU7 370 aa25.09■■□□□ 1.61
SMARCA2-227ENST00000634760 PROSER2Q86WR7 435 aaPredicted RBP25.09■■□□□ 1.61
SMARCA2-227ENST00000634760 SLC12A5Q9H2X9 1139 aa25.08■■□□□ 1.61
SMARCA2-227ENST00000634760 SULT6B1Q6IMI4 303 aa25.08■■□□□ 1.61
SMARCA2-227ENST00000634760 WDR33Q9C0J8 1336 aaKnown RBP25.08■■□□□ 1.61
SMARCA2-227ENST00000634760 K7ELQ4 463 aaPredicted RBP25.07■■□□□ 1.6
SMARCA2-227ENST00000634760 DACH1Q9UI36 760 aa25.07■■□□□ 1.6
SMARCA2-227ENST00000634760 MYO6Q9UM54 1294 aa25.07■■□□□ 1.6
SMARCA2-227ENST00000634760 LAMC3Q9Y6N6 1575 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms