RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 TRPC5Q9UL62 973 aaPredicted RBP22.14■■□□□ 1.14
LINC00339-207ENST00000634712 RBM6P78332 1123 aaKnown RBP22.13■■□□□ 1.13
LINC00339-207ENST00000634712 SBNO2Q9Y2G9 1366 aa22.12■■□□□ 1.13
LINC00339-207ENST00000634712 MARF1Q9Y4F3 1742 aaKnown RBP22.12■■□□□ 1.13
LINC00339-207ENST00000634712 SLC24A1O60721 1099 aa22.12■■□□□ 1.13
LINC00339-207ENST00000634712 ABTB2Q8N961 1025 aa22.12■■□□□ 1.13
LINC00339-207ENST00000634712 ATAD2Q6PL18 1390 aa22.11■■□□□ 1.13
LINC00339-207ENST00000634712 ST20-MTHFSA0A0A6YYL1 179 aa22.11■■□□□ 1.13
LINC00339-207ENST00000634712 NUTM2GQ5VZR2 741 aa22.11■■□□□ 1.13
LINC00339-207ENST00000634712 ALS2Q96Q42 1657 aa22.1■■□□□ 1.13
LINC00339-207ENST00000634712 ZNF692Q9BU19 519 aaPredicted RBP22.1■■□□□ 1.13
LINC00339-207ENST00000634712 BRD4O60885 1362 aaPredicted RBP22.08■■□□□ 1.13
LINC00339-207ENST00000634712 UNC5CLQ8IV45 518 aa22.08■■□□□ 1.12
LINC00339-207ENST00000634712 TMC1Q8TDI8 760 aa22.07■■□□□ 1.12
LINC00339-207ENST00000634712 FAM83GA6ND36 823 aa22.06■■□□□ 1.12
LINC00339-207ENST00000634712 NLRP13Q86W25 1043 aa22.06■■□□□ 1.12
LINC00339-207ENST00000634712 BCL9LQ86UU0 1499 aa22.06■■□□□ 1.12
LINC00339-207ENST00000634712 USP47Q96K76 1375 aa22.04■■□□□ 1.12
LINC00339-207ENST00000634712 ATRNO75882 1429 aa22.04■■□□□ 1.12
LINC00339-207ENST00000634712 USP6P35125 1406 aa22.04■■□□□ 1.12
LINC00339-207ENST00000634712 ABCA3Q99758 1704 aa22.03■■□□□ 1.12
LINC00339-207ENST00000634712 SLIT2O94813 1529 aa22.03■■□□□ 1.12
LINC00339-207ENST00000634712 PUS7Q96PZ0 661 aaKnown RBP22.03■■□□□ 1.12
LINC00339-207ENST00000634712 TESK2Q96S53 571 aa22.03■■□□□ 1.12
LINC00339-207ENST00000634712 PRDM11Q9NQV5 511 aa22.03■■□□□ 1.12
LINC00339-207ENST00000634712 CDK12Q9NYV4 1490 aaPredicted RBP22.03■■□□□ 1.12
LINC00339-207ENST00000634712 GJD4Q96KN9 370 aaPredicted RBP22.02■■□□□ 1.12
LINC00339-207ENST00000634712 CCDC9Q9Y3X0 531 aaKnown RBP22.02■■□□□ 1.12
LINC00339-207ENST00000634712 NLRP6P59044 892 aa22.01■■□□□ 1.11
LINC00339-207ENST00000634712 ZC3H6P61129 1189 aaKnown RBP22.01■■□□□ 1.11
LINC00339-207ENST00000634712 TMF1P82094 1093 aa22■■□□□ 1.11
LINC00339-207ENST00000634712 HDGFL2Q7Z4V5 671 aaPredicted RBP22■■□□□ 1.11
LINC00339-207ENST00000634712 BTG4Q9NY30 223 aa22■■□□□ 1.11
LINC00339-207ENST00000634712 KTN1Q86UP2 1357 aaKnown RBP22■■□□□ 1.11
LINC00339-207ENST00000634712 TTC21BQ7Z4L5 1316 aa21.99■■□□□ 1.11
LINC00339-207ENST00000634712 SLC12A5Q9H2X9 1139 aa21.99■■□□□ 1.11
LINC00339-207ENST00000634712 KIAA0232Q92628 1395 aa21.98■■□□□ 1.11
LINC00339-207ENST00000634712 VPS72Q15906 364 aa21.98■■□□□ 1.11
LINC00339-207ENST00000634712 TERF2IPQ9NYB0 399 aa21.98■■□□□ 1.11
LINC00339-207ENST00000634712 TTC21AQ8NDW8 1320 aa21.97■■□□□ 1.11
LINC00339-207ENST00000634712 GCP02774 474 aa21.97■■□□□ 1.11
LINC00339-207ENST00000634712 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.97■■□□□ 1.11
LINC00339-207ENST00000634712 RGS12O14924 1447 aa21.96■■□□□ 1.11
LINC00339-207ENST00000634712 CPSF1Q10570 1443 aaKnown RBP21.96■■□□□ 1.11
LINC00339-207ENST00000634712 NWD2Q9ULI1 1742 aa21.96■■□□□ 1.11
LINC00339-207ENST00000634712 USP19O94966 1318 aa21.96■■□□□ 1.11
LINC00339-207ENST00000634712 PLCH1Q4KWH8 1693 aa21.96■■□□□ 1.11
LINC00339-207ENST00000634712 CHRNA2Q15822 529 aa21.96■■□□□ 1.11
LINC00339-207ENST00000634712 CDCA8Q53HL2 280 aa21.96■■□□□ 1.11
LINC00339-207ENST00000634712 COL14A1Q05707 1796 aaKnown RBP21.95■■□□□ 1.1
LINC00339-207ENST00000634712 SSH2Q76I76 1423 aa21.95■■□□□ 1.1
LINC00339-207ENST00000634712 CRYBG1Q9Y4K1 1723 aa21.95■■□□□ 1.1
LINC00339-207ENST00000634712 AKAP12Q02952 1782 aa21.94■■□□□ 1.1
LINC00339-207ENST00000634712 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.94■■□□□ 1.1
LINC00339-207ENST00000634712 PHRF1Q9P1Y6 1649 aaKnown RBP21.94■■□□□ 1.1
LINC00339-207ENST00000634712 ZBTB7CA1YPR0 619 aa21.93■■□□□ 1.1
LINC00339-207ENST00000634712 NINLQ9Y2I6 1382 aa21.93■■□□□ 1.1
LINC00339-207ENST00000634712 EVA1CP58658 441 aa21.92■■□□□ 1.1
LINC00339-207ENST00000634712 STRN4Q9NRL3 753 aa21.91■■□□□ 1.1
LINC00339-207ENST00000634712 KCNH5Q8NCM2 988 aa21.9■■□□□ 1.1
LINC00339-207ENST00000634712 EIF4G2P78344 907 aaKnown RBP eCLIP21.89■■□□□ 1.1
LINC00339-207ENST00000634712 CPDO75976 1380 aa21.89■■□□□ 1.1
LINC00339-207ENST00000634712 A0A0G2JS52 829 aa21.88■■□□□ 1.09
LINC00339-207ENST00000634712 SOX12O15370 315 aa21.88■■□□□ 1.09
LINC00339-207ENST00000634712 MYT1Q01538 1121 aa21.88■■□□□ 1.09
LINC00339-207ENST00000634712 CD163L1Q9NR16 1453 aa21.88■■□□□ 1.09
LINC00339-207ENST00000634712 NRKQ7Z2Y5 1582 aa21.88■■□□□ 1.09
LINC00339-207ENST00000634712 A0A1W2PP64 1363 aa21.87■■□□□ 1.09
LINC00339-207ENST00000634712 PIK3C2AO00443 1686 aa21.87■■□□□ 1.09
LINC00339-207ENST00000634712 GLI3P10071 1580 aa21.87■■□□□ 1.09
LINC00339-207ENST00000634712 SEPT12Q8IYM1 358 aa21.87■■□□□ 1.09
LINC00339-207ENST00000634712 UPF1Q92900 1129 aaKnown RBP eCLIP21.87■■□□□ 1.09
LINC00339-207ENST00000634712 MON2Q7Z3U7 1717 aa21.86■■□□□ 1.09
LINC00339-207ENST00000634712 EDC4Q6P2E9 1401 aaKnown RBP21.86■■□□□ 1.09
LINC00339-207ENST00000634712 NME9Q86XW9 330 aa21.86■■□□□ 1.09
LINC00339-207ENST00000634712 SPATA31A5Q5VU36 1347 aa21.85■■□□□ 1.09
LINC00339-207ENST00000634712 SPATA31A7Q8IWB4 1347 aa21.85■■□□□ 1.09
LINC00339-207ENST00000634712 NRAPQ86VF7 1730 aa21.85■■□□□ 1.09
LINC00339-207ENST00000634712 FAM98CQ17RN3 349 aaKnown RBP21.85■■□□□ 1.09
LINC00339-207ENST00000634712 SLIT3O75094 1523 aa21.84■■□□□ 1.09
LINC00339-207ENST00000634712 ONECUT3O60422 494 aaPredicted RBP21.84■■□□□ 1.09
LINC00339-207ENST00000634712 ZRANB1Q9UGI0 708 aa21.84■■□□□ 1.09
LINC00339-207ENST00000634712 HSPA5P11021 654 aaKnown RBP21.83■■□□□ 1.08
LINC00339-207ENST00000634712 POLR3GLQ9BT43 218 aa21.83■■□□□ 1.08
LINC00339-207ENST00000634712 USP31Q70CQ4 1352 aa21.82■■□□□ 1.08
LINC00339-207ENST00000634712 ANKRD36BQ8N2N9 1353 aa21.82■■□□□ 1.08
LINC00339-207ENST00000634712 USP35Q9P2H5 1018 aa21.82■■□□□ 1.08
LINC00339-207ENST00000634712 SPATA31A1Q5TZJ5 1347 aa21.81■■□□□ 1.08
LINC00339-207ENST00000634712 AATKQ6ZMQ8 1374 aa21.81■■□□□ 1.08
LINC00339-207ENST00000634712 CAMTA1Q9Y6Y1 1673 aa21.8■■□□□ 1.08
LINC00339-207ENST00000634712 LARP1Q6PKG0 1096 aaKnown RBP21.8■■□□□ 1.08
LINC00339-207ENST00000634712 ARHGEF25Q86VW2 580 aa21.8■■□□□ 1.08
LINC00339-207ENST00000634712 KRT27Q7Z3Y8 459 aa21.78■■□□□ 1.08
LINC00339-207ENST00000634712 COG3Q96JB2 828 aa21.78■■□□□ 1.08
LINC00339-207ENST00000634712 LMO7Q8WWI1 1683 aa21.76■■□□□ 1.07
LINC00339-207ENST00000634712 CSB-PGBD3P0DP91 1061 aa21.75■■□□□ 1.07
LINC00339-207ENST00000634712 TOM1L2Q6ZVM7 507 aa21.75■■□□□ 1.07
LINC00339-207ENST00000634712 TCP11L2Q8N4U5 519 aa21.75■■□□□ 1.07
LINC00339-207ENST00000634712 AXIN2Q9Y2T1 843 aa21.75■■□□□ 1.07
LINC00339-207ENST00000634712 COL5A2P05997 1499 aaPredicted RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms